RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ITGAEP38570 1179 aa15.68■□□□□ 0.1
NCKIPSD-202ENST00000413374 NPATQ14207 1427 aa15.68■□□□□ 0.1
NCKIPSD-202ENST00000413374 NCKAP5LQ9HCH0 1330 aa15.68■□□□□ 0.1
NCKIPSD-202ENST00000413374 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
NCKIPSD-202ENST00000413374 PREX1Q8TCU6 1659 aa15.67■□□□□ 0.1
NCKIPSD-202ENST00000413374 MAST1Q9Y2H9 1570 aa15.66■□□□□ 0.1
NCKIPSD-202ENST00000413374 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
NCKIPSD-202ENST00000413374 TNRQ92752 1358 aa15.63■□□□□ 0.09
NCKIPSD-202ENST00000413374 MROH2AA6NES4 1674 aa15.62■□□□□ 0.09
NCKIPSD-202ENST00000413374 KDM5DQ9BY66 1539 aa15.62■□□□□ 0.09
NCKIPSD-202ENST00000413374 DUOX2Q9NRD8 1548 aa15.62■□□□□ 0.09
NCKIPSD-202ENST00000413374 SETD1BQ9UPS6 1966 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-202ENST00000413374 SHANK2Q9UPX8 1470 aa15.61■□□□□ 0.09
NCKIPSD-202ENST00000413374 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
NCKIPSD-202ENST00000413374 CERKQ8TCT0 537 aa15.6■□□□□ 0.09
NCKIPSD-202ENST00000413374 DNMT1P26358 1616 aaKnown RBP15.59■□□□□ 0.09
NCKIPSD-202ENST00000413374 FBXO41Q8TF61 875 aa15.59■□□□□ 0.09
NCKIPSD-202ENST00000413374 PZPP20742 1482 aa15.59■□□□□ 0.09
NCKIPSD-202ENST00000413374 CAMSAP1Q5T5Y3 1602 aa15.58■□□□□ 0.09
NCKIPSD-202ENST00000413374 ERBINQ96RT1 1412 aa15.58■□□□□ 0.08
NCKIPSD-202ENST00000413374 ABCC3O15438 1527 aa15.57■□□□□ 0.08
NCKIPSD-202ENST00000413374 KANK1Q14678 1352 aa15.56■□□□□ 0.08
NCKIPSD-202ENST00000413374 STRCQ7RTU9 1775 aa15.56■□□□□ 0.08
NCKIPSD-202ENST00000413374 A2ML1A8K2U0 1454 aa15.55■□□□□ 0.08
NCKIPSD-202ENST00000413374 PTPRTO14522 1441 aa15.55■□□□□ 0.08
NCKIPSD-202ENST00000413374 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.55■□□□□ 0.08
NCKIPSD-202ENST00000413374 PKD2Q13563 968 aa15.55■□□□□ 0.08
NCKIPSD-202ENST00000413374 THEMISQ8N1K5 641 aaPredicted RBP15.55■□□□□ 0.08
NCKIPSD-202ENST00000413374 CEP170BQ9Y4F5 1589 aaPredicted RBP15.54■□□□□ 0.08
NCKIPSD-202ENST00000413374 CROCC2H7BZ55 1655 aa15.54■□□□□ 0.08
NCKIPSD-202ENST00000413374 MYO3AQ8NEV4 1616 aa15.54■□□□□ 0.08
NCKIPSD-202ENST00000413374 RNF17Q9BXT8 1623 aaKnown RBP15.54■□□□□ 0.08
NCKIPSD-202ENST00000413374 MROH1Q8NDA8 1641 aa15.53■□□□□ 0.08
NCKIPSD-202ENST00000413374 ANKRD50Q9ULJ7 1429 aa15.52■□□□□ 0.08
NCKIPSD-202ENST00000413374 ANKLE2Q86XL3 938 aa15.52■□□□□ 0.08
NCKIPSD-202ENST00000413374 EIF2AK4Q9P2K8 1649 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-202ENST00000413374 FAM135AQ9P2D6 1515 aa15.52■□□□□ 0.07
NCKIPSD-202ENST00000413374 ADGRL2O95490 1459 aa15.52■□□□□ 0.07
NCKIPSD-202ENST00000413374 ZNF335Q9H4Z2 1342 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-202ENST00000413374 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
NCKIPSD-202ENST00000413374 ERVK-7P63135 1459 aa15.5■□□□□ 0.07
NCKIPSD-202ENST00000413374 PLA2R1Q13018 1463 aa15.48■□□□□ 0.07
NCKIPSD-202ENST00000413374 NLRP1Q9C000 1473 aa15.48■□□□□ 0.07
NCKIPSD-202ENST00000413374 CEP152O94986 1710 aa15.47■□□□□ 0.07
NCKIPSD-202ENST00000413374 IDI1Q13907 227 aa15.47■□□□□ 0.07
NCKIPSD-202ENST00000413374 ARHGAP31Q2M1Z3 1444 aa15.47■□□□□ 0.07
NCKIPSD-202ENST00000413374 UGGT1Q9NYU2 1555 aa15.47■□□□□ 0.07
NCKIPSD-202ENST00000413374 PRDM15P57071 1507 aaPredicted RBP15.46■□□□□ 0.07
NCKIPSD-202ENST00000413374 ROCK1Q13464 1354 aa15.46■□□□□ 0.07
NCKIPSD-202ENST00000413374 SPATA31D1Q6ZQQ2 1576 aa15.45■□□□□ 0.06
NCKIPSD-202ENST00000413374 TXNDC2Q86VQ3 553 aa15.45■□□□□ 0.06
NCKIPSD-202ENST00000413374 ZNF142P52746 1687 aaPredicted RBP15.44■□□□□ 0.06
NCKIPSD-202ENST00000413374 ZC3H13Q5T200 1668 aaKnown RBP15.44■□□□□ 0.06
NCKIPSD-202ENST00000413374 LTKP29376 864 aa15.43■□□□□ 0.06
NCKIPSD-202ENST00000413374 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
NCKIPSD-202ENST00000413374 NUP155O75694 1391 aa15.42■□□□□ 0.06
NCKIPSD-202ENST00000413374 CFAP65Q6ZU64 1925 aaKnown RBP15.41■□□□□ 0.06
NCKIPSD-202ENST00000413374 CHGAP10645 457 aaKnown RBP15.41■□□□□ 0.06
NCKIPSD-202ENST00000413374 EID1Q9Y6B2 187 aa15.41■□□□□ 0.06
NCKIPSD-202ENST00000413374 DEPDC5O75140 1603 aa15.41■□□□□ 0.06
NCKIPSD-202ENST00000413374 LMTK2Q8IWU2 1503 aa15.41■□□□□ 0.06
NCKIPSD-202ENST00000413374 NPHP4O75161 1426 aaPredicted RBP15.41■□□□□ 0.06
NCKIPSD-202ENST00000413374 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
NCKIPSD-202ENST00000413374 LTBP4Q8N2S1 1624 aa15.4■□□□□ 0.06
NCKIPSD-202ENST00000413374 VWDEQ8N2E2 1590 aa15.4■□□□□ 0.06
NCKIPSD-202ENST00000413374 SLC52A1Q9NWF4 448 aa15.39■□□□□ 0.05
NCKIPSD-202ENST00000413374 BCANQ96GW7 911 aa15.38■□□□□ 0.05
NCKIPSD-202ENST00000413374 NOS1P29475 1434 aa15.37■□□□□ 0.05
NCKIPSD-202ENST00000413374 UBAP1LF5GYI3 381 aa15.37■□□□□ 0.05
NCKIPSD-202ENST00000413374 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
NCKIPSD-202ENST00000413374 NEURL4Q96JN8 1562 aa15.36■□□□□ 0.05
NCKIPSD-202ENST00000413374 EFCAB6Q5THR3 1501 aa15.35■□□□□ 0.05
NCKIPSD-202ENST00000413374 NUTM2DQ5VT03 806 aaPredicted RBP15.35■□□□□ 0.05
NCKIPSD-202ENST00000413374 TMEM2Q9UHN6 1383 aa15.35■□□□□ 0.05
NCKIPSD-202ENST00000413374 SLC26A8Q96RN1 970 aa15.34■□□□□ 0.05
NCKIPSD-202ENST00000413374 MED14O60244 1454 aa15.33■□□□□ 0.05
NCKIPSD-202ENST00000413374 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.04
NCKIPSD-202ENST00000413374 SYNMO15061 1565 aa15.32■□□□□ 0.04
NCKIPSD-202ENST00000413374 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
NCKIPSD-202ENST00000413374 NAIPQ13075 1403 aa15.32■□□□□ 0.04
NCKIPSD-202ENST00000413374 PIK3C2BO00750 1634 aa15.32■□□□□ 0.04
NCKIPSD-202ENST00000413374 PPP1R15AO75807 674 aaPredicted RBP15.31■□□□□ 0.04
NCKIPSD-202ENST00000413374 PIP4K2BP78356 416 aa15.31■□□□□ 0.04
NCKIPSD-202ENST00000413374 ARHGAP23Q9P227 1491 aa15.31■□□□□ 0.04
NCKIPSD-202ENST00000413374 UBR1Q8IWV7 1749 aa15.31■□□□□ 0.04
NCKIPSD-202ENST00000413374 UNC13BO14795 1591 aa15.3■□□□□ 0.04
NCKIPSD-202ENST00000413374 RPRD2Q5VT52 1461 aaKnown RBP15.3■□□□□ 0.04
NCKIPSD-202ENST00000413374 SLIT1O75093 1534 aa15.29■□□□□ 0.04
NCKIPSD-202ENST00000413374 POLR1AO95602 1720 aaPredicted RBP15.29■□□□□ 0.04
NCKIPSD-202ENST00000413374 HDGFP51858 240 aaKnown RBP15.28■□□□□ 0.04
NCKIPSD-202ENST00000413374 RBM33Q96EV2 1170 aaKnown RBP15.28■□□□□ 0.04
NCKIPSD-202ENST00000413374 TET3O43151 1660 aa15.27■□□□□ 0.03
NCKIPSD-202ENST00000413374 TOM1O60784 492 aa15.26■□□□□ 0.03
NCKIPSD-202ENST00000413374 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-202ENST00000413374 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-202ENST00000413374 IQSEC2Q5JU85 1478 aa15.26■□□□□ 0.03
NCKIPSD-202ENST00000413374 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
NCKIPSD-202ENST00000413374 IQGAP1P46940 1657 aa15.25■□□□□ 0.03
NCKIPSD-202ENST00000413374 FOXD1Q16676 465 aa15.25■□□□□ 0.03
NCKIPSD-202ENST00000413374 HFM1A2PYH4 1435 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms