RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.32■■■□□ 2.12
SPRN-201ENST00000414069 CCDC144AA2RUR9 1427 aa28.31■■■□□ 2.12
SPRN-201ENST00000414069 TMC1Q8TDI8 760 aa28.3■■■□□ 2.12
SPRN-201ENST00000414069 SHANK2Q9UPX8 1470 aa28.3■■■□□ 2.12
SPRN-201ENST00000414069 EFCAB2Q5VUJ9 269 aa28.29■■■□□ 2.12
SPRN-201ENST00000414069 FAM135AQ9P2D6 1515 aa28.28■■■□□ 2.12
SPRN-201ENST00000414069 DHX29Q7Z478 1369 aaKnown RBP28.27■■■□□ 2.12
SPRN-201ENST00000414069 RSPH4AQ5TD94 716 aa28.26■■■□□ 2.11
SPRN-201ENST00000414069 ARHGEF12Q9NZN5 1544 aa28.25■■■□□ 2.11
SPRN-201ENST00000414069 CC2D1BQ5T0F9 858 aaKnown RBP28.22■■■□□ 2.11
SPRN-201ENST00000414069 PREX2Q70Z35 1606 aa28.22■■■□□ 2.11
SPRN-201ENST00000414069 TRAPPC8Q9Y2L5 1435 aa28.21■■■□□ 2.11
SPRN-201ENST00000414069 B4GALNT3Q6L9W6 998 aa28.21■■■□□ 2.11
SPRN-201ENST00000414069 ABCC2Q92887 1545 aa28.2■■■□□ 2.11
SPRN-201ENST00000414069 SPAG9O60271 1321 aaKnown RBP28.19■■■□□ 2.1
SPRN-201ENST00000414069 NBR1Q14596 966 aa28.18■■■□□ 2.1
SPRN-201ENST00000414069 SENP3Q9H4L4 574 aaPredicted RBP28.18■■■□□ 2.1
SPRN-201ENST00000414069 ARHGEF5Q12774 1597 aa28.17■■■□□ 2.1
SPRN-201ENST00000414069 KDM5CP41229 1560 aa28.16■■■□□ 2.1
SPRN-201ENST00000414069 PLA2R1Q13018 1463 aa28.16■■■□□ 2.1
SPRN-201ENST00000414069 RALGAPBQ86X10 1494 aa28.16■■■□□ 2.1
SPRN-201ENST00000414069 ZBED9Q6R2W3 1325 aa28.15■■■□□ 2.1
SPRN-201ENST00000414069 KIF3BO15066 747 aa28.12■■■□□ 2.09
SPRN-201ENST00000414069 UHRF1BP1Q6BDS2 1440 aa28.11■■■□□ 2.09
SPRN-201ENST00000414069 RTN4Q9NQC3 1192 aaKnown RBP28.11■■■□□ 2.09
SPRN-201ENST00000414069 PLCH2O75038 1416 aa28.09■■■□□ 2.09
SPRN-201ENST00000414069 PNISRQ8TF01 805 aaKnown RBP28.07■■■□□ 2.08
SPRN-201ENST00000414069 PRAG1Q86YV5 1406 aa28.07■■■□□ 2.08
SPRN-201ENST00000414069 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
SPRN-201ENST00000414069 A2MP01023 1474 aa28.06■■■□□ 2.08
SPRN-201ENST00000414069 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.06■■■□□ 2.08
SPRN-201ENST00000414069 KDM5DQ9BY66 1539 aa28.05■■■□□ 2.08
SPRN-201ENST00000414069 ZCCHC11Q5TAX3 1644 aaKnown RBP28.05■■■□□ 2.08
SPRN-201ENST00000414069 MYO5CQ9NQX4 1742 aa28.05■■■□□ 2.08
SPRN-201ENST00000414069 PANK3Q9H999 370 aa28.04■■■□□ 2.08
SPRN-201ENST00000414069 DISP3Q9P2K9 1392 aa28.04■■■□□ 2.08
SPRN-201ENST00000414069 CHGAP10645 457 aaKnown RBP28.04■■■□□ 2.08
SPRN-201ENST00000414069 SCAPERQ9BY12 1400 aa28.01■■■□□ 2.07
SPRN-201ENST00000414069 TESK2Q96S53 571 aa27.98■■■□□ 2.07
SPRN-201ENST00000414069 MYBBP1AQ9BQG0 1328 aaKnown RBP27.96■■■□□ 2.07
SPRN-201ENST00000414069 ARID4BQ4LE39 1312 aaPredicted RBP27.95■■■□□ 2.07
SPRN-201ENST00000414069 PPP4R2Q9NY27 417 aa27.95■■■□□ 2.07
SPRN-201ENST00000414069 FANCIQ9NVI1 1328 aa27.93■■■□□ 2.06
SPRN-201ENST00000414069 POLR1AO95602 1720 aaPredicted RBP27.93■■■□□ 2.06
SPRN-201ENST00000414069 NUDCQ9Y266 331 aa27.93■■■□□ 2.06
SPRN-201ENST00000414069 DUOX2Q9NRD8 1548 aa27.93■■■□□ 2.06
SPRN-201ENST00000414069 TMF1P82094 1093 aa27.92■■■□□ 2.06
SPRN-201ENST00000414069 GGT6Q6P531 493 aa27.92■■■□□ 2.06
SPRN-201ENST00000414069 CLASP1Q7Z460 1538 aa27.91■■■□□ 2.06
SPRN-201ENST00000414069 KTN1Q86UP2 1357 aaKnown RBP27.91■■■□□ 2.06
SPRN-201ENST00000414069 RALBP1Q15311 655 aa27.89■■■□□ 2.06
SPRN-201ENST00000414069 PER1O15534 1290 aaPredicted RBP27.89■■■□□ 2.05
SPRN-201ENST00000414069 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.05
SPRN-201ENST00000414069 FANCAO15360 1455 aa27.88■■■□□ 2.05
SPRN-201ENST00000414069 NPM1P06748 294 aaKnown RBP eCLIP27.88■■■□□ 2.05
SPRN-201ENST00000414069 CDCA7LQ96GN5 454 aa27.87■■■□□ 2.05
SPRN-201ENST00000414069 ABCC1P33527 1531 aa27.87■■■□□ 2.05
SPRN-201ENST00000414069 CFAP70Q5T0N1 1121 aa27.86■■■□□ 2.05
SPRN-201ENST00000414069 IL27Q8NEV9 243 aa27.86■■■□□ 2.05
SPRN-201ENST00000414069 NLRP13Q86W25 1043 aa27.85■■■□□ 2.05
SPRN-201ENST00000414069 ERBINQ96RT1 1412 aa27.85■■■□□ 2.05
SPRN-201ENST00000414069 UNC13BO14795 1591 aa27.85■■■□□ 2.05
SPRN-201ENST00000414069 TRPM1Q7Z4N2 1603 aa27.83■■■□□ 2.05
SPRN-201ENST00000414069 MAST1Q9Y2H9 1570 aa27.83■■■□□ 2.05
SPRN-201ENST00000414069 WDR7Q9Y4E6 1490 aa27.82■■■□□ 2.04
SPRN-201ENST00000414069 ADGRL1O94910 1474 aa27.81■■■□□ 2.04
SPRN-201ENST00000414069 PLXNC1O60486 1568 aa27.8■■■□□ 2.04
SPRN-201ENST00000414069 IQGAP3Q86VI3 1631 aa27.8■■■□□ 2.04
SPRN-201ENST00000414069 ASXL2Q76L83 1435 aa27.8■■■□□ 2.04
SPRN-201ENST00000414069 UGGT1Q9NYU2 1555 aa27.78■■■□□ 2.04
SPRN-201ENST00000414069 BRD4O60885 1362 aaPredicted RBP27.78■■■□□ 2.04
SPRN-201ENST00000414069 KNSTRNQ9Y448 316 aa27.78■■■□□ 2.04
SPRN-201ENST00000414069 UHRF1BP1LA0JNW5 1464 aa27.77■■■□□ 2.04
SPRN-201ENST00000414069 ADGRF5Q8IZF2 1346 aa27.77■■■□□ 2.04
SPRN-201ENST00000414069 KANK1Q14678 1352 aa27.77■■■□□ 2.04
SPRN-201ENST00000414069 RAPGEF3O95398 923 aa27.76■■■□□ 2.04
SPRN-201ENST00000414069 SMG6Q86US8 1419 aaKnown RBP27.76■■■□□ 2.03
SPRN-201ENST00000414069 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
SPRN-201ENST00000414069 ATP10AO60312 1499 aa27.75■■■□□ 2.03
SPRN-201ENST00000414069 PLIN1O60240 522 aa27.75■■■□□ 2.03
SPRN-201ENST00000414069 CFAP65Q6ZU64 1925 aaKnown RBP27.75■■■□□ 2.03
SPRN-201ENST00000414069 GPRASP1Q5JY77 1395 aa27.75■■■□□ 2.03
SPRN-201ENST00000414069 PAK3O75914 559 aaPredicted RBP27.74■■■□□ 2.03
SPRN-201ENST00000414069 ZFYVE16Q7Z3T8 1539 aa27.73■■■□□ 2.03
SPRN-201ENST00000414069 COL17A1Q9UMD9 1497 aaPredicted RBP27.73■■■□□ 2.03
SPRN-201ENST00000414069 PARD3Q8TEW0 1356 aa27.72■■■□□ 2.03
SPRN-201ENST00000414069 TNNT2P45379 298 aaPredicted RBP27.7■■■□□ 2.02
SPRN-201ENST00000414069 ADAMTS8Q9UP79 889 aa27.7■■■□□ 2.02
SPRN-201ENST00000414069 E9PCH4 1651 aa27.7■■■□□ 2.02
SPRN-201ENST00000414069 TMEM132EQ6IEE7 984 aa27.7■■■□□ 2.02
SPRN-201ENST00000414069 TRAK1Q9UPV9 953 aa27.69■■■□□ 2.02
SPRN-201ENST00000414069 LRPPRCP42704 1394 aaKnown RBP27.68■■■□□ 2.02
SPRN-201ENST00000414069 ATP7AQ04656 1500 aa27.68■■■□□ 2.02
SPRN-201ENST00000414069 CCDC146Q8IYE0 955 aa27.67■■■□□ 2.02
SPRN-201ENST00000414069 EXOC6Q8TAG9 804 aa27.67■■■□□ 2.02
SPRN-201ENST00000414069 MAGI2Q86UL8 1455 aa27.66■■■□□ 2.02
SPRN-201ENST00000414069 RCAN3Q9UKA8 241 aa27.66■■■□□ 2.02
SPRN-201ENST00000414069 SAFB2Q14151 953 aaKnown RBP eCLIP27.65■■■□□ 2.02
SPRN-201ENST00000414069 PRDM15P57071 1507 aaPredicted RBP27.65■■■□□ 2.02
SPRN-201ENST00000414069 NOP58Q9Y2X3 529 aaKnown RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms