RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 PHF14O94880 888 aa8.93□□□□□ -0.98
SDCBPP2-201ENST00000424643 TYW1BQ6NUM6 668 aa8.93□□□□□ -0.98
SDCBPP2-201ENST00000424643 NBR1Q14596 966 aa8.92□□□□□ -0.98
SDCBPP2-201ENST00000424643 SPDYE16A6NNV3 312 aaPredicted RBP8.91□□□□□ -0.98
SDCBPP2-201ENST00000424643 RBM33Q96EV2 1170 aaKnown RBP8.91□□□□□ -0.98
SDCBPP2-201ENST00000424643 TK2O00142 265 aa8.9□□□□□ -0.98
SDCBPP2-201ENST00000424643 ARIH1Q9Y4X5 557 aaPredicted RBP8.9□□□□□ -0.98
SDCBPP2-201ENST00000424643 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
SDCBPP2-201ENST00000424643 FBXW7Q969H0 707 aa8.89□□□□□ -0.99
SDCBPP2-201ENST00000424643 VPS9D1Q9Y2B5 631 aa8.89□□□□□ -0.99
SDCBPP2-201ENST00000424643 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
SDCBPP2-201ENST00000424643 HRO43593 1189 aa8.88□□□□□ -0.99
SDCBPP2-201ENST00000424643 EPAS1Q99814 870 aa8.88□□□□□ -0.99
SDCBPP2-201ENST00000424643 COL9A1P20849 921 aa8.87□□□□□ -0.99
SDCBPP2-201ENST00000424643 C6orf132Q5T0Z8 1188 aa8.87□□□□□ -0.99
SDCBPP2-201ENST00000424643 ZBED2Q9BTP6 218 aa8.86□□□□□ -0.99
SDCBPP2-201ENST00000424643 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
SDCBPP2-201ENST00000424643 STAC3Q96MF2 364 aa8.85□□□□□ -0.99
SDCBPP2-201ENST00000424643 PPP1R3GB7ZBB8 358 aa8.84□□□□□ -0.99
SDCBPP2-201ENST00000424643 MAP3K7O43318 606 aa8.84□□□□□ -0.99
SDCBPP2-201ENST00000424643 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
SDCBPP2-201ENST00000424643 PROX2Q3B8N5 592 aa8.84□□□□□ -0.99
SDCBPP2-201ENST00000424643 SLC4A5Q9BY07 1137 aa8.84□□□□□ -0.99
SDCBPP2-201ENST00000424643 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
SDCBPP2-201ENST00000424643 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
SDCBPP2-201ENST00000424643 OSBPP22059 807 aa8.81□□□□□ -1
SDCBPP2-201ENST00000424643 BHMG1C9JSJ3 638 aaPredicted RBP8.8□□□□□ -1
SDCBPP2-201ENST00000424643 MLLT3P42568 568 aaPredicted RBP8.8□□□□□ -1
SDCBPP2-201ENST00000424643 KCTD12Q96CX2 325 aaKnown RBP8.79□□□□□ -1
SDCBPP2-201ENST00000424643 P3H3Q8IVL6 736 aa8.78□□□□□ -1
SDCBPP2-201ENST00000424643 KIAA1468Q9P260 1216 aa8.78□□□□□ -1
SDCBPP2-201ENST00000424643 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
SDCBPP2-201ENST00000424643 CDHR5Q9HBB8 845 aa8.76□□□□□ -1.01
SDCBPP2-201ENST00000424643 RABGEF1Q9UJ41 708 aa8.76□□□□□ -1.01
SDCBPP2-201ENST00000424643 SEMA3EO15041 775 aa8.75□□□□□ -1.01
SDCBPP2-201ENST00000424643 NBPF3Q9H094 633 aa8.75□□□□□ -1.01
SDCBPP2-201ENST00000424643 GOLGA8CPA6NN73 597 aa8.74□□□□□ -1.01
SDCBPP2-201ENST00000424643 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
SDCBPP2-201ENST00000424643 SEPT9Q9UHD8 586 aaPredicted RBP8.73□□□□□ -1.01
SDCBPP2-201ENST00000424643 WNT2BQ93097 391 aa8.72□□□□□ -1.01
SDCBPP2-201ENST00000424643 CDCA7LQ96GN5 454 aa8.72□□□□□ -1.01
SDCBPP2-201ENST00000424643 TSKSQ9UJT2 592 aa8.72□□□□□ -1.01
SDCBPP2-201ENST00000424643 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.02
SDCBPP2-201ENST00000424643 PTPN5P54829 565 aa8.71□□□□□ -1.02
SDCBPP2-201ENST00000424643 PRSS12P56730 875 aa8.7□□□□□ -1.02
SDCBPP2-201ENST00000424643 FAM198AQ9UFP1 575 aa8.7□□□□□ -1.02
SDCBPP2-201ENST00000424643 PACS2Q86VP3 889 aa8.69□□□□□ -1.02
SDCBPP2-201ENST00000424643 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
SDCBPP2-201ENST00000424643 NPDC1Q9NQX5 325 aaPredicted RBP8.69□□□□□ -1.02
SDCBPP2-201ENST00000424643 SMAPO00193 183 aa8.68□□□□□ -1.02
SDCBPP2-201ENST00000424643 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
SDCBPP2-201ENST00000424643 C3orf80F5H4A9 247 aa8.67□□□□□ -1.02
SDCBPP2-201ENST00000424643 RGS20O76081 388 aa8.67□□□□□ -1.02
SDCBPP2-201ENST00000424643 ZFRQ96KR1 1074 aaKnown RBP8.67□□□□□ -1.02
SDCBPP2-201ENST00000424643 NUTM2FA1L443 756 aa8.66□□□□□ -1.02
SDCBPP2-201ENST00000424643 LAPTM4BQ86VI4 370 aa8.66□□□□□ -1.02
SDCBPP2-201ENST00000424643 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
SDCBPP2-201ENST00000424643 BCAMP50895 628 aa8.65□□□□□ -1.02
SDCBPP2-201ENST00000424643 FAM98CQ17RN3 349 aaKnown RBP8.65□□□□□ -1.02
SDCBPP2-201ENST00000424643 IFFO2Q5TF58 517 aa8.65□□□□□ -1.02
SDCBPP2-201ENST00000424643 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
SDCBPP2-201ENST00000424643 PADI6Q6TGC4 694 aa8.64□□□□□ -1.03
SDCBPP2-201ENST00000424643 TATDN2Q93075 761 aa8.64□□□□□ -1.03
SDCBPP2-201ENST00000424643 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
SDCBPP2-201ENST00000424643 RBM26Q5T8P6 1007 aaKnown RBP8.63□□□□□ -1.03
SDCBPP2-201ENST00000424643 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
SDCBPP2-201ENST00000424643 PTGDRQ13258 359 aa8.62□□□□□ -1.03
SDCBPP2-201ENST00000424643 SOWAHBA6NEL2 793 aa8.61□□□□□ -1.03
SDCBPP2-201ENST00000424643 TTC13Q8NBP0 860 aa8.61□□□□□ -1.03
SDCBPP2-201ENST00000424643 NBPF26B4DH59 902 aa8.6□□□□□ -1.03
SDCBPP2-201ENST00000424643 IRX2Q9BZI1 471 aaPredicted RBP8.6□□□□□ -1.03
SDCBPP2-201ENST00000424643 RBM27Q9P2N5 1060 aaKnown RBP8.6□□□□□ -1.03
SDCBPP2-201ENST00000424643 A0A0G2JS52 829 aa8.59□□□□□ -1.03
SDCBPP2-201ENST00000424643 SMYD5Q6GMV2 418 aa8.59□□□□□ -1.03
SDCBPP2-201ENST00000424643 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
SDCBPP2-201ENST00000424643 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
SDCBPP2-201ENST00000424643 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
SDCBPP2-201ENST00000424643 WBP1LQ9NX94 342 aa8.58□□□□□ -1.04
SDCBPP2-201ENST00000424643 FCHSD2O94868 740 aa8.57□□□□□ -1.04
SDCBPP2-201ENST00000424643 FAM161AQ3B820 660 aa8.57□□□□□ -1.04
SDCBPP2-201ENST00000424643 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
SDCBPP2-201ENST00000424643 EYA1Q99502 592 aa8.55□□□□□ -1.04
SDCBPP2-201ENST00000424643 TSR3Q9UJK0 312 aaKnown RBP8.55□□□□□ -1.04
SDCBPP2-201ENST00000424643 LMOD2Q6P5Q4 547 aa8.54□□□□□ -1.04
SDCBPP2-201ENST00000424643 RNF40O75150 1001 aa8.53□□□□□ -1.04
SDCBPP2-201ENST00000424643 PPP4CP60510 307 aa8.53□□□□□ -1.04
SDCBPP2-201ENST00000424643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.53□□□□□ -1.04
SDCBPP2-201ENST00000424643 FECHP22830 423 aa8.52□□□□□ -1.05
SDCBPP2-201ENST00000424643 HDGFP51858 240 aaKnown RBP8.52□□□□□ -1.05
SDCBPP2-201ENST00000424643 SWT1Q5T5J6 900 aaKnown RBP8.52□□□□□ -1.05
SDCBPP2-201ENST00000424643 ADGRG1Q9Y653 693 aa8.52□□□□□ -1.05
SDCBPP2-201ENST00000424643 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
SDCBPP2-201ENST00000424643 GPR37O15354 613 aa8.5□□□□□ -1.05
SDCBPP2-201ENST00000424643 HIC1Q14526 733 aa8.5□□□□□ -1.05
SDCBPP2-201ENST00000424643 RBM46Q8TBY0 533 aaKnown RBP8.49□□□□□ -1.05
SDCBPP2-201ENST00000424643 GNPATO15228 680 aa8.48□□□□□ -1.05
SDCBPP2-201ENST00000424643 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
SDCBPP2-201ENST00000424643 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
SDCBPP2-201ENST00000424643 NISCHQ9Y2I1 1504 aa8.48□□□□□ -1.05
SDCBPP2-201ENST00000424643 RCCD1A6NED2 376 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms