RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 DHX29Q7Z478 1369 aaKnown RBP25.96■■□□□ 1.75
RTN4R-202ENST00000416372 TSPOAP1O95153 1857 aa25.95■■□□□ 1.74
RTN4R-202ENST00000416372 RAPGEF3O95398 923 aa25.93■■□□□ 1.74
RTN4R-202ENST00000416372 EIF2AK4Q9P2K8 1649 aaKnown RBP25.93■■□□□ 1.74
RTN4R-202ENST00000416372 TEX14Q8IWB6 1497 aa25.91■■□□□ 1.74
RTN4R-202ENST00000416372 RICTORQ6R327 1708 aa25.91■■□□□ 1.74
RTN4R-202ENST00000416372 PPRC1Q5VV67 1664 aaKnown RBP25.91■■□□□ 1.74
RTN4R-202ENST00000416372 DEPDC5O75140 1603 aa25.9■■□□□ 1.74
RTN4R-202ENST00000416372 KIF13AQ9H1H9 1805 aa25.9■■□□□ 1.74
RTN4R-202ENST00000416372 A2MP01023 1474 aa25.89■■□□□ 1.74
RTN4R-202ENST00000416372 KIF3BO15066 747 aa25.89■■□□□ 1.73
RTN4R-202ENST00000416372 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
RTN4R-202ENST00000416372 ABCA6Q8N139 1617 aa25.85■■□□□ 1.73
RTN4R-202ENST00000416372 TRHP20396 242 aaPredicted RBP25.85■■□□□ 1.73
RTN4R-202ENST00000416372 KANK1Q14678 1352 aa25.85■■□□□ 1.73
RTN4R-202ENST00000416372 FRMPD1Q5SYB0 1578 aa25.82■■□□□ 1.72
RTN4R-202ENST00000416372 DIEXFQ68CQ4 756 aaKnown RBP25.81■■□□□ 1.72
RTN4R-202ENST00000416372 PRDM15P57071 1507 aaPredicted RBP25.81■■□□□ 1.72
RTN4R-202ENST00000416372 VWDEQ8N2E2 1590 aa25.79■■□□□ 1.72
RTN4R-202ENST00000416372 DIP2CQ9Y2E4 1556 aa25.79■■□□□ 1.72
RTN4R-202ENST00000416372 MROH1Q8NDA8 1641 aa25.79■■□□□ 1.72
RTN4R-202ENST00000416372 TET3O43151 1660 aa25.77■■□□□ 1.72
RTN4R-202ENST00000416372 RNF17Q9BXT8 1623 aaKnown RBP25.77■■□□□ 1.72
RTN4R-202ENST00000416372 ZMYM4Q5VZL5 1548 aa25.76■■□□□ 1.71
RTN4R-202ENST00000416372 CCDC144AA2RUR9 1427 aa25.76■■□□□ 1.71
RTN4R-202ENST00000416372 E9PCH4 1651 aa25.76■■□□□ 1.71
RTN4R-202ENST00000416372 PLA2R1Q13018 1463 aa25.76■■□□□ 1.71
RTN4R-202ENST00000416372 BCORL1Q5H9F3 1711 aa25.74■■□□□ 1.71
RTN4R-202ENST00000416372 ATP10AO60312 1499 aa25.74■■□□□ 1.71
RTN4R-202ENST00000416372 YEATS2Q9ULM3 1422 aa25.73■■□□□ 1.71
RTN4R-202ENST00000416372 GGT6Q6P531 493 aa25.68■■□□□ 1.7
RTN4R-202ENST00000416372 NBPF8Q3BBV2 869 aa25.67■■□□□ 1.7
RTN4R-202ENST00000416372 LMTK2Q8IWU2 1503 aa25.67■■□□□ 1.7
RTN4R-202ENST00000416372 CEP152O94986 1710 aa25.66■■□□□ 1.7
RTN4R-202ENST00000416372 SPHKAPQ2M3C7 1700 aa25.66■■□□□ 1.7
RTN4R-202ENST00000416372 EFCAB6Q5THR3 1501 aa25.64■■□□□ 1.7
RTN4R-202ENST00000416372 TRPM2O94759 1503 aa25.64■■□□□ 1.69
RTN4R-202ENST00000416372 PTPRTO14522 1441 aa25.64■■□□□ 1.69
RTN4R-202ENST00000416372 COL17A1Q9UMD9 1497 aaPredicted RBP25.62■■□□□ 1.69
RTN4R-202ENST00000416372 ZNF326Q5BKZ1 582 aaKnown RBP25.6■■□□□ 1.69
RTN4R-202ENST00000416372 DCAF11Q8TEB1 546 aa25.6■■□□□ 1.69
RTN4R-202ENST00000416372 WASHC2CQ9Y4E1 1318 aa25.6■■□□□ 1.69
RTN4R-202ENST00000416372 HIRIP3Q9BW71 556 aaPredicted RBP25.59■■□□□ 1.69
RTN4R-202ENST00000416372 RGL3Q3MIN7 710 aa25.59■■□□□ 1.69
RTN4R-202ENST00000416372 UHRF1BP1Q6BDS2 1440 aa25.59■■□□□ 1.69
RTN4R-202ENST00000416372 ABCC3O15438 1527 aa25.58■■□□□ 1.69
RTN4R-202ENST00000416372 KDM2AQ9Y2K7 1162 aa25.58■■□□□ 1.69
RTN4R-202ENST00000416372 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
RTN4R-202ENST00000416372 CLTCL1P53675 1640 aa25.56■■□□□ 1.68
RTN4R-202ENST00000416372 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.68
RTN4R-202ENST00000416372 CAMSAP1Q5T5Y3 1602 aa25.53■■□□□ 1.68
RTN4R-202ENST00000416372 HSPA5P11021 654 aaKnown RBP25.53■■□□□ 1.68
RTN4R-202ENST00000416372 ZC3H13Q5T200 1668 aaKnown RBP25.52■■□□□ 1.68
RTN4R-202ENST00000416372 ARHGEF40Q8TER5 1519 aa25.52■■□□□ 1.68
RTN4R-202ENST00000416372 SPATA31E1Q6ZUB1 1445 aa25.52■■□□□ 1.68
RTN4R-202ENST00000416372 NPATQ14207 1427 aa25.51■■□□□ 1.67
RTN4R-202ENST00000416372 AGLP35573 1532 aa25.51■■□□□ 1.67
RTN4R-202ENST00000416372 RALGAPBQ86X10 1494 aa25.49■■□□□ 1.67
RTN4R-202ENST00000416372 CFAP65Q6ZU64 1925 aaKnown RBP25.46■■□□□ 1.67
RTN4R-202ENST00000416372 PRAG1Q86YV5 1406 aa25.46■■□□□ 1.67
RTN4R-202ENST00000416372 UGGT1Q9NYU2 1555 aa25.45■■□□□ 1.66
RTN4R-202ENST00000416372 CNTLNQ9NXG0 1405 aa25.44■■□□□ 1.66
RTN4R-202ENST00000416372 KIF1BO60333 1816 aa25.44■■□□□ 1.66
RTN4R-202ENST00000416372 ARHGAP31Q2M1Z3 1444 aa25.43■■□□□ 1.66
RTN4R-202ENST00000416372 NEURL4Q96JN8 1562 aa25.43■■□□□ 1.66
RTN4R-202ENST00000416372 SIGLEC1Q9BZZ2 1709 aa25.42■■□□□ 1.66
RTN4R-202ENST00000416372 TRPM1Q7Z4N2 1603 aa25.41■■□□□ 1.66
RTN4R-202ENST00000416372 PPP6R1Q9UPN7 881 aa25.41■■□□□ 1.66
RTN4R-202ENST00000416372 DDX10Q13206 875 aaKnown RBP25.4■■□□□ 1.66
RTN4R-202ENST00000416372 MIER1Q8N108 512 aa25.39■■□□□ 1.66
RTN4R-202ENST00000416372 CARD11Q9BXL7 1154 aa25.39■■□□□ 1.66
RTN4R-202ENST00000416372 NOS1P29475 1434 aa25.39■■□□□ 1.65
RTN4R-202ENST00000416372 STAC3Q96MF2 364 aa25.39■■□□□ 1.65
RTN4R-202ENST00000416372 USP47Q96K76 1375 aa25.38■■□□□ 1.65
RTN4R-202ENST00000416372 ROCK2O75116 1388 aaKnown RBP25.38■■□□□ 1.65
RTN4R-202ENST00000416372 MLECQ14165 292 aa25.35■■□□□ 1.65
RTN4R-202ENST00000416372 MROH2AA6NES4 1674 aa25.34■■□□□ 1.65
RTN4R-202ENST00000416372 SYNMO15061 1565 aa25.34■■□□□ 1.65
RTN4R-202ENST00000416372 CHGAP10645 457 aaKnown RBP25.33■■□□□ 1.65
RTN4R-202ENST00000416372 CLTCQ00610 1675 aaKnown RBP25.33■■□□□ 1.64
RTN4R-202ENST00000416372 ADGRB3O60242 1522 aa25.33■■□□□ 1.64
RTN4R-202ENST00000416372 MADDQ8WXG6 1647 aa25.32■■□□□ 1.64
RTN4R-202ENST00000416372 PREX1Q8TCU6 1659 aa25.32■■□□□ 1.64
RTN4R-202ENST00000416372 PIK3C2BO00750 1634 aa25.31■■□□□ 1.64
RTN4R-202ENST00000416372 WASHC2AQ641Q2 1341 aa25.3■■□□□ 1.64
RTN4R-202ENST00000416372 NBPF1Q3BBV0 1214 aa25.29■■□□□ 1.64
RTN4R-202ENST00000416372 ARID4BQ4LE39 1312 aaPredicted RBP25.29■■□□□ 1.64
RTN4R-202ENST00000416372 GPRASP1Q5JY77 1395 aa25.29■■□□□ 1.64
RTN4R-202ENST00000416372 LAMC1P11047 1609 aa25.28■■□□□ 1.64
RTN4R-202ENST00000416372 IFT172Q9UG01 1749 aa25.28■■□□□ 1.64
RTN4R-202ENST00000416372 MYOM2P54296 1465 aa25.26■■□□□ 1.64
RTN4R-202ENST00000416372 ESF1Q9H501 851 aaKnown RBP25.26■■□□□ 1.63
RTN4R-202ENST00000416372 CCDC7Q96M83 1385 aa25.26■■□□□ 1.63
RTN4R-202ENST00000416372 POLR1AO95602 1720 aaPredicted RBP25.26■■□□□ 1.63
RTN4R-202ENST00000416372 C11orf95C9JLR9 678 aaPredicted RBP25.26■■□□□ 1.63
RTN4R-202ENST00000416372 SLC52A1Q9NWF4 448 aa25.26■■□□□ 1.63
RTN4R-202ENST00000416372 ERVK-7P63135 1459 aa25.24■■□□□ 1.63
RTN4R-202ENST00000416372 FBXO31Q5XUX0 539 aaPredicted RBP25.23■■□□□ 1.63
RTN4R-202ENST00000416372 IDI1Q13907 227 aa25.22■■□□□ 1.63
RTN4R-202ENST00000416372 RPGRIP1LQ68CZ1 1315 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms