RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
PTPRK-209ENST00000415046 DDX12PQ92771 950 aa11.31□□□□□ -0.6
PTPRK-209ENST00000415046 BHMG1C9JSJ3 638 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-209ENST00000415046 COL9A1P20849 921 aa11.3□□□□□ -0.6
PTPRK-209ENST00000415046 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
PTPRK-209ENST00000415046 C6orf132Q5T0Z8 1188 aa11.27□□□□□ -0.61
PTPRK-209ENST00000415046 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
PTPRK-209ENST00000415046 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-209ENST00000415046 NBR1Q14596 966 aa11.26□□□□□ -0.61
PTPRK-209ENST00000415046 PROX2Q3B8N5 592 aa11.25□□□□□ -0.61
PTPRK-209ENST00000415046 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
PTPRK-209ENST00000415046 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
PTPRK-209ENST00000415046 NBPF3Q9H094 633 aa11.25□□□□□ -0.61
PTPRK-209ENST00000415046 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
PTPRK-209ENST00000415046 RABGEF1Q9UJ41 708 aa11.23□□□□□ -0.61
PTPRK-209ENST00000415046 MAP3K7O43318 606 aa11.2□□□□□ -0.62
PTPRK-209ENST00000415046 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-209ENST00000415046 PLCB2Q00722 1185 aa11.2□□□□□ -0.62
PTPRK-209ENST00000415046 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
PTPRK-209ENST00000415046 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
PTPRK-209ENST00000415046 GRXCR2A6NFK2 248 aa11.18□□□□□ -0.62
PTPRK-209ENST00000415046 GOLGA8CPA6NN73 597 aa11.18□□□□□ -0.62
PTPRK-209ENST00000415046 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
PTPRK-209ENST00000415046 TRIM6-TRIM34B2RNG4 842 aa11.17□□□□□ -0.62
PTPRK-209ENST00000415046 THSD4Q6ZMP0 1018 aa11.17□□□□□ -0.62
PTPRK-209ENST00000415046 ARHGEF1Q92888 912 aaKnown RBP11.17□□□□□ -0.62
PTPRK-209ENST00000415046 WNT2BQ93097 391 aa11.16□□□□□ -0.62
PTPRK-209ENST00000415046 KIAA1468Q9P260 1216 aa11.16□□□□□ -0.62
PTPRK-209ENST00000415046 OSBPP22059 807 aa11.15□□□□□ -0.62
PTPRK-209ENST00000415046 LAPTM4BQ86VI4 370 aa11.15□□□□□ -0.62
PTPRK-209ENST00000415046 PTPN5P54829 565 aa11.12□□□□□ -0.63
PTPRK-209ENST00000415046 CERKQ8TCT0 537 aa11.12□□□□□ -0.63
PTPRK-209ENST00000415046 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
PTPRK-209ENST00000415046 ANKK1Q8NFD2 765 aa11.11□□□□□ -0.63
PTPRK-209ENST00000415046 PLA2G2EQ9NZK7 142 aa11.11□□□□□ -0.63
PTPRK-209ENST00000415046 TSKSQ9UJT2 592 aa11.11□□□□□ -0.63
PTPRK-209ENST00000415046 SEPT9Q9UHD8 586 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-209ENST00000415046 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
PTPRK-209ENST00000415046 PRSS12P56730 875 aa11.08□□□□□ -0.64
PTPRK-209ENST00000415046 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
PTPRK-209ENST00000415046 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
PTPRK-209ENST00000415046 ZFRQ96KR1 1074 aaKnown RBP11.08□□□□□ -0.64
PTPRK-209ENST00000415046 PACS2Q86VP3 889 aa11.07□□□□□ -0.64
PTPRK-209ENST00000415046 MLLT3P42568 568 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-209ENST00000415046 RBM27Q9P2N5 1060 aaKnown RBP11.06□□□□□ -0.64
PTPRK-209ENST00000415046 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
PTPRK-209ENST00000415046 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
PTPRK-209ENST00000415046 BCAMP50895 628 aa11.04□□□□□ -0.64
PTPRK-209ENST00000415046 NPDC1Q9NQX5 325 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-209ENST00000415046 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
PTPRK-209ENST00000415046 TTC13Q8NBP0 860 aa11□□□□□ -0.65
PTPRK-209ENST00000415046 C3orf80F5H4A9 247 aa10.99□□□□□ -0.65
PTPRK-209ENST00000415046 SMAPO00193 183 aa10.98□□□□□ -0.65
PTPRK-209ENST00000415046 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-209ENST00000415046 IFFO2Q5TF58 517 aa10.98□□□□□ -0.65
PTPRK-209ENST00000415046 NYAP1Q6ZVC0 841 aa10.98□□□□□ -0.65
PTPRK-209ENST00000415046 TATDN2Q93075 761 aa10.98□□□□□ -0.65
PTPRK-209ENST00000415046 LRCH3Q96II8 777 aa10.98□□□□□ -0.65
PTPRK-209ENST00000415046 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-209ENST00000415046 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
PTPRK-209ENST00000415046 SEMA3EO15041 775 aa10.96□□□□□ -0.65
PTPRK-209ENST00000415046 PADI6Q6TGC4 694 aa10.96□□□□□ -0.65
PTPRK-209ENST00000415046 WBP1LQ9NX94 342 aa10.96□□□□□ -0.65
PTPRK-209ENST00000415046 TSR3Q9UJK0 312 aaKnown RBP10.95□□□□□ -0.66
PTPRK-209ENST00000415046 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
PTPRK-209ENST00000415046 HPS5Q9UPZ3 1129 aa10.94□□□□□ -0.66
PTPRK-209ENST00000415046 PTGDRQ13258 359 aa10.93□□□□□ -0.66
PTPRK-209ENST00000415046 SAMD7Q7Z3H4 446 aa10.93□□□□□ -0.66
PTPRK-209ENST00000415046 ITGBL1O95965 494 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-209ENST00000415046 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
PTPRK-209ENST00000415046 TESPA1A2RU30 521 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-209ENST00000415046 NUTM2FA1L443 756 aa10.88□□□□□ -0.67
PTPRK-209ENST00000415046 A0A0G2JS52 829 aa10.86□□□□□ -0.67
PTPRK-209ENST00000415046 PPP4CP60510 307 aa10.86□□□□□ -0.67
PTPRK-209ENST00000415046 EYA1Q99502 592 aa10.86□□□□□ -0.67
PTPRK-209ENST00000415046 FCHSD2O94868 740 aa10.84□□□□□ -0.67
PTPRK-209ENST00000415046 HDGFP51858 240 aaKnown RBP10.84□□□□□ -0.67
PTPRK-209ENST00000415046 SWT1Q5T5J6 900 aaKnown RBP10.83□□□□□ -0.68
PTPRK-209ENST00000415046 SMYD5Q6GMV2 418 aa10.83□□□□□ -0.68
PTPRK-209ENST00000415046 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
PTPRK-209ENST00000415046 ADGRG1Q9Y653 693 aa10.82□□□□□ -0.68
PTPRK-209ENST00000415046 KCNC4Q03721 635 aa10.81□□□□□ -0.68
PTPRK-209ENST00000415046 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
PTPRK-209ENST00000415046 RNF40O75150 1001 aa10.8□□□□□ -0.68
PTPRK-209ENST00000415046 SLF2Q8IX21 1173 aa10.8□□□□□ -0.68
PTPRK-209ENST00000415046 RBM46Q8TBY0 533 aaKnown RBP10.8□□□□□ -0.68
PTPRK-209ENST00000415046 NECTIN2Q92692 538 aa10.8□□□□□ -0.68
PTPRK-209ENST00000415046 RGS20O76081 388 aa10.79□□□□□ -0.68
PTPRK-209ENST00000415046 DNAJB2P25686 324 aa10.78□□□□□ -0.68
PTPRK-209ENST00000415046 HIC1Q14526 733 aa10.78□□□□□ -0.68
PTPRK-209ENST00000415046 GPR37O15354 613 aa10.77□□□□□ -0.69
PTPRK-209ENST00000415046 APLP1P51693 650 aa10.76□□□□□ -0.69
PTPRK-209ENST00000415046 TJAP1Q5JTD0 557 aa10.76□□□□□ -0.69
PTPRK-209ENST00000415046 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
PTPRK-209ENST00000415046 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
PTPRK-209ENST00000415046 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
PTPRK-209ENST00000415046 MTRQ99707 1265 aa10.74□□□□□ -0.69
PTPRK-209ENST00000415046 RCCD1A6NED2 376 aa10.73□□□□□ -0.69
PTPRK-209ENST00000415046 IL21Q9HBE4 155 aa10.73□□□□□ -0.69
PTPRK-209ENST00000415046 GNPATO15228 680 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms