RNA–Protein interactions for RNA: ENST00000418849.1

CMC1-203, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-203ENST00000418849 EPAS1Q99814 870 aa9.15□□□□□ -0.94
CMC1-203ENST00000418849 SPDYE16A6NNV3 312 aaPredicted RBP9.14□□□□□ -0.95
CMC1-203ENST00000418849 E2F4Q16254 413 aa9.14□□□□□ -0.95
CMC1-203ENST00000418849 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
CMC1-203ENST00000418849 ADAM33Q9BZ11 813 aa9.12□□□□□ -0.95
CMC1-203ENST00000418849 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
CMC1-203ENST00000418849 VPS9D1Q9Y2B5 631 aa9.12□□□□□ -0.95
CMC1-203ENST00000418849 PPP1R3GB7ZBB8 358 aa9.11□□□□□ -0.95
CMC1-203ENST00000418849 LAPTM4AQ15012 233 aa9.11□□□□□ -0.95
CMC1-203ENST00000418849 PDIA6Q15084 440 aa9.11□□□□□ -0.95
CMC1-203ENST00000418849 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
CMC1-203ENST00000418849 LCE2BO14633 110 aa9.09□□□□□ -0.95
CMC1-203ENST00000418849 ARIH1Q9Y4X5 557 aaPredicted RBP9.09□□□□□ -0.95
CMC1-203ENST00000418849 GOLGA8CPA6NN73 597 aa9.08□□□□□ -0.96
CMC1-203ENST00000418849 ZBED2Q9BTP6 218 aa9.08□□□□□ -0.96
CMC1-203ENST00000418849 TRAF7Q6Q0C0 670 aa9.07□□□□□ -0.96
CMC1-203ENST00000418849 MRPL50Q8N5N7 158 aaKnown RBP9.07□□□□□ -0.96
CMC1-203ENST00000418849 NBR1Q14596 966 aa9.04□□□□□ -0.96
CMC1-203ENST00000418849 DDX12PQ92771 950 aa9.04□□□□□ -0.96
CMC1-203ENST00000418849 ITGBL1O95965 494 aaPredicted RBP9.03□□□□□ -0.96
CMC1-203ENST00000418849 RABGEF1Q9UJ41 708 aa9.03□□□□□ -0.96
CMC1-203ENST00000418849 MAP3K7O43318 606 aa9.02□□□□□ -0.97
CMC1-203ENST00000418849 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
CMC1-203ENST00000418849 C6orf132Q5T0Z8 1188 aa9.02□□□□□ -0.97
CMC1-203ENST00000418849 BHMG1C9JSJ3 638 aaPredicted RBP9.01□□□□□ -0.97
CMC1-203ENST00000418849 EN1Q05925 392 aaPredicted RBP9.01□□□□□ -0.97
CMC1-203ENST00000418849 LAPTM4BQ86VI4 370 aa9□□□□□ -0.97
CMC1-203ENST00000418849 P3H3Q8IVL6 736 aa9□□□□□ -0.97
CMC1-203ENST00000418849 CERKQ8TCT0 537 aa9□□□□□ -0.97
CMC1-203ENST00000418849 WNT2BQ93097 391 aa9□□□□□ -0.97
CMC1-203ENST00000418849 RBM33Q96EV2 1170 aaKnown RBP9□□□□□ -0.97
CMC1-203ENST00000418849 COL9A1P20849 921 aa8.98□□□□□ -0.97
CMC1-203ENST00000418849 ANKK1Q8NFD2 765 aa8.98□□□□□ -0.97
CMC1-203ENST00000418849 TSHZ2Q9NRE2 1034 aa8.98□□□□□ -0.97
CMC1-203ENST00000418849 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
CMC1-203ENST00000418849 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
CMC1-203ENST00000418849 TRIM6-TRIM34B2RNG4 842 aa8.96□□□□□ -0.98
CMC1-203ENST00000418849 GFRA3O60609 400 aa8.96□□□□□ -0.98
CMC1-203ENST00000418849 PROX2Q3B8N5 592 aa8.96□□□□□ -0.98
CMC1-203ENST00000418849 PACS2Q86VP3 889 aa8.95□□□□□ -0.98
CMC1-203ENST00000418849 PLCB2Q00722 1185 aa8.94□□□□□ -0.98
CMC1-203ENST00000418849 KIAA1468Q9P260 1216 aa8.94□□□□□ -0.98
CMC1-203ENST00000418849 FAM98CQ17RN3 349 aaKnown RBP8.92□□□□□ -0.98
CMC1-203ENST00000418849 TSR1Q2NL82 804 aaKnown RBP8.91□□□□□ -0.98
CMC1-203ENST00000418849 ZNF787Q6DD87 383 aa8.91□□□□□ -0.98
CMC1-203ENST00000418849 NYAP1Q6ZVC0 841 aa8.91□□□□□ -0.98
CMC1-203ENST00000418849 ZNF775Q96BV0 537 aaPredicted RBP8.9□□□□□ -0.98
CMC1-203ENST00000418849 RBM27Q9P2N5 1060 aaKnown RBP8.9□□□□□ -0.98
CMC1-203ENST00000418849 NBPF26B4DH59 902 aa8.89□□□□□ -0.99
CMC1-203ENST00000418849 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
CMC1-203ENST00000418849 ZFRQ96KR1 1074 aaKnown RBP8.89□□□□□ -0.99
CMC1-203ENST00000418849 OSBPP22059 807 aa8.88□□□□□ -0.99
CMC1-203ENST00000418849 PRSS12P56730 875 aa8.88□□□□□ -0.99
CMC1-203ENST00000418849 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
CMC1-203ENST00000418849 SOWAHBA6NEL2 793 aa8.87□□□□□ -0.99
CMC1-203ENST00000418849 NRG2O14511 850 aaPredicted RBP8.87□□□□□ -0.99
CMC1-203ENST00000418849 LRCH3Q96II8 777 aa8.87□□□□□ -0.99
CMC1-203ENST00000418849 SEPT9Q9UHD8 586 aaPredicted RBP8.87□□□□□ -0.99
CMC1-203ENST00000418849 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
CMC1-203ENST00000418849 KCNC4Q03721 635 aa8.85□□□□□ -0.99
CMC1-203ENST00000418849 HDGFP51858 240 aaKnown RBP8.84□□□□□ -0.99
CMC1-203ENST00000418849 TSKSQ9UJT2 592 aa8.84□□□□□ -0.99
CMC1-203ENST00000418849 BCAMP50895 628 aa8.83□□□□□ -1
CMC1-203ENST00000418849 NECTIN2Q92692 538 aa8.83□□□□□ -1
CMC1-203ENST00000418849 SLC4A3P48751 1232 aa8.82□□□□□ -1
CMC1-203ENST00000418849 TSR3Q9UJK0 312 aaKnown RBP8.82□□□□□ -1
CMC1-203ENST00000418849 CDHR5Q9HBB8 845 aa8.81□□□□□ -1
CMC1-203ENST00000418849 PNMA3Q9UL41 463 aa8.81□□□□□ -1
CMC1-203ENST00000418849 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
CMC1-203ENST00000418849 HAP1P54257 671 aaPredicted RBP8.8□□□□□ -1
CMC1-203ENST00000418849 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
CMC1-203ENST00000418849 TATDN2Q93075 761 aa8.8□□□□□ -1
CMC1-203ENST00000418849 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
CMC1-203ENST00000418849 MLLT3P42568 568 aaPredicted RBP8.78□□□□□ -1
CMC1-203ENST00000418849 PPP4CP60510 307 aa8.77□□□□□ -1.01
CMC1-203ENST00000418849 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
CMC1-203ENST00000418849 PADI6Q6TGC4 694 aa8.76□□□□□ -1.01
CMC1-203ENST00000418849 NUDT18Q6ZVK8 323 aa8.76□□□□□ -1.01
CMC1-203ENST00000418849 SMAPO00193 183 aa8.75□□□□□ -1.01
CMC1-203ENST00000418849 SAMD7Q7Z3H4 446 aa8.75□□□□□ -1.01
CMC1-203ENST00000418849 TTC13Q8NBP0 860 aa8.75□□□□□ -1.01
CMC1-203ENST00000418849 NUTM2FA1L443 756 aa8.74□□□□□ -1.01
CMC1-203ENST00000418849 SLF2Q8IX21 1173 aa8.74□□□□□ -1.01
CMC1-203ENST00000418849 NPDC1Q9NQX5 325 aaPredicted RBP8.74□□□□□ -1.01
CMC1-203ENST00000418849 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
CMC1-203ENST00000418849 RNF40O75150 1001 aa8.73□□□□□ -1.01
CMC1-203ENST00000418849 FCHSD2O94868 740 aa8.73□□□□□ -1.01
CMC1-203ENST00000418849 PTGDRQ13258 359 aa8.73□□□□□ -1.01
CMC1-203ENST00000418849 SEMA3EO15041 775 aa8.72□□□□□ -1.01
CMC1-203ENST00000418849 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
CMC1-203ENST00000418849 PRKD2Q9BZL6 878 aa8.72□□□□□ -1.01
CMC1-203ENST00000418849 PRR14Q9BWN1 585 aa8.71□□□□□ -1.02
CMC1-203ENST00000418849 V9GY48 417 aaPredicted RBP8.7□□□□□ -1.02
CMC1-203ENST00000418849 TESPA1A2RU30 521 aaPredicted RBP8.69□□□□□ -1.02
CMC1-203ENST00000418849 TULP1O00294 542 aaPredicted RBP8.69□□□□□ -1.02
CMC1-203ENST00000418849 DNAJB2P25686 324 aa8.68□□□□□ -1.02
CMC1-203ENST00000418849 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
CMC1-203ENST00000418849 HIC1Q14526 733 aa8.67□□□□□ -1.02
CMC1-203ENST00000418849 SWT1Q5T5J6 900 aaKnown RBP8.66□□□□□ -1.02
CMC1-203ENST00000418849 EYA1Q99502 592 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms