RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 HSPA1LP34931 641 aa14.89□□□□□ -0.03
NIF3L1-206ENST00000416651 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
NIF3L1-206ENST00000416651 SPDYE4A6NLX3 237 aa14.88□□□□□ -0.03
NIF3L1-206ENST00000416651 DIP2CQ9Y2E4 1556 aa14.87□□□□□ -0.03
NIF3L1-206ENST00000416651 CAMSAP1Q5T5Y3 1602 aa14.86□□□□□ -0.03
NIF3L1-206ENST00000416651 ABCA6Q8N139 1617 aa14.84□□□□□ -0.03
NIF3L1-206ENST00000416651 TRAPPC8Q9Y2L5 1435 aa14.84□□□□□ -0.03
NIF3L1-206ENST00000416651 MYT1LQ9UL68 1186 aa14.83□□□□□ -0.04
NIF3L1-206ENST00000416651 KIF14Q15058 1648 aa14.82□□□□□ -0.04
NIF3L1-206ENST00000416651 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
NIF3L1-206ENST00000416651 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
NIF3L1-206ENST00000416651 EFCAB2Q5VUJ9 269 aa14.82□□□□□ -0.04
NIF3L1-206ENST00000416651 KDM5CP41229 1560 aa14.81□□□□□ -0.04
NIF3L1-206ENST00000416651 PHF12Q96QT6 1004 aa14.79□□□□□ -0.04
NIF3L1-206ENST00000416651 MYO5CQ9NQX4 1742 aa14.79□□□□□ -0.04
NIF3L1-206ENST00000416651 ZNF518AQ6AHZ1 1483 aa14.77□□□□□ -0.04
NIF3L1-206ENST00000416651 ATP1B4Q9UN42 357 aaPredicted RBP14.76□□□□□ -0.05
NIF3L1-206ENST00000416651 REREQ9P2R6 1566 aa14.75□□□□□ -0.05
NIF3L1-206ENST00000416651 ARHGAP5Q13017 1502 aa14.75□□□□□ -0.05
NIF3L1-206ENST00000416651 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
NIF3L1-206ENST00000416651 PLSCR2Q9NRY7 297 aa14.74□□□□□ -0.05
NIF3L1-206ENST00000416651 AGLP35573 1532 aa14.73□□□□□ -0.05
NIF3L1-206ENST00000416651 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
NIF3L1-206ENST00000416651 ALKQ9UM73 1620 aa14.73□□□□□ -0.05
NIF3L1-206ENST00000416651 ZMYM3Q14202 1370 aa14.73□□□□□ -0.05
NIF3L1-206ENST00000416651 MLH3Q9UHC1 1453 aa14.72□□□□□ -0.05
NIF3L1-206ENST00000416651 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
NIF3L1-206ENST00000416651 KIDINS220Q9ULH0 1771 aa14.72□□□□□ -0.05
NIF3L1-206ENST00000416651 CDC42BPBQ9Y5S2 1711 aa14.72□□□□□ -0.05
NIF3L1-206ENST00000416651 TCOF1Q13428 1488 aaKnown RBP14.71□□□□□ -0.05
NIF3L1-206ENST00000416651 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
NIF3L1-206ENST00000416651 RGS17Q9UGC6 210 aaPredicted RBP14.71□□□□□ -0.05
NIF3L1-206ENST00000416651 MYO3AQ8NEV4 1616 aa14.7□□□□□ -0.06
NIF3L1-206ENST00000416651 NPATQ14207 1427 aa14.68□□□□□ -0.06
NIF3L1-206ENST00000416651 LRRIQ1Q96JM4 1722 aa14.68□□□□□ -0.06
NIF3L1-206ENST00000416651 SUPT6HQ7KZ85 1726 aaKnown RBP14.67□□□□□ -0.06
NIF3L1-206ENST00000416651 PKD2Q13563 968 aa14.67□□□□□ -0.06
NIF3L1-206ENST00000416651 CEP170BQ9Y4F5 1589 aaPredicted RBP14.67□□□□□ -0.06
NIF3L1-206ENST00000416651 CLTCQ00610 1675 aaKnown RBP14.67□□□□□ -0.06
NIF3L1-206ENST00000416651 PTPRKQ15262 1439 aa14.66□□□□□ -0.06
NIF3L1-206ENST00000416651 CNTLNQ9NXG0 1405 aa14.66□□□□□ -0.06
NIF3L1-206ENST00000416651 ZNF142P52746 1687 aaPredicted RBP14.66□□□□□ -0.06
NIF3L1-206ENST00000416651 ITSN2Q9NZM3 1697 aa14.66□□□□□ -0.06
NIF3L1-206ENST00000416651 PLA2R1Q13018 1463 aa14.66□□□□□ -0.06
NIF3L1-206ENST00000416651 ABCC1P33527 1531 aa14.66□□□□□ -0.06
NIF3L1-206ENST00000416651 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
NIF3L1-206ENST00000416651 TROQ12816 1431 aaPredicted RBP14.65□□□□□ -0.06
NIF3L1-206ENST00000416651 MROH2AA6NES4 1674 aa14.65□□□□□ -0.06
NIF3L1-206ENST00000416651 TOM1O60784 492 aa14.63□□□□□ -0.07
NIF3L1-206ENST00000416651 NEURL4Q96JN8 1562 aa14.63□□□□□ -0.07
NIF3L1-206ENST00000416651 SHANK2Q9UPX8 1470 aa14.61□□□□□ -0.07
NIF3L1-206ENST00000416651 SAMD9LQ8IVG5 1584 aa14.6□□□□□ -0.07
NIF3L1-206ENST00000416651 DNMT1P26358 1616 aaKnown RBP14.6□□□□□ -0.07
NIF3L1-206ENST00000416651 PREX2Q70Z35 1606 aa14.59□□□□□ -0.07
NIF3L1-206ENST00000416651 HNRNPMP52272 730 aaKnown RBP eCLIP14.59□□□□□ -0.07
NIF3L1-206ENST00000416651 GGT6Q6P531 493 aa14.59□□□□□ -0.07
NIF3L1-206ENST00000416651 VWDEQ8N2E2 1590 aa14.59□□□□□ -0.07
NIF3L1-206ENST00000416651 ARHGAP35Q9NRY4 1499 aa14.58□□□□□ -0.08
NIF3L1-206ENST00000416651 FBXO31Q5XUX0 539 aaPredicted RBP14.58□□□□□ -0.08
NIF3L1-206ENST00000416651 POTEAQ6S8J7 498 aa14.58□□□□□ -0.08
NIF3L1-206ENST00000416651 MS4A3Q96HJ5 214 aa14.58□□□□□ -0.08
NIF3L1-206ENST00000416651 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.08
NIF3L1-206ENST00000416651 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
NIF3L1-206ENST00000416651 CPS1P31327 1500 aa14.56□□□□□ -0.08
NIF3L1-206ENST00000416651 CDK11AQ9UQ88 783 aaPredicted RBP14.56□□□□□ -0.08
NIF3L1-206ENST00000416651 A2ML1A8K2U0 1454 aa14.56□□□□□ -0.08
NIF3L1-206ENST00000416651 CDC42BPAQ5VT25 1732 aa14.55□□□□□ -0.08
NIF3L1-206ENST00000416651 ASTLQ6HA08 431 aaPredicted RBP14.55□□□□□ -0.08
NIF3L1-206ENST00000416651 SYCP2Q9BX26 1530 aa14.54□□□□□ -0.08
NIF3L1-206ENST00000416651 POLR1AO95602 1720 aaPredicted RBP14.54□□□□□ -0.08
NIF3L1-206ENST00000416651 PLXNC1O60486 1568 aa14.53□□□□□ -0.08
NIF3L1-206ENST00000416651 CLIP1P30622 1438 aa14.53□□□□□ -0.08
NIF3L1-206ENST00000416651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
NIF3L1-206ENST00000416651 SPAG9O60271 1321 aaKnown RBP14.53□□□□□ -0.08
NIF3L1-206ENST00000416651 METRNQ9UJH8 293 aa14.53□□□□□ -0.08
NIF3L1-206ENST00000416651 SETD1AO15047 1707 aaKnown RBP14.52□□□□□ -0.09
NIF3L1-206ENST00000416651 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
NIF3L1-206ENST00000416651 POTEMA6NI47 508 aa14.51□□□□□ -0.09
NIF3L1-206ENST00000416651 ATMINO43313 823 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-206ENST00000416651 PROM2Q8N271 834 aa14.51□□□□□ -0.09
NIF3L1-206ENST00000416651 A2MP01023 1474 aa14.5□□□□□ -0.09
NIF3L1-206ENST00000416651 ATP7AQ04656 1500 aa14.5□□□□□ -0.09
NIF3L1-206ENST00000416651 LRRC7Q96NW7 1537 aa14.5□□□□□ -0.09
NIF3L1-206ENST00000416651 SLC39A7Q92504 469 aa14.49□□□□□ -0.09
NIF3L1-206ENST00000416651 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
NIF3L1-206ENST00000416651 INO80Q9ULG1 1556 aaPredicted RBP14.48□□□□□ -0.09
NIF3L1-206ENST00000416651 C7P10643 843 aa14.48□□□□□ -0.09
NIF3L1-206ENST00000416651 TNRQ92752 1358 aa14.47□□□□□ -0.09
NIF3L1-206ENST00000416651 UBTFP17480 764 aaKnown RBP14.46□□□□□ -0.09
NIF3L1-206ENST00000416651 POTEGQ6S5H5 508 aa14.46□□□□□ -0.09
NIF3L1-206ENST00000416651 NPHP4O75161 1426 aaPredicted RBP14.46□□□□□ -0.09
NIF3L1-206ENST00000416651 GPATCH8Q9UKJ3 1502 aaKnown RBP14.46□□□□□ -0.1
NIF3L1-206ENST00000416651 ANKLE2Q86XL3 938 aa14.45□□□□□ -0.1
NIF3L1-206ENST00000416651 ZNF644Q9H582 1327 aaPredicted RBP14.44□□□□□ -0.1
NIF3L1-206ENST00000416651 EEA1Q15075 1411 aa14.43□□□□□ -0.1
NIF3L1-206ENST00000416651 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
NIF3L1-206ENST00000416651 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
NIF3L1-206ENST00000416651 MED14O60244 1454 aa14.42□□□□□ -0.1
NIF3L1-206ENST00000416651 RNF17Q9BXT8 1623 aaKnown RBP14.41□□□□□ -0.1
NIF3L1-206ENST00000416651 XIRP1Q702N8 1843 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 323.1 ms