RNA–Protein interactions for RNA: ENST00000418110.5

PTPN12-204, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-204ENST00000418110 IFFO2Q5TF58 517 aa9.28□□□□□ -0.92
PTPN12-204ENST00000418110 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
PTPN12-204ENST00000418110 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
PTPN12-204ENST00000418110 RGS20O76081 388 aa9.27□□□□□ -0.93
PTPN12-204ENST00000418110 ANO8Q9HCE9 1232 aaPredicted RBP9.26□□□□□ -0.93
PTPN12-204ENST00000418110 CADPS2Q86UW7 1296 aa9.25□□□□□ -0.93
PTPN12-204ENST00000418110 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
PTPN12-204ENST00000418110 ANKK1Q8NFD2 765 aa9.24□□□□□ -0.93
PTPN12-204ENST00000418110 PROX2Q3B8N5 592 aa9.23□□□□□ -0.93
PTPN12-204ENST00000418110 RABGEF1Q9UJ41 708 aa9.21□□□□□ -0.94
PTPN12-204ENST00000418110 BCAMP50895 628 aa9.2□□□□□ -0.94
PTPN12-204ENST00000418110 PCDHGA10Q9Y5H3 936 aa9.2□□□□□ -0.94
PTPN12-204ENST00000418110 COL9A1P20849 921 aa9.19□□□□□ -0.94
PTPN12-204ENST00000418110 EMILIN3Q9NT22 766 aa9.19□□□□□ -0.94
PTPN12-204ENST00000418110 MFSD10Q14728 455 aa9.17□□□□□ -0.94
PTPN12-204ENST00000418110 TYW1BQ6NUM6 668 aa9.17□□□□□ -0.94
PTPN12-204ENST00000418110 PHF14O94880 888 aa9.15□□□□□ -0.94
PTPN12-204ENST00000418110 FBXW7Q969H0 707 aa9.15□□□□□ -0.94
PTPN12-204ENST00000418110 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
PTPN12-204ENST00000418110 ITGBL1O95965 494 aaPredicted RBP9.14□□□□□ -0.95
PTPN12-204ENST00000418110 ZFRQ96KR1 1074 aaKnown RBP9.14□□□□□ -0.95
PTPN12-204ENST00000418110 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
PTPN12-204ENST00000418110 SEPT9Q9UHD8 586 aaPredicted RBP9.14□□□□□ -0.95
PTPN12-204ENST00000418110 Q6ZNB5 142 aa9.13□□□□□ -0.95
PTPN12-204ENST00000418110 LAPTM4BQ86VI4 370 aa9.13□□□□□ -0.95
PTPN12-204ENST00000418110 WBP1LQ9NX94 342 aa9.12□□□□□ -0.95
PTPN12-204ENST00000418110 NYAP1Q6ZVC0 841 aa9.11□□□□□ -0.95
PTPN12-204ENST00000418110 KCNC4Q03721 635 aa9.1□□□□□ -0.95
PTPN12-204ENST00000418110 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
PTPN12-204ENST00000418110 RBM33Q96EV2 1170 aaKnown RBP9.09□□□□□ -0.95
PTPN12-204ENST00000418110 WDR70Q9NW82 654 aa9.09□□□□□ -0.95
PTPN12-204ENST00000418110 DPYSL4O14531 572 aa9.08□□□□□ -0.96
PTPN12-204ENST00000418110 EPAS1Q99814 870 aa9.08□□□□□ -0.96
PTPN12-204ENST00000418110 TRIM6-TRIM34B2RNG4 842 aa9.07□□□□□ -0.96
PTPN12-204ENST00000418110 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.07□□□□□ -0.96
PTPN12-204ENST00000418110 HPS5Q9UPZ3 1129 aa9.07□□□□□ -0.96
PTPN12-204ENST00000418110 FAM98CQ17RN3 349 aaKnown RBP9.06□□□□□ -0.96
PTPN12-204ENST00000418110 LRCH3Q96II8 777 aa9.06□□□□□ -0.96
PTPN12-204ENST00000418110 ONECUT3O60422 494 aaPredicted RBP9.05□□□□□ -0.96
PTPN12-204ENST00000418110 DDX12PQ92771 950 aa9.05□□□□□ -0.96
PTPN12-204ENST00000418110 TSR3Q9UJK0 312 aaKnown RBP9.05□□□□□ -0.96
PTPN12-204ENST00000418110 CAMK2BQ13554 666 aa9.04□□□□□ -0.96
PTPN12-204ENST00000418110 NBR1Q14596 966 aa9.01□□□□□ -0.97
PTPN12-204ENST00000418110 MAP3K7O43318 606 aa9□□□□□ -0.97
PTPN12-204ENST00000418110 PACS2Q86VP3 889 aa8.99□□□□□ -0.97
PTPN12-204ENST00000418110 KCNV2Q8TDN2 545 aa8.99□□□□□ -0.97
PTPN12-204ENST00000418110 BCANQ96GW7 911 aa8.99□□□□□ -0.97
PTPN12-204ENST00000418110 PPP4CP60510 307 aa8.98□□□□□ -0.97
PTPN12-204ENST00000418110 E2F4Q16254 413 aa8.98□□□□□ -0.97
PTPN12-204ENST00000418110 TSR1Q2NL82 804 aaKnown RBP8.98□□□□□ -0.97
PTPN12-204ENST00000418110 TSKSQ9UJT2 592 aa8.98□□□□□ -0.97
PTPN12-204ENST00000418110 EN1Q05925 392 aaPredicted RBP8.97□□□□□ -0.97
PTPN12-204ENST00000418110 GFRA3O60609 400 aa8.96□□□□□ -0.98
PTPN12-204ENST00000418110 LAPTM4AQ15012 233 aa8.96□□□□□ -0.98
PTPN12-204ENST00000418110 P3H3Q8IVL6 736 aa8.96□□□□□ -0.98
PTPN12-204ENST00000418110 SMAPO00193 183 aa8.95□□□□□ -0.98
PTPN12-204ENST00000418110 RNF40O75150 1001 aa8.94□□□□□ -0.98
PTPN12-204ENST00000418110 SAMD7Q7Z3H4 446 aa8.94□□□□□ -0.98
PTPN12-204ENST00000418110 PRKD2Q9BZL6 878 aa8.92□□□□□ -0.98
PTPN12-204ENST00000418110 ARIH1Q9Y4X5 557 aaPredicted RBP8.92□□□□□ -0.98
PTPN12-204ENST00000418110 PDIA6Q15084 440 aa8.91□□□□□ -0.98
PTPN12-204ENST00000418110 TRAF7Q6Q0C0 670 aa8.91□□□□□ -0.98
PTPN12-204ENST00000418110 CDCA7LQ96GN5 454 aa8.91□□□□□ -0.98
PTPN12-204ENST00000418110 ARHGEF1Q92888 912 aaKnown RBP8.9□□□□□ -0.98
PTPN12-204ENST00000418110 MTRQ99707 1265 aa8.9□□□□□ -0.98
PTPN12-204ENST00000418110 PNMA3Q9UL41 463 aa8.9□□□□□ -0.98
PTPN12-204ENST00000418110 NBPF26B4DH59 902 aa8.89□□□□□ -0.99
PTPN12-204ENST00000418110 TJAP1Q5JTD0 557 aa8.89□□□□□ -0.99
PTPN12-204ENST00000418110 PRSS12P56730 875 aa8.88□□□□□ -0.99
PTPN12-204ENST00000418110 PPP1R18Q6NYC8 613 aa8.88□□□□□ -0.99
PTPN12-204ENST00000418110 IL21Q9HBE4 155 aa8.88□□□□□ -0.99
PTPN12-204ENST00000418110 GRXCR2A6NFK2 248 aa8.87□□□□□ -0.99
PTPN12-204ENST00000418110 LCE2BO14633 110 aa8.87□□□□□ -0.99
PTPN12-204ENST00000418110 TATDN2Q93075 761 aa8.87□□□□□ -0.99
PTPN12-204ENST00000418110 SPDYE16A6NNV3 312 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-204ENST00000418110 HDGFP51858 240 aaKnown RBP8.86□□□□□ -0.99
PTPN12-204ENST00000418110 CERKQ8TCT0 537 aa8.86□□□□□ -0.99
PTPN12-204ENST00000418110 FAM198AQ9UFP1 575 aa8.86□□□□□ -0.99
PTPN12-204ENST00000418110 NRG2O14511 850 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-204ENST00000418110 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
PTPN12-204ENST00000418110 C3orf80F5H4A9 247 aa8.83□□□□□ -1
PTPN12-204ENST00000418110 NUDT18Q6ZVK8 323 aa8.83□□□□□ -1
PTPN12-204ENST00000418110 CDHR5Q9HBB8 845 aa8.83□□□□□ -1
PTPN12-204ENST00000418110 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.83□□□□□ -1
PTPN12-204ENST00000418110 V9GY48 417 aaPredicted RBP8.83□□□□□ -1
PTPN12-204ENST00000418110 SEMA3EO15041 775 aa8.82□□□□□ -1
PTPN12-204ENST00000418110 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
PTPN12-204ENST00000418110 APLP1P51693 650 aa8.81□□□□□ -1
PTPN12-204ENST00000418110 COPS2P61201 443 aa8.8□□□□□ -1
PTPN12-204ENST00000418110 NKX2-3Q8TAU0 364 aa8.79□□□□□ -1
PTPN12-204ENST00000418110 PDZRN3Q9UPQ7 1066 aa8.79□□□□□ -1
PTPN12-204ENST00000418110 GGCXP38435 758 aa8.78□□□□□ -1
PTPN12-204ENST00000418110 SWT1Q5T5J6 900 aaKnown RBP8.77□□□□□ -1.01
PTPN12-204ENST00000418110 ZNF787Q6DD87 383 aa8.77□□□□□ -1.01
PTPN12-204ENST00000418110 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
PTPN12-204ENST00000418110 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
PTPN12-204ENST00000418110 MLLT3P42568 568 aaPredicted RBP8.75□□□□□ -1.01
PTPN12-204ENST00000418110 SLC4A3P48751 1232 aa8.75□□□□□ -1.01
PTPN12-204ENST00000418110 PADI6Q6TGC4 694 aa8.75□□□□□ -1.01
PTPN12-204ENST00000418110 SLF2Q8IX21 1173 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms