RNA–Protein interactions for RNA: ENST00000424953.1

LINC02238-201, Transcript of long intergenic non-protein coding RNA 2238, humanhuman

TSL 5 BASIC

Gene LINC02238, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02238-201ENST00000424953 PBX2P40425 430 aa10.79□□□□□ -0.68
LINC02238-201ENST00000424953 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
LINC02238-201ENST00000424953 SMYD5Q6GMV2 418 aa10.79□□□□□ -0.68
LINC02238-201ENST00000424953 POTEEQ6S8J3 1075 aa10.79□□□□□ -0.68
LINC02238-201ENST00000424953 BCL2L12Q9HB09 334 aa10.79□□□□□ -0.68
LINC02238-201ENST00000424953 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC02238-201ENST00000424953 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
LINC02238-201ENST00000424953 MAP3K7O43318 606 aa10.77□□□□□ -0.69
LINC02238-201ENST00000424953 BCANQ96GW7 911 aa10.77□□□□□ -0.69
LINC02238-201ENST00000424953 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
LINC02238-201ENST00000424953 ARHGAP33O14559 1287 aa10.75□□□□□ -0.69
LINC02238-201ENST00000424953 PTPREP23469 700 aa10.75□□□□□ -0.69
LINC02238-201ENST00000424953 PSEN2P49810 448 aa10.75□□□□□ -0.69
LINC02238-201ENST00000424953 TSR1Q2NL82 804 aaKnown RBP10.75□□□□□ -0.69
LINC02238-201ENST00000424953 C6orf132Q5T0Z8 1188 aa10.75□□□□□ -0.69
LINC02238-201ENST00000424953 RBM26Q5T8P6 1007 aaKnown RBP10.74□□□□□ -0.69
LINC02238-201ENST00000424953 TULP1O00294 542 aaPredicted RBP10.73□□□□□ -0.69
LINC02238-201ENST00000424953 KCNH8Q96L42 1107 aa10.72□□□□□ -0.69
LINC02238-201ENST00000424953 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
LINC02238-201ENST00000424953 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
LINC02238-201ENST00000424953 COL9A1P20849 921 aa10.7□□□□□ -0.7
LINC02238-201ENST00000424953 NUTM2FA1L443 756 aa10.69□□□□□ -0.7
LINC02238-201ENST00000424953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC02238-201ENST00000424953 PPP1R3GB7ZBB8 358 aa10.68□□□□□ -0.7
LINC02238-201ENST00000424953 LMOD2Q6P5Q4 547 aa10.66□□□□□ -0.7
LINC02238-201ENST00000424953 NPDC1Q9NQX5 325 aaPredicted RBP10.66□□□□□ -0.7
LINC02238-201ENST00000424953 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
LINC02238-201ENST00000424953 PTGDRQ13258 359 aa10.63□□□□□ -0.71
LINC02238-201ENST00000424953 GPIHBP1Q8IV16 184 aa10.63□□□□□ -0.71
LINC02238-201ENST00000424953 CERKQ8TCT0 537 aa10.63□□□□□ -0.71
LINC02238-201ENST00000424953 PROX2Q3B8N5 592 aa10.62□□□□□ -0.71
LINC02238-201ENST00000424953 FCHSD2O94868 740 aa10.61□□□□□ -0.71
LINC02238-201ENST00000424953 ADGRD1Q6QNK2 874 aa10.61□□□□□ -0.71
LINC02238-201ENST00000424953 SLC4A5Q9BY07 1137 aa10.61□□□□□ -0.71
LINC02238-201ENST00000424953 VPS9D1Q9Y2B5 631 aa10.61□□□□□ -0.71
LINC02238-201ENST00000424953 TK2O00142 265 aa10.6□□□□□ -0.71
LINC02238-201ENST00000424953 GPR37O15354 613 aa10.6□□□□□ -0.71
LINC02238-201ENST00000424953 PRSS12P56730 875 aa10.6□□□□□ -0.71
LINC02238-201ENST00000424953 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
LINC02238-201ENST00000424953 TRIM6-TRIM34B2RNG4 842 aa10.58□□□□□ -0.72
LINC02238-201ENST00000424953 PADI6Q6TGC4 694 aa10.57□□□□□ -0.72
LINC02238-201ENST00000424953 TSKSQ9UJT2 592 aa10.57□□□□□ -0.72
LINC02238-201ENST00000424953 HIC1Q14526 733 aa10.56□□□□□ -0.72
LINC02238-201ENST00000424953 RBM27Q9P2N5 1060 aaKnown RBP10.56□□□□□ -0.72
LINC02238-201ENST00000424953 FAM198AQ9UFP1 575 aa10.56□□□□□ -0.72
LINC02238-201ENST00000424953 HRO43593 1189 aa10.55□□□□□ -0.72
LINC02238-201ENST00000424953 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
LINC02238-201ENST00000424953 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
LINC02238-201ENST00000424953 KIAA1468Q9P260 1216 aa10.55□□□□□ -0.72
LINC02238-201ENST00000424953 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
LINC02238-201ENST00000424953 GNPATO15228 680 aa10.54□□□□□ -0.72
LINC02238-201ENST00000424953 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
LINC02238-201ENST00000424953 HCSTQ9UBK5 93 aa10.54□□□□□ -0.72
LINC02238-201ENST00000424953 FECHP22830 423 aa10.53□□□□□ -0.72
LINC02238-201ENST00000424953 ZC3H15Q8WU90 426 aaKnown RBP10.53□□□□□ -0.72
LINC02238-201ENST00000424953 BHMG1C9JSJ3 638 aaPredicted RBP10.52□□□□□ -0.73
LINC02238-201ENST00000424953 PACS2Q86VP3 889 aa10.52□□□□□ -0.73
LINC02238-201ENST00000424953 C3orf80F5H4A9 247 aa10.5□□□□□ -0.73
LINC02238-201ENST00000424953 NBPF3Q9H094 633 aa10.5□□□□□ -0.73
LINC02238-201ENST00000424953 SEPT9Q9UHD8 586 aaPredicted RBP10.49□□□□□ -0.73
LINC02238-201ENST00000424953 PNMA3Q9UL41 463 aa10.49□□□□□ -0.73
LINC02238-201ENST00000424953 NBPF26B4DH59 902 aa10.48□□□□□ -0.73
LINC02238-201ENST00000424953 SMAPO00193 183 aa10.48□□□□□ -0.73
LINC02238-201ENST00000424953 FAM161AQ3B820 660 aa10.48□□□□□ -0.73
LINC02238-201ENST00000424953 NUDT18Q6ZVK8 323 aa10.48□□□□□ -0.73
LINC02238-201ENST00000424953 MRPL50Q8N5N7 158 aaKnown RBP10.48□□□□□ -0.73
LINC02238-201ENST00000424953 TATDN2Q93075 761 aa10.48□□□□□ -0.73
LINC02238-201ENST00000424953 ZMYND10O75800 440 aa10.47□□□□□ -0.73
LINC02238-201ENST00000424953 ADGRG1Q9Y653 693 aa10.46□□□□□ -0.73
LINC02238-201ENST00000424953 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
LINC02238-201ENST00000424953 MAP2K5Q13163 448 aa10.44□□□□□ -0.74
LINC02238-201ENST00000424953 KCTD12Q96CX2 325 aaKnown RBP10.44□□□□□ -0.74
LINC02238-201ENST00000424953 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
LINC02238-201ENST00000424953 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
LINC02238-201ENST00000424953 LAPTM4BQ86VI4 370 aa10.43□□□□□ -0.74
LINC02238-201ENST00000424953 EYA1Q99502 592 aa10.43□□□□□ -0.74
LINC02238-201ENST00000424953 KRI1Q8N9T8 703 aaKnown RBP10.42□□□□□ -0.74
LINC02238-201ENST00000424953 MINK1Q8N4C8 1332 aaPredicted RBP10.41□□□□□ -0.74
LINC02238-201ENST00000424953 GOLGA8CPA6NN73 597 aa10.41□□□□□ -0.74
LINC02238-201ENST00000424953 IRF6O14896 467 aa10.41□□□□□ -0.74
LINC02238-201ENST00000424953 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
LINC02238-201ENST00000424953 OATP04181 439 aa10.4□□□□□ -0.74
LINC02238-201ENST00000424953 PXYLP1Q8TE99 480 aa10.4□□□□□ -0.74
LINC02238-201ENST00000424953 ZFRQ96KR1 1074 aaKnown RBP10.4□□□□□ -0.74
LINC02238-201ENST00000424953 METTL3Q86U44 580 aaKnown RBP10.39□□□□□ -0.75
LINC02238-201ENST00000424953 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
LINC02238-201ENST00000424953 TPRNQ4KMQ1 711 aa10.37□□□□□ -0.75
LINC02238-201ENST00000424953 WNT2BQ93097 391 aa10.37□□□□□ -0.75
LINC02238-201ENST00000424953 RCCD1A6NED2 376 aa10.36□□□□□ -0.75
LINC02238-201ENST00000424953 DNAJB2P25686 324 aa10.35□□□□□ -0.75
LINC02238-201ENST00000424953 SAMD7Q7Z3H4 446 aa10.35□□□□□ -0.75
LINC02238-201ENST00000424953 ANKK1Q8NFD2 765 aa10.35□□□□□ -0.75
LINC02238-201ENST00000424953 PHOX2BQ99453 314 aa10.35□□□□□ -0.75
LINC02238-201ENST00000424953 SLC24A3Q9HC58 644 aa10.35□□□□□ -0.75
LINC02238-201ENST00000424953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
LINC02238-201ENST00000424953 PTPN5P54829 565 aa10.34□□□□□ -0.75
LINC02238-201ENST00000424953 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
LINC02238-201ENST00000424953 SWT1Q5T5J6 900 aaKnown RBP10.33□□□□□ -0.76
LINC02238-201ENST00000424953 BCAMP50895 628 aa10.32□□□□□ -0.76
LINC02238-201ENST00000424953 HDGFP51858 240 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms