RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 PHF14O94880 888 aa9.11□□□□□ -0.95
PTP4A1P1-201ENST00000420539 EPAS1Q99814 870 aa9.11□□□□□ -0.95
PTP4A1P1-201ENST00000420539 ARID3AQ99856 593 aa9.11□□□□□ -0.95
PTP4A1P1-201ENST00000420539 CDHR5Q9HBB8 845 aa9.11□□□□□ -0.95
PTP4A1P1-201ENST00000420539 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
PTP4A1P1-201ENST00000420539 EN1Q05925 392 aaPredicted RBP9.1□□□□□ -0.95
PTP4A1P1-201ENST00000420539 ZNF454Q8N9F8 522 aa9.1□□□□□ -0.95
PTP4A1P1-201ENST00000420539 AK7Q96M32 723 aa9.1□□□□□ -0.95
PTP4A1P1-201ENST00000420539 FECHP22830 423 aa9.09□□□□□ -0.95
PTP4A1P1-201ENST00000420539 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
PTP4A1P1-201ENST00000420539 TYW1BQ6NUM6 668 aa9.09□□□□□ -0.95
PTP4A1P1-201ENST00000420539 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
PTP4A1P1-201ENST00000420539 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
PTP4A1P1-201ENST00000420539 GNPATO15228 680 aa9.08□□□□□ -0.96
PTP4A1P1-201ENST00000420539 GPR153Q6NV75 609 aa9.08□□□□□ -0.96
PTP4A1P1-201ENST00000420539 PTGDRQ13258 359 aa9.07□□□□□ -0.96
PTP4A1P1-201ENST00000420539 HIC1Q14526 733 aa9.07□□□□□ -0.96
PTP4A1P1-201ENST00000420539 ZSWIM6Q9HCJ5 1215 aa9.07□□□□□ -0.96
PTP4A1P1-201ENST00000420539 FOSBP53539 338 aa9.06□□□□□ -0.96
PTP4A1P1-201ENST00000420539 FAM163AQ96GL9 167 aaPredicted RBP9.06□□□□□ -0.96
PTP4A1P1-201ENST00000420539 LHX6Q9UPM6 363 aa9.06□□□□□ -0.96
PTP4A1P1-201ENST00000420539 SNPHO15079 494 aa9.05□□□□□ -0.96
PTP4A1P1-201ENST00000420539 MAP2K5Q13163 448 aa9.05□□□□□ -0.96
PTP4A1P1-201ENST00000420539 FBXW7Q969H0 707 aa9.05□□□□□ -0.96
PTP4A1P1-201ENST00000420539 ZDHHC16Q969W1 377 aa9.05□□□□□ -0.96
PTP4A1P1-201ENST00000420539 CCDC102AQ96A19 550 aa9.05□□□□□ -0.96
PTP4A1P1-201ENST00000420539 GPBP1L1Q9HC44 474 aaPredicted RBP9.04□□□□□ -0.96
PTP4A1P1-201ENST00000420539 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
PTP4A1P1-201ENST00000420539 TRIM66O15016 1216 aa9.03□□□□□ -0.96
PTP4A1P1-201ENST00000420539 EIF5BO60841 1220 aaKnown RBP9.03□□□□□ -0.96
PTP4A1P1-201ENST00000420539 ADAM33Q9BZ11 813 aa9.03□□□□□ -0.96
PTP4A1P1-201ENST00000420539 C1orf115Q9H7X2 142 aa9.03□□□□□ -0.96
PTP4A1P1-201ENST00000420539 IRF6O14896 467 aa9.02□□□□□ -0.97
PTP4A1P1-201ENST00000420539 PDIA4P13667 645 aaKnown RBP9.02□□□□□ -0.97
PTP4A1P1-201ENST00000420539 NPDC1Q9NQX5 325 aaPredicted RBP9.02□□□□□ -0.97
PTP4A1P1-201ENST00000420539 PDE4DQ08499 809 aa9.01□□□□□ -0.97
PTP4A1P1-201ENST00000420539 C6orf132Q5T0Z8 1188 aa9.01□□□□□ -0.97
PTP4A1P1-201ENST00000420539 PPP4R3BQ5MIZ7 849 aa9□□□□□ -0.97
PTP4A1P1-201ENST00000420539 NECTIN2Q92692 538 aa9□□□□□ -0.97
PTP4A1P1-201ENST00000420539 ST18O60284 1047 aa8.98□□□□□ -0.97
PTP4A1P1-201ENST00000420539 HOXB1P14653 301 aaPredicted RBP8.98□□□□□ -0.97
PTP4A1P1-201ENST00000420539 FAM161AQ3B820 660 aa8.98□□□□□ -0.97
PTP4A1P1-201ENST00000420539 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.98
PTP4A1P1-201ENST00000420539 PADI6Q6TGC4 694 aa8.96□□□□□ -0.98
PTP4A1P1-201ENST00000420539 KDM4CQ9H3R0 1056 aa8.96□□□□□ -0.98
PTP4A1P1-201ENST00000420539 PLSCR2Q9NRY7 297 aa8.96□□□□□ -0.98
PTP4A1P1-201ENST00000420539 SHROOM4Q9ULL8 1493 aa8.96□□□□□ -0.98
PTP4A1P1-201ENST00000420539 TTLL12Q14166 644 aaPredicted RBP8.95□□□□□ -0.98
PTP4A1P1-201ENST00000420539 PSDA5PKW4 1024 aaPredicted RBP8.94□□□□□ -0.98
PTP4A1P1-201ENST00000420539 COL9A1P20849 921 aa8.93□□□□□ -0.98
PTP4A1P1-201ENST00000420539 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
PTP4A1P1-201ENST00000420539 CERKQ8TCT0 537 aa8.93□□□□□ -0.98
PTP4A1P1-201ENST00000420539 IGSF3O75054 1194 aa8.92□□□□□ -0.98
PTP4A1P1-201ENST00000420539 PTPREP23469 700 aa8.92□□□□□ -0.98
PTP4A1P1-201ENST00000420539 AMHR2Q16671 573 aa8.92□□□□□ -0.98
PTP4A1P1-201ENST00000420539 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
PTP4A1P1-201ENST00000420539 NLRP7Q8WX94 980 aa8.92□□□□□ -0.98
PTP4A1P1-201ENST00000420539 BCL2L12Q9HB09 334 aa8.92□□□□□ -0.98
PTP4A1P1-201ENST00000420539 ERBB3P21860 1342 aa8.91□□□□□ -0.98
PTP4A1P1-201ENST00000420539 PRSS12P56730 875 aa8.91□□□□□ -0.98
PTP4A1P1-201ENST00000420539 CDCA7LQ96GN5 454 aa8.91□□□□□ -0.98
PTP4A1P1-201ENST00000420539 KCNK17Q96T54 332 aa8.91□□□□□ -0.98
PTP4A1P1-201ENST00000420539 ARID3CA6NKF2 412 aa8.9□□□□□ -0.98
PTP4A1P1-201ENST00000420539 MDM2Q00987 491 aaPredicted RBP8.9□□□□□ -0.98
PTP4A1P1-201ENST00000420539 MARVELD3Q96A59 401 aa8.9□□□□□ -0.98
PTP4A1P1-201ENST00000420539 VARS2Q5ST30 1063 aaKnown RBP8.89□□□□□ -0.99
PTP4A1P1-201ENST00000420539 PHOX2BQ99453 314 aa8.89□□□□□ -0.99
PTP4A1P1-201ENST00000420539 PPP1R3GB7ZBB8 358 aa8.88□□□□□ -0.99
PTP4A1P1-201ENST00000420539 EMP3P54852 163 aa8.88□□□□□ -0.99
PTP4A1P1-201ENST00000420539 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
PTP4A1P1-201ENST00000420539 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
PTP4A1P1-201ENST00000420539 POTEMA6NI47 508 aa8.87□□□□□ -0.99
PTP4A1P1-201ENST00000420539 APBB1O00213 710 aa8.87□□□□□ -0.99
PTP4A1P1-201ENST00000420539 POTEGQ6S5H5 508 aa8.87□□□□□ -0.99
PTP4A1P1-201ENST00000420539 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
PTP4A1P1-201ENST00000420539 METTL3Q86U44 580 aaKnown RBP8.87□□□□□ -0.99
PTP4A1P1-201ENST00000420539 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
PTP4A1P1-201ENST00000420539 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
PTP4A1P1-201ENST00000420539 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
PTP4A1P1-201ENST00000420539 OATP04181 439 aa8.86□□□□□ -0.99
PTP4A1P1-201ENST00000420539 PROX2Q3B8N5 592 aa8.86□□□□□ -0.99
PTP4A1P1-201ENST00000420539 RBM27Q9P2N5 1060 aaKnown RBP8.86□□□□□ -0.99
PTP4A1P1-201ENST00000420539 TSKSQ9UJT2 592 aa8.86□□□□□ -0.99
PTP4A1P1-201ENST00000420539 PSEN2P49810 448 aa8.85□□□□□ -0.99
PTP4A1P1-201ENST00000420539 KCTD17Q8N5Z5 321 aa8.85□□□□□ -0.99
PTP4A1P1-201ENST00000420539 TTC13Q8NBP0 860 aa8.85□□□□□ -0.99
PTP4A1P1-201ENST00000420539 PXYLP1Q8TE99 480 aa8.85□□□□□ -0.99
PTP4A1P1-201ENST00000420539 FAM205CA6NFA0 338 aa8.84□□□□□ -0.99
PTP4A1P1-201ENST00000420539 CLCN1P35523 988 aa8.84□□□□□ -0.99
PTP4A1P1-201ENST00000420539 RBM46Q8TBY0 533 aaKnown RBP8.84□□□□□ -0.99
PTP4A1P1-201ENST00000420539 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
PTP4A1P1-201ENST00000420539 C3orf80F5H4A9 247 aa8.83□□□□□ -1
PTP4A1P1-201ENST00000420539 MS4A1P11836 297 aa8.83□□□□□ -1
PTP4A1P1-201ENST00000420539 NUDT18Q6ZVK8 323 aa8.83□□□□□ -1
PTP4A1P1-201ENST00000420539 GPCPD1Q9NPB8 672 aa8.83□□□□□ -1
PTP4A1P1-201ENST00000420539 TRIM6-TRIM34B2RNG4 842 aa8.82□□□□□ -1
PTP4A1P1-201ENST00000420539 SMAPO00193 183 aa8.82□□□□□ -1
PTP4A1P1-201ENST00000420539 PNMA3Q9UL41 463 aa8.82□□□□□ -1
PTP4A1P1-201ENST00000420539 NBPF26B4DH59 902 aa8.81□□□□□ -1
PTP4A1P1-201ENST00000420539 RAD21O60216 631 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms