RNA–Protein interactions for RNA: ENST00000413945.5

LINC00472-201, long intergenic non-protein coding RNA 472, humanhuman

TSL 3

Gene LINC00472, Length 662 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-201ENST00000413945 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.72
LINC00472-201ENST00000413945 MLECQ14165 292 aa10.52□□□□□ -0.73
LINC00472-201ENST00000413945 ZFYVE16Q7Z3T8 1539 aa10.52□□□□□ -0.73
LINC00472-201ENST00000413945 EFCAB5A4FU69 1503 aa10.51□□□□□ -0.73
LINC00472-201ENST00000413945 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
LINC00472-201ENST00000413945 C3P01024 1663 aa10.5□□□□□ -0.73
LINC00472-201ENST00000413945 PLA2R1Q13018 1463 aa10.49□□□□□ -0.73
LINC00472-201ENST00000413945 SPNS2Q8IVW8 549 aa10.49□□□□□ -0.73
LINC00472-201ENST00000413945 NCKAP5LQ9HCH0 1330 aa10.49□□□□□ -0.73
LINC00472-201ENST00000413945 TRAPPC8Q9Y2L5 1435 aa10.49□□□□□ -0.73
LINC00472-201ENST00000413945 DENND4BO75064 1496 aaPredicted RBP10.48□□□□□ -0.73
LINC00472-201ENST00000413945 MAGI2Q86UL8 1455 aa10.48□□□□□ -0.73
LINC00472-201ENST00000413945 RBM33Q96EV2 1170 aaKnown RBP10.47□□□□□ -0.73
LINC00472-201ENST00000413945 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
LINC00472-201ENST00000413945 TRPC6Q9Y210 931 aa10.47□□□□□ -0.73
LINC00472-201ENST00000413945 COLQQ9Y215 455 aaPredicted RBP10.47□□□□□ -0.73
LINC00472-201ENST00000413945 ST18O60284 1047 aa10.46□□□□□ -0.73
LINC00472-201ENST00000413945 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
LINC00472-201ENST00000413945 RAPGEF2Q9Y4G8 1499 aa10.45□□□□□ -0.74
LINC00472-201ENST00000413945 PKD2Q13563 968 aa10.45□□□□□ -0.74
LINC00472-201ENST00000413945 IQGAP2Q13576 1575 aa10.44□□□□□ -0.74
LINC00472-201ENST00000413945 LRRC7Q96NW7 1537 aa10.44□□□□□ -0.74
LINC00472-201ENST00000413945 SHANK2Q9UPX8 1470 aa10.43□□□□□ -0.74
LINC00472-201ENST00000413945 LRP5O75197 1615 aa10.43□□□□□ -0.74
LINC00472-201ENST00000413945 CCDC61Q9Y6R9 512 aa10.41□□□□□ -0.74
LINC00472-201ENST00000413945 CDK12Q9NYV4 1490 aaPredicted RBP10.41□□□□□ -0.74
LINC00472-201ENST00000413945 ABCA8O94911 1581 aa10.4□□□□□ -0.74
LINC00472-201ENST00000413945 C9orf84Q5VXU9 1444 aa10.4□□□□□ -0.75
LINC00472-201ENST00000413945 ZNF142P52746 1687 aaPredicted RBP10.39□□□□□ -0.75
LINC00472-201ENST00000413945 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
LINC00472-201ENST00000413945 HECW1Q76N89 1606 aa10.39□□□□□ -0.75
LINC00472-201ENST00000413945 RNF17Q9BXT8 1623 aaKnown RBP10.39□□□□□ -0.75
LINC00472-201ENST00000413945 ATP10AO60312 1499 aa10.38□□□□□ -0.75
LINC00472-201ENST00000413945 UGGT2Q9NYU1 1516 aa10.38□□□□□ -0.75
LINC00472-201ENST00000413945 VWDEQ8N2E2 1590 aa10.37□□□□□ -0.75
LINC00472-201ENST00000413945 TRIM52Q96A61 297 aa10.37□□□□□ -0.75
LINC00472-201ENST00000413945 NPATQ14207 1427 aa10.36□□□□□ -0.75
LINC00472-201ENST00000413945 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
LINC00472-201ENST00000413945 SLC34A2O95436 690 aa10.35□□□□□ -0.75
LINC00472-201ENST00000413945 IGF1RP08069 1367 aa10.34□□□□□ -0.75
LINC00472-201ENST00000413945 RAPGEF6Q8TEU7 1601 aa10.33□□□□□ -0.76
LINC00472-201ENST00000413945 NEURL4Q96JN8 1562 aa10.33□□□□□ -0.76
LINC00472-201ENST00000413945 TIE1P35590 1138 aa10.32□□□□□ -0.76
LINC00472-201ENST00000413945 YY1P25490 414 aa10.31□□□□□ -0.76
LINC00472-201ENST00000413945 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
LINC00472-201ENST00000413945 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
LINC00472-201ENST00000413945 MYO3AQ8NEV4 1616 aa10.31□□□□□ -0.76
LINC00472-201ENST00000413945 CFAP74Q9C0B2 1584 aa10.31□□□□□ -0.76
LINC00472-201ENST00000413945 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
LINC00472-201ENST00000413945 SUPT6HQ7KZ85 1726 aaKnown RBP10.3□□□□□ -0.76
LINC00472-201ENST00000413945 CEP350Q5VT06 3117 aa10.3□□□□□ -0.76
LINC00472-201ENST00000413945 SEC24BO95487 1268 aa10.3□□□□□ -0.76
LINC00472-201ENST00000413945 AGLP35573 1532 aa10.29□□□□□ -0.76
LINC00472-201ENST00000413945 TTLL13PA6NNM8 815 aa10.29□□□□□ -0.76
LINC00472-201ENST00000413945 FAM135BQ49AJ0 1406 aa10.29□□□□□ -0.76
LINC00472-201ENST00000413945 SYNMO15061 1565 aa10.28□□□□□ -0.76
LINC00472-201ENST00000413945 REREQ9P2R6 1566 aa10.28□□□□□ -0.76
LINC00472-201ENST00000413945 MAP3K13O43283 966 aa10.28□□□□□ -0.76
LINC00472-201ENST00000413945 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
LINC00472-201ENST00000413945 ATP10BO94823 1461 aa10.28□□□□□ -0.76
LINC00472-201ENST00000413945 POLR1AO95602 1720 aaPredicted RBP10.27□□□□□ -0.76
LINC00472-201ENST00000413945 STRCP1A6NGW2 1772 aa10.27□□□□□ -0.77
LINC00472-201ENST00000413945 SENP3-EIF4A1A0A087X0R7 540 aa10.27□□□□□ -0.77
LINC00472-201ENST00000413945 EP400Q96L91 3159 aa10.26□□□□□ -0.77
LINC00472-201ENST00000413945 RXRBP28702 533 aa10.26□□□□□ -0.77
LINC00472-201ENST00000413945 CNTLNQ9NXG0 1405 aa10.25□□□□□ -0.77
LINC00472-201ENST00000413945 MROH2AA6NES4 1674 aa10.25□□□□□ -0.77
LINC00472-201ENST00000413945 LRP6O75581 1613 aa10.25□□□□□ -0.77
LINC00472-201ENST00000413945 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
LINC00472-201ENST00000413945 NHSL1Q5SYE7 1610 aa10.24□□□□□ -0.77
LINC00472-201ENST00000413945 RGS12O14924 1447 aa10.24□□□□□ -0.77
LINC00472-201ENST00000413945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
LINC00472-201ENST00000413945 CDK13Q14004 1512 aaKnown RBP10.23□□□□□ -0.77
LINC00472-201ENST00000413945 IER5LQ5T953 404 aa10.21□□□□□ -0.77
LINC00472-201ENST00000413945 DNMT1P26358 1616 aaKnown RBP10.2□□□□□ -0.78
LINC00472-201ENST00000413945 MARVELD3Q96A59 401 aa10.2□□□□□ -0.78
LINC00472-201ENST00000413945 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
LINC00472-201ENST00000413945 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
LINC00472-201ENST00000413945 DIP2CQ9Y2E4 1556 aa10.19□□□□□ -0.78
LINC00472-201ENST00000413945 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
LINC00472-201ENST00000413945 JCADQ9P266 1359 aa10.19□□□□□ -0.78
LINC00472-201ENST00000413945 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
LINC00472-201ENST00000413945 XIRP1Q702N8 1843 aaKnown RBP10.18□□□□□ -0.78
LINC00472-201ENST00000413945 ROBO1Q9Y6N7 1651 aa10.18□□□□□ -0.78
LINC00472-201ENST00000413945 MED14O60244 1454 aa10.17□□□□□ -0.78
LINC00472-201ENST00000413945 SCAPERQ9BY12 1400 aa10.17□□□□□ -0.78
LINC00472-201ENST00000413945 ATAD2Q6PL18 1390 aa10.17□□□□□ -0.78
LINC00472-201ENST00000413945 A2ML1A8K2U0 1454 aa10.17□□□□□ -0.78
LINC00472-201ENST00000413945 ZMYM3Q14202 1370 aa10.15□□□□□ -0.78
LINC00472-201ENST00000413945 KDM5CP41229 1560 aa10.15□□□□□ -0.78
LINC00472-201ENST00000413945 ESF1Q9H501 851 aaKnown RBP10.15□□□□□ -0.78
LINC00472-201ENST00000413945 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
LINC00472-201ENST00000413945 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
LINC00472-201ENST00000413945 DEPDC5O75140 1603 aa10.14□□□□□ -0.79
LINC00472-201ENST00000413945 C1QTNF8P60827 252 aa10.13□□□□□ -0.79
LINC00472-201ENST00000413945 ABCA6Q8N139 1617 aa10.13□□□□□ -0.79
LINC00472-201ENST00000413945 SPATA31A6Q5VVP1 1343 aa10.12□□□□□ -0.79
LINC00472-201ENST00000413945 POTEB3A0JP26 581 aa10.12□□□□□ -0.79
LINC00472-201ENST00000413945 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
LINC00472-201ENST00000413945 POTEBQ6S5H4 581 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms