RNA–Protein interactions for RNA: ENST00000414817.2

PCNPP4-201, Transcript of PEST containing nuclear protein pseudogene 4, humanhuman

BASIC

Gene PCNPP4, Length 517 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP4-201ENST00000414817 VPS9D1Q9Y2B5 631 aa13.07□□□□□ -0.32
PCNPP4-201ENST00000414817 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
PCNPP4-201ENST00000414817 ZBED2Q9BTP6 218 aa13.05□□□□□ -0.32
PCNPP4-201ENST00000414817 NBR1Q14596 966 aa13.03□□□□□ -0.32
PCNPP4-201ENST00000414817 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
PCNPP4-201ENST00000414817 KCNV2Q8TDN2 545 aa13.02□□□□□ -0.33
PCNPP4-201ENST00000414817 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
PCNPP4-201ENST00000414817 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
PCNPP4-201ENST00000414817 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
PCNPP4-201ENST00000414817 COL9A1P20849 921 aa13□□□□□ -0.33
PCNPP4-201ENST00000414817 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
PCNPP4-201ENST00000414817 P3H3Q8IVL6 736 aa12.99□□□□□ -0.33
PCNPP4-201ENST00000414817 GRXCR2A6NFK2 248 aa12.97□□□□□ -0.33
PCNPP4-201ENST00000414817 MAP3K7O43318 606 aa12.97□□□□□ -0.33
PCNPP4-201ENST00000414817 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
PCNPP4-201ENST00000414817 BHMG1C9JSJ3 638 aaPredicted RBP12.95□□□□□ -0.34
PCNPP4-201ENST00000414817 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
PCNPP4-201ENST00000414817 PROX2Q3B8N5 592 aa12.93□□□□□ -0.34
PCNPP4-201ENST00000414817 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
PCNPP4-201ENST00000414817 TSR1Q2NL82 804 aaKnown RBP12.92□□□□□ -0.34
PCNPP4-201ENST00000414817 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
PCNPP4-201ENST00000414817 OSBPP22059 807 aa12.9□□□□□ -0.34
PCNPP4-201ENST00000414817 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
PCNPP4-201ENST00000414817 KCTD12Q96CX2 325 aaKnown RBP12.9□□□□□ -0.34
PCNPP4-201ENST00000414817 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
PCNPP4-201ENST00000414817 HCSTQ9UBK5 93 aa12.89□□□□□ -0.35
PCNPP4-201ENST00000414817 GOLGA8CPA6NN73 597 aa12.88□□□□□ -0.35
PCNPP4-201ENST00000414817 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
PCNPP4-201ENST00000414817 CERKQ8TCT0 537 aa12.86□□□□□ -0.35
PCNPP4-201ENST00000414817 KIAA1468Q9P260 1216 aa12.85□□□□□ -0.35
PCNPP4-201ENST00000414817 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
PCNPP4-201ENST00000414817 LAPTM4BQ86VI4 370 aa12.83□□□□□ -0.36
PCNPP4-201ENST00000414817 WNT2BQ93097 391 aa12.83□□□□□ -0.36
PCNPP4-201ENST00000414817 CDHR5Q9HBB8 845 aa12.82□□□□□ -0.36
PCNPP4-201ENST00000414817 THSD4Q6ZMP0 1018 aa12.8□□□□□ -0.36
PCNPP4-201ENST00000414817 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
PCNPP4-201ENST00000414817 PRSS12P56730 875 aa12.79□□□□□ -0.36
PCNPP4-201ENST00000414817 PACS2Q86VP3 889 aa12.79□□□□□ -0.36
PCNPP4-201ENST00000414817 TSKSQ9UJT2 592 aa12.79□□□□□ -0.36
PCNPP4-201ENST00000414817 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
PCNPP4-201ENST00000414817 ANKK1Q8NFD2 765 aa12.78□□□□□ -0.36
PCNPP4-201ENST00000414817 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
PCNPP4-201ENST00000414817 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
PCNPP4-201ENST00000414817 SEMA3EO15041 775 aa12.76□□□□□ -0.37
PCNPP4-201ENST00000414817 PTPN5P54829 565 aa12.76□□□□□ -0.37
PCNPP4-201ENST00000414817 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
PCNPP4-201ENST00000414817 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
PCNPP4-201ENST00000414817 ZFRQ96KR1 1074 aaKnown RBP12.75□□□□□ -0.37
PCNPP4-201ENST00000414817 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
PCNPP4-201ENST00000414817 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
PCNPP4-201ENST00000414817 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
PCNPP4-201ENST00000414817 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
PCNPP4-201ENST00000414817 SOWAHBA6NEL2 793 aa12.69□□□□□ -0.38
PCNPP4-201ENST00000414817 BCAMP50895 628 aa12.68□□□□□ -0.38
PCNPP4-201ENST00000414817 PADI6Q6TGC4 694 aa12.68□□□□□ -0.38
PCNPP4-201ENST00000414817 TTC13Q8NBP0 860 aa12.68□□□□□ -0.38
PCNPP4-201ENST00000414817 TATDN2Q93075 761 aa12.68□□□□□ -0.38
PCNPP4-201ENST00000414817 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
PCNPP4-201ENST00000414817 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
PCNPP4-201ENST00000414817 SMAPO00193 183 aa12.67□□□□□ -0.38
PCNPP4-201ENST00000414817 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
PCNPP4-201ENST00000414817 PTGDRQ13258 359 aa12.66□□□□□ -0.38
PCNPP4-201ENST00000414817 SMYD5Q6GMV2 418 aa12.66□□□□□ -0.38
PCNPP4-201ENST00000414817 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
PCNPP4-201ENST00000414817 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.65□□□□□ -0.38
PCNPP4-201ENST00000414817 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
PCNPP4-201ENST00000414817 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
PCNPP4-201ENST00000414817 NYAP1Q6ZVC0 841 aa12.61□□□□□ -0.39
PCNPP4-201ENST00000414817 FCHSD2O94868 740 aa12.6□□□□□ -0.39
PCNPP4-201ENST00000414817 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
PCNPP4-201ENST00000414817 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
PCNPP4-201ENST00000414817 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
PCNPP4-201ENST00000414817 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
PCNPP4-201ENST00000414817 WBP1LQ9NX94 342 aa12.58□□□□□ -0.4
PCNPP4-201ENST00000414817 HDGFP51858 240 aaKnown RBP12.56□□□□□ -0.4
PCNPP4-201ENST00000414817 EYA1Q99502 592 aa12.54□□□□□ -0.4
PCNPP4-201ENST00000414817 PPP4CP60510 307 aa12.52□□□□□ -0.41
PCNPP4-201ENST00000414817 HIC1Q14526 733 aa12.52□□□□□ -0.41
PCNPP4-201ENST00000414817 IFFO2Q5TF58 517 aa12.52□□□□□ -0.41
PCNPP4-201ENST00000414817 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.41
PCNPP4-201ENST00000414817 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.41
PCNPP4-201ENST00000414817 RNF40O75150 1001 aa12.5□□□□□ -0.41
PCNPP4-201ENST00000414817 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
PCNPP4-201ENST00000414817 SWT1Q5T5J6 900 aaKnown RBP12.49□□□□□ -0.41
PCNPP4-201ENST00000414817 TULP1O00294 542 aaPredicted RBP12.48□□□□□ -0.41
PCNPP4-201ENST00000414817 DNAJB2P25686 324 aa12.48□□□□□ -0.41
PCNPP4-201ENST00000414817 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
PCNPP4-201ENST00000414817 SLF2Q8IX21 1173 aa12.48□□□□□ -0.41
PCNPP4-201ENST00000414817 NECTIN2Q92692 538 aa12.48□□□□□ -0.41
PCNPP4-201ENST00000414817 GPR37O15354 613 aa12.47□□□□□ -0.41
PCNPP4-201ENST00000414817 GNPATO15228 680 aa12.46□□□□□ -0.41
PCNPP4-201ENST00000414817 GPIHBP1Q8IV16 184 aa12.46□□□□□ -0.41
PCNPP4-201ENST00000414817 FAM161AQ3B820 660 aa12.45□□□□□ -0.42
PCNPP4-201ENST00000414817 OATP04181 439 aa12.43□□□□□ -0.42
PCNPP4-201ENST00000414817 TMEM134Q9H6X4 195 aa12.43□□□□□ -0.42
PCNPP4-201ENST00000414817 RCCD1A6NED2 376 aa12.42□□□□□ -0.42
PCNPP4-201ENST00000414817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
PCNPP4-201ENST00000414817 KCNC4Q03721 635 aa12.41□□□□□ -0.42
PCNPP4-201ENST00000414817 A0A0G2JS52 829 aa12.4□□□□□ -0.42
PCNPP4-201ENST00000414817 PXYLP1Q8TE99 480 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms