RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 DHX29Q7Z478 1369 aaKnown RBP8.62□□□□□ -1.03
ATP2C1-203ENST00000422190 BCORL1Q5H9F3 1711 aa8.61□□□□□ -1.03
ATP2C1-203ENST00000422190 AFAP1Q8N556 730 aa8.61□□□□□ -1.03
ATP2C1-203ENST00000422190 ARHGEF12Q9NZN5 1544 aa8.61□□□□□ -1.03
ATP2C1-203ENST00000422190 PLCH2O75038 1416 aa8.61□□□□□ -1.03
ATP2C1-203ENST00000422190 ARID4BQ4LE39 1312 aaPredicted RBP8.6□□□□□ -1.03
ATP2C1-203ENST00000422190 KDM5CP41229 1560 aa8.6□□□□□ -1.03
ATP2C1-203ENST00000422190 SPAG9O60271 1321 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-203ENST00000422190 TMC1Q8TDI8 760 aa8.59□□□□□ -1.03
ATP2C1-203ENST00000422190 ZBED9Q6R2W3 1325 aa8.59□□□□□ -1.03
ATP2C1-203ENST00000422190 TRAPPC8Q9Y2L5 1435 aa8.59□□□□□ -1.03
ATP2C1-203ENST00000422190 PLA2R1Q13018 1463 aa8.59□□□□□ -1.03
ATP2C1-203ENST00000422190 MYO5CQ9NQX4 1742 aa8.58□□□□□ -1.04
ATP2C1-203ENST00000422190 PRAG1Q86YV5 1406 aa8.57□□□□□ -1.04
ATP2C1-203ENST00000422190 ZCCHC11Q5TAX3 1644 aaKnown RBP8.57□□□□□ -1.04
ATP2C1-203ENST00000422190 MAST1Q9Y2H9 1570 aa8.57□□□□□ -1.04
ATP2C1-203ENST00000422190 CLASP1Q7Z460 1538 aa8.57□□□□□ -1.04
ATP2C1-203ENST00000422190 DUOX2Q9NRD8 1548 aa8.56□□□□□ -1.04
ATP2C1-203ENST00000422190 POLR1AO95602 1720 aaPredicted RBP8.56□□□□□ -1.04
ATP2C1-203ENST00000422190 UHRF1BP1LA0JNW5 1464 aa8.56□□□□□ -1.04
ATP2C1-203ENST00000422190 A2MP01023 1474 aa8.56□□□□□ -1.04
ATP2C1-203ENST00000422190 PNISRQ8TF01 805 aaKnown RBP8.55□□□□□ -1.04
ATP2C1-203ENST00000422190 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
ATP2C1-203ENST00000422190 UNC13BO14795 1591 aa8.54□□□□□ -1.04
ATP2C1-203ENST00000422190 KIF3BO15066 747 aa8.54□□□□□ -1.04
ATP2C1-203ENST00000422190 PLXNC1O60486 1568 aa8.54□□□□□ -1.04
ATP2C1-203ENST00000422190 RALBP1Q15311 655 aa8.54□□□□□ -1.04
ATP2C1-203ENST00000422190 MYBBP1AQ9BQG0 1328 aaKnown RBP8.53□□□□□ -1.04
ATP2C1-203ENST00000422190 ABCC1P33527 1531 aa8.53□□□□□ -1.04
ATP2C1-203ENST00000422190 CC2D1BQ5T0F9 858 aaKnown RBP8.53□□□□□ -1.04
ATP2C1-203ENST00000422190 SALL2Q9Y467 1007 aaPredicted RBP8.53□□□□□ -1.04
ATP2C1-203ENST00000422190 PPP4R2Q9NY27 417 aa8.53□□□□□ -1.04
ATP2C1-203ENST00000422190 TESK2Q96S53 571 aa8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 IQGAP3Q86VI3 1631 aa8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 TMF1P82094 1093 aa8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 B4GALNT3Q6L9W6 998 aa8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 PANK3Q9H999 370 aa8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 RBM19Q9Y4C8 960 aaKnown RBP8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 SCAPERQ9BY12 1400 aa8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 GPRASP1Q5JY77 1395 aa8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 DISP3Q9P2K9 1392 aa8.52□□□□□ -1.05
ATP2C1-203ENST00000422190 WDR7Q9Y4E6 1490 aa8.51□□□□□ -1.05
ATP2C1-203ENST00000422190 KTN1Q86UP2 1357 aaKnown RBP8.51□□□□□ -1.05
ATP2C1-203ENST00000422190 NPM1P06748 294 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATP2C1-203ENST00000422190 NUDCQ9Y266 331 aa8.51□□□□□ -1.05
ATP2C1-203ENST00000422190 FANCAO15360 1455 aa8.51□□□□□ -1.05
ATP2C1-203ENST00000422190 TRPM1Q7Z4N2 1603 aa8.5□□□□□ -1.05
ATP2C1-203ENST00000422190 ERICH6BQ5W0A0 696 aa8.5□□□□□ -1.05
ATP2C1-203ENST00000422190 BRD4O60885 1362 aaPredicted RBP8.5□□□□□ -1.05
ATP2C1-203ENST00000422190 PER1O15534 1290 aaPredicted RBP8.5□□□□□ -1.05
ATP2C1-203ENST00000422190 NLRP13Q86W25 1043 aa8.5□□□□□ -1.05
ATP2C1-203ENST00000422190 KANK1Q14678 1352 aa8.5□□□□□ -1.05
ATP2C1-203ENST00000422190 RTEL1-TNFRSF6BF6WH68 1400 aa8.5□□□□□ -1.05
ATP2C1-203ENST00000422190 MAGI2Q86UL8 1455 aa8.5□□□□□ -1.05
ATP2C1-203ENST00000422190 ATP10AO60312 1499 aa8.49□□□□□ -1.05
ATP2C1-203ENST00000422190 SMG6Q86US8 1419 aaKnown RBP8.49□□□□□ -1.05
ATP2C1-203ENST00000422190 ASXL2Q76L83 1435 aa8.48□□□□□ -1.05
ATP2C1-203ENST00000422190 ADGRL1O94910 1474 aa8.48□□□□□ -1.05
ATP2C1-203ENST00000422190 ZFYVE16Q7Z3T8 1539 aa8.48□□□□□ -1.05
ATP2C1-203ENST00000422190 OSCARQ8IYS5 282 aa8.48□□□□□ -1.05
ATP2C1-203ENST00000422190 COL17A1Q9UMD9 1497 aaPredicted RBP8.47□□□□□ -1.05
ATP2C1-203ENST00000422190 CHGAP10645 457 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-203ENST00000422190 PARD3Q8TEW0 1356 aa8.47□□□□□ -1.05
ATP2C1-203ENST00000422190 PRDM15P57071 1507 aaPredicted RBP8.46□□□□□ -1.05
ATP2C1-203ENST00000422190 LRPPRCP42704 1394 aaKnown RBP8.46□□□□□ -1.05
ATP2C1-203ENST00000422190 ATP7AQ04656 1500 aa8.46□□□□□ -1.05
ATP2C1-203ENST00000422190 ARAP3Q8WWN8 1544 aa8.46□□□□□ -1.06
ATP2C1-203ENST00000422190 GGT6Q6P531 493 aa8.45□□□□□ -1.06
ATP2C1-203ENST00000422190 KNSTRNQ9Y448 316 aa8.45□□□□□ -1.06
ATP2C1-203ENST00000422190 E9PCH4 1651 aa8.45□□□□□ -1.06
ATP2C1-203ENST00000422190 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
ATP2C1-203ENST00000422190 EIF2AK4Q9P2K8 1649 aaKnown RBP8.45□□□□□ -1.06
ATP2C1-203ENST00000422190 PTPRTO14522 1441 aa8.45□□□□□ -1.06
ATP2C1-203ENST00000422190 WASHC2CQ9Y4E1 1318 aa8.44□□□□□ -1.06
ATP2C1-203ENST00000422190 CCDC136Q96JN2 1154 aa8.44□□□□□ -1.06
ATP2C1-203ENST00000422190 STAC3Q96MF2 364 aa8.44□□□□□ -1.06
ATP2C1-203ENST00000422190 ADGRF5Q8IZF2 1346 aa8.43□□□□□ -1.06
ATP2C1-203ENST00000422190 TRPM2O94759 1503 aa8.43□□□□□ -1.06
ATP2C1-203ENST00000422190 CDCA8Q53HL2 280 aa8.43□□□□□ -1.06
ATP2C1-203ENST00000422190 CDCA7LQ96GN5 454 aa8.43□□□□□ -1.06
ATP2C1-203ENST00000422190 ABCA9Q8IUA7 1624 aa8.43□□□□□ -1.06
ATP2C1-203ENST00000422190 CLTCL1P53675 1640 aa8.42□□□□□ -1.06
ATP2C1-203ENST00000422190 UGGT1Q9NYU2 1555 aa8.42□□□□□ -1.06
ATP2C1-203ENST00000422190 SCAF11Q99590 1463 aaKnown RBP8.42□□□□□ -1.06
ATP2C1-203ENST00000422190 LAMC1P11047 1609 aa8.42□□□□□ -1.06
ATP2C1-203ENST00000422190 CD109Q6YHK3 1445 aa8.42□□□□□ -1.06
ATP2C1-203ENST00000422190 RNF123Q5XPI4 1314 aa8.42□□□□□ -1.06
ATP2C1-203ENST00000422190 RCAN3Q9UKA8 241 aa8.41□□□□□ -1.06
ATP2C1-203ENST00000422190 INO80Q9ULG1 1556 aaPredicted RBP8.41□□□□□ -1.06
ATP2C1-203ENST00000422190 MADDQ8WXG6 1647 aa8.41□□□□□ -1.06
ATP2C1-203ENST00000422190 RAPGEF3O95398 923 aa8.41□□□□□ -1.06
ATP2C1-203ENST00000422190 PPP2R1AP30153 589 aa8.41□□□□□ -1.06
ATP2C1-203ENST00000422190 MYT1Q01538 1121 aa8.41□□□□□ -1.06
ATP2C1-203ENST00000422190 ADAMTS8Q9UP79 889 aa8.41□□□□□ -1.06
ATP2C1-203ENST00000422190 TET3O43151 1660 aa8.41□□□□□ -1.06
ATP2C1-203ENST00000422190 SPHKAPQ2M3C7 1700 aa8.4□□□□□ -1.06
ATP2C1-203ENST00000422190 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
ATP2C1-203ENST00000422190 EIF3AQ14152 1382 aaKnown RBP8.4□□□□□ -1.06
ATP2C1-203ENST00000422190 WDR43Q15061 677 aaKnown RBP eCLIP8.4□□□□□ -1.07
ATP2C1-203ENST00000422190 ZNF518AQ6AHZ1 1483 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms