RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 MAP3K4Q9Y6R4 1608 aa20.63■□□□□ 0.89
SEMA4D-204ENST00000420101 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
SEMA4D-204ENST00000420101 RAPGEF3O95398 923 aa20.62■□□□□ 0.89
SEMA4D-204ENST00000420101 DIP2BQ9P265 1576 aa20.61■□□□□ 0.89
SEMA4D-204ENST00000420101 KIF3BO15066 747 aa20.61■□□□□ 0.89
SEMA4D-204ENST00000420101 UNC13BO14795 1591 aa20.61■□□□□ 0.89
SEMA4D-204ENST00000420101 RPRD2Q5VT52 1461 aaKnown RBP20.61■□□□□ 0.89
SEMA4D-204ENST00000420101 L3MBTL2Q969R5 705 aa20.6■□□□□ 0.89
SEMA4D-204ENST00000420101 DHX29Q7Z478 1369 aaKnown RBP20.59■□□□□ 0.89
SEMA4D-204ENST00000420101 KANK1Q14678 1352 aa20.57■□□□□ 0.88
SEMA4D-204ENST00000420101 NEFLP07196 543 aa20.57■□□□□ 0.88
SEMA4D-204ENST00000420101 KDM5CP41229 1560 aa20.55■□□□□ 0.88
SEMA4D-204ENST00000420101 KIDINS220Q9ULH0 1771 aa20.55■□□□□ 0.88
SEMA4D-204ENST00000420101 HECW2Q9P2P5 1572 aa20.54■□□□□ 0.88
SEMA4D-204ENST00000420101 MLH3Q9UHC1 1453 aa20.54■□□□□ 0.88
SEMA4D-204ENST00000420101 IQGAP3Q86VI3 1631 aa20.53■□□□□ 0.88
SEMA4D-204ENST00000420101 RBM19Q9Y4C8 960 aaKnown RBP20.53■□□□□ 0.88
SEMA4D-204ENST00000420101 A2MP01023 1474 aa20.53■□□□□ 0.88
SEMA4D-204ENST00000420101 TEX14Q8IWB6 1497 aa20.53■□□□□ 0.88
SEMA4D-204ENST00000420101 TSPOAP1O95153 1857 aa20.53■□□□□ 0.88
SEMA4D-204ENST00000420101 MAGI2Q86UL8 1455 aa20.53■□□□□ 0.88
SEMA4D-204ENST00000420101 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
SEMA4D-204ENST00000420101 CCDC144AA2RUR9 1427 aa20.49■□□□□ 0.87
SEMA4D-204ENST00000420101 FANCIQ9NVI1 1328 aa20.48■□□□□ 0.87
SEMA4D-204ENST00000420101 FKBP8Q14318 412 aa20.48■□□□□ 0.87
SEMA4D-204ENST00000420101 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
SEMA4D-204ENST00000420101 GGT6Q6P531 493 aa20.48■□□□□ 0.87
SEMA4D-204ENST00000420101 EIF2AK4Q9P2K8 1649 aaKnown RBP20.47■□□□□ 0.87
SEMA4D-204ENST00000420101 HIRIP3Q9BW71 556 aaPredicted RBP20.46■□□□□ 0.87
SEMA4D-204ENST00000420101 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
SEMA4D-204ENST00000420101 DEPDC5O75140 1603 aa20.44■□□□□ 0.86
SEMA4D-204ENST00000420101 ABCA6Q8N139 1617 aa20.44■□□□□ 0.86
SEMA4D-204ENST00000420101 KDM2AQ9Y2K7 1162 aa20.43■□□□□ 0.86
SEMA4D-204ENST00000420101 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
SEMA4D-204ENST00000420101 NBPF8Q3BBV2 869 aa20.41■□□□□ 0.86
SEMA4D-204ENST00000420101 PPRC1Q5VV67 1664 aaKnown RBP20.41■□□□□ 0.86
SEMA4D-204ENST00000420101 YEATS2Q9ULM3 1422 aa20.41■□□□□ 0.86
SEMA4D-204ENST00000420101 DCAF11Q8TEB1 546 aa20.41■□□□□ 0.86
SEMA4D-204ENST00000420101 PRDM15P57071 1507 aaPredicted RBP20.4■□□□□ 0.86
SEMA4D-204ENST00000420101 FRMPD1Q5SYB0 1578 aa20.39■□□□□ 0.86
SEMA4D-204ENST00000420101 PLA2R1Q13018 1463 aa20.39■□□□□ 0.86
SEMA4D-204ENST00000420101 KIF13AQ9H1H9 1805 aa20.39■□□□□ 0.86
SEMA4D-204ENST00000420101 DIP2CQ9Y2E4 1556 aa20.39■□□□□ 0.85
SEMA4D-204ENST00000420101 WASHC2CQ9Y4E1 1318 aa20.38■□□□□ 0.85
SEMA4D-204ENST00000420101 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.85
SEMA4D-204ENST00000420101 ERICH6BQ5W0A0 696 aa20.37■□□□□ 0.85
SEMA4D-204ENST00000420101 TET3O43151 1660 aa20.37■□□□□ 0.85
SEMA4D-204ENST00000420101 VWDEQ8N2E2 1590 aa20.37■□□□□ 0.85
SEMA4D-204ENST00000420101 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
SEMA4D-204ENST00000420101 E9PCH4 1651 aa20.36■□□□□ 0.85
SEMA4D-204ENST00000420101 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
SEMA4D-204ENST00000420101 ATP10AO60312 1499 aa20.35■□□□□ 0.85
SEMA4D-204ENST00000420101 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
SEMA4D-204ENST00000420101 RNF17Q9BXT8 1623 aaKnown RBP20.34■□□□□ 0.85
SEMA4D-204ENST00000420101 ZMYM4Q5VZL5 1548 aa20.34■□□□□ 0.85
SEMA4D-204ENST00000420101 BCANQ96GW7 911 aa20.3■□□□□ 0.84
SEMA4D-204ENST00000420101 TRPM2O94759 1503 aa20.29■□□□□ 0.84
SEMA4D-204ENST00000420101 EFCAB6Q5THR3 1501 aa20.29■□□□□ 0.84
SEMA4D-204ENST00000420101 PTPRTO14522 1441 aa20.29■□□□□ 0.84
SEMA4D-204ENST00000420101 CEP152O94986 1710 aa20.29■□□□□ 0.84
SEMA4D-204ENST00000420101 LMTK2Q8IWU2 1503 aa20.29■□□□□ 0.84
SEMA4D-204ENST00000420101 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
SEMA4D-204ENST00000420101 SPHKAPQ2M3C7 1700 aa20.28■□□□□ 0.84
SEMA4D-204ENST00000420101 BCORL1Q5H9F3 1711 aa20.27■□□□□ 0.84
SEMA4D-204ENST00000420101 COL17A1Q9UMD9 1497 aaPredicted RBP20.27■□□□□ 0.83
SEMA4D-204ENST00000420101 UHRF1BP1Q6BDS2 1440 aa20.27■□□□□ 0.83
SEMA4D-204ENST00000420101 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
SEMA4D-204ENST00000420101 CARD11Q9BXL7 1154 aa20.25■□□□□ 0.83
SEMA4D-204ENST00000420101 ABCC3O15438 1527 aa20.25■□□□□ 0.83
SEMA4D-204ENST00000420101 CHGAP10645 457 aaKnown RBP20.25■□□□□ 0.83
SEMA4D-204ENST00000420101 ANP32CO43423 234 aa20.24■□□□□ 0.83
SEMA4D-204ENST00000420101 MLECQ14165 292 aa20.23■□□□□ 0.83
SEMA4D-204ENST00000420101 NPATQ14207 1427 aa20.23■□□□□ 0.83
SEMA4D-204ENST00000420101 CLTCL1P53675 1640 aa20.23■□□□□ 0.83
SEMA4D-204ENST00000420101 DNAJC5Q9H3Z4 198 aa20.23■□□□□ 0.83
SEMA4D-204ENST00000420101 ROCK2O75116 1388 aaKnown RBP20.22■□□□□ 0.83
SEMA4D-204ENST00000420101 MSH5O43196 834 aa20.21■□□□□ 0.83
SEMA4D-204ENST00000420101 RALGAPBQ86X10 1494 aa20.21■□□□□ 0.83
SEMA4D-204ENST00000420101 SPATA31E1Q6ZUB1 1445 aa20.2■□□□□ 0.82
SEMA4D-204ENST00000420101 PRAG1Q86YV5 1406 aa20.2■□□□□ 0.82
SEMA4D-204ENST00000420101 USP47Q96K76 1375 aa20.19■□□□□ 0.82
SEMA4D-204ENST00000420101 UGGT1Q9NYU2 1555 aa20.19■□□□□ 0.82
SEMA4D-204ENST00000420101 ARID4BQ4LE39 1312 aaPredicted RBP20.19■□□□□ 0.82
SEMA4D-204ENST00000420101 CAMSAP1Q5T5Y3 1602 aa20.18■□□□□ 0.82
SEMA4D-204ENST00000420101 ESF1Q9H501 851 aaKnown RBP20.18■□□□□ 0.82
SEMA4D-204ENST00000420101 ARHGEF40Q8TER5 1519 aa20.17■□□□□ 0.82
SEMA4D-204ENST00000420101 CNTLNQ9NXG0 1405 aa20.17■□□□□ 0.82
SEMA4D-204ENST00000420101 REREQ9P2R6 1566 aa20.16■□□□□ 0.82
SEMA4D-204ENST00000420101 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
SEMA4D-204ENST00000420101 AGLP35573 1532 aa20.15■□□□□ 0.82
SEMA4D-204ENST00000420101 STAC3Q96MF2 364 aa20.15■□□□□ 0.82
SEMA4D-204ENST00000420101 PPP6R1Q9UPN7 881 aa20.14■□□□□ 0.81
SEMA4D-204ENST00000420101 NBPF1Q3BBV0 1214 aa20.13■□□□□ 0.81
SEMA4D-204ENST00000420101 CFAP65Q6ZU64 1925 aaKnown RBP20.13■□□□□ 0.81
SEMA4D-204ENST00000420101 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
SEMA4D-204ENST00000420101 ARHGAP31Q2M1Z3 1444 aa20.12■□□□□ 0.81
SEMA4D-204ENST00000420101 POLR3GLQ9BT43 218 aa20.12■□□□□ 0.81
SEMA4D-204ENST00000420101 KIF1BO60333 1816 aa20.11■□□□□ 0.81
SEMA4D-204ENST00000420101 NOS1P29475 1434 aa20.1■□□□□ 0.81
SEMA4D-204ENST00000420101 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms