RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 HFM1A2PYH4 1435 aa19.04■□□□□ 0.64
ZNF3-204ENST00000412947 NAIPQ13075 1403 aa19.03■□□□□ 0.64
ZNF3-204ENST00000412947 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
ZNF3-204ENST00000412947 GCC2Q8IWJ2 1684 aa19.01■□□□□ 0.63
ZNF3-204ENST00000412947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.634e-11■□□□□ 11.1
ZNF3-204ENST00000412947 KANK1Q14678 1352 aa19.01■□□□□ 0.63
ZNF3-204ENST00000412947 RIMS1Q86UR5 1692 aaKnown RBP19.01■□□□□ 0.63
ZNF3-204ENST00000412947 WASHC2CQ9Y4E1 1318 aa19■□□□□ 0.63
ZNF3-204ENST00000412947 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
ZNF3-204ENST00000412947 KDM5DQ9BY66 1539 aa19■□□□□ 0.63
ZNF3-204ENST00000412947 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
ZNF3-204ENST00000412947 MROH1Q8NDA8 1641 aa18.99■□□□□ 0.63
ZNF3-204ENST00000412947 PRDM15P57071 1507 aaPredicted RBP18.99■□□□□ 0.63
ZNF3-204ENST00000412947 PTPRMP28827 1452 aa18.98■□□□□ 0.63
ZNF3-204ENST00000412947 TRIM26Q12899 539 aaPredicted RBP18.98■□□□□ 0.63
ZNF3-204ENST00000412947 CLTCQ00610 1675 aaKnown RBP18.96■□□□□ 0.63
ZNF3-204ENST00000412947 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
ZNF3-204ENST00000412947 UNC13BO14795 1591 aa18.95■□□□□ 0.62
ZNF3-204ENST00000412947 ZC3H13Q5T200 1668 aaKnown RBP18.95■□□□□ 0.62
ZNF3-204ENST00000412947 ABCC3O15438 1527 aa18.95■□□□□ 0.62
ZNF3-204ENST00000412947 SETD5Q9C0A6 1442 aa18.94■□□□□ 0.62
ZNF3-204ENST00000412947 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
ZNF3-204ENST00000412947 MROH2AA6NES4 1674 aa18.94■□□□□ 0.62
ZNF3-204ENST00000412947 ZMYM3Q14202 1370 aa18.93■□□□□ 0.62
ZNF3-204ENST00000412947 NUP155O75694 1391 aa18.92■□□□□ 0.62
ZNF3-204ENST00000412947 VWDEQ8N2E2 1590 aa18.91■□□□□ 0.62
ZNF3-204ENST00000412947 CEBPAP49715 358 aaPredicted RBP18.91■□□□□ 0.62
ZNF3-204ENST00000412947 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
ZNF3-204ENST00000412947 CEP152O94986 1710 aa18.9■□□□□ 0.62
ZNF3-204ENST00000412947 C3P01024 1663 aa18.89■□□□□ 0.61
ZNF3-204ENST00000412947 ACIN1Q9UKV3 1341 aaKnown RBP18.89■□□□□ 0.61
ZNF3-204ENST00000412947 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
ZNF3-204ENST00000412947 RAB3GAP2Q9H2M9 1393 aa18.88■□□□□ 0.61
ZNF3-204ENST00000412947 CAMSAP1Q5T5Y3 1602 aa18.88■□□□□ 0.61
ZNF3-204ENST00000412947 PZPP20742 1482 aa18.87■□□□□ 0.61
ZNF3-204ENST00000412947 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
ZNF3-204ENST00000412947 NPATQ14207 1427 aa18.84■□□□□ 0.61
ZNF3-204ENST00000412947 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
ZNF3-204ENST00000412947 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
ZNF3-204ENST00000412947 TET3O43151 1660 aa18.83■□□□□ 0.61
ZNF3-204ENST00000412947 FBXO31Q5XUX0 539 aaPredicted RBP18.82■□□□□ 0.6
ZNF3-204ENST00000412947 HRCP23327 699 aa18.81■□□□□ 0.6
ZNF3-204ENST00000412947 RPRD2Q5VT52 1461 aaKnown RBP18.8■□□□□ 0.6
ZNF3-204ENST00000412947 ERVK-7P63135 1459 aa18.79■□□□□ 0.6
ZNF3-204ENST00000412947 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
ZNF3-204ENST00000412947 TNRQ92752 1358 aa18.79■□□□□ 0.6
ZNF3-204ENST00000412947 SPATA31D1Q6ZQQ2 1576 aa18.77■□□□□ 0.6
ZNF3-204ENST00000412947 UHRF1BP1Q6BDS2 1440 aa18.76■□□□□ 0.59
ZNF3-204ENST00000412947 E9PCH4 1651 aa18.76■□□□□ 0.59
ZNF3-204ENST00000412947 PREX1Q8TCU6 1659 aa18.76■□□□□ 0.59
ZNF3-204ENST00000412947 MPHOSPH9Q99550 1183 aa18.75■□□□□ 0.59
ZNF3-204ENST00000412947 PKD2Q13563 968 aa18.74■□□□□ 0.59
ZNF3-204ENST00000412947 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
ZNF3-204ENST00000412947 SETD1BQ9UPS6 1966 aaKnown RBP18.73■□□□□ 0.59
ZNF3-204ENST00000412947 NOS1P29475 1434 aa18.73■□□□□ 0.59
ZNF3-204ENST00000412947 MYO3AQ8NEV4 1616 aa18.72■□□□□ 0.59
ZNF3-204ENST00000412947 NLRP1Q9C000 1473 aa18.71■□□□□ 0.59
ZNF3-204ENST00000412947 CFAP65Q6ZU64 1925 aaKnown RBP18.71■□□□□ 0.59
ZNF3-204ENST00000412947 LMTK3Q96Q04 1460 aa18.69■□□□□ 0.58
ZNF3-204ENST00000412947 SYNMO15061 1565 aa18.68■□□□□ 0.58
ZNF3-204ENST00000412947 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
ZNF3-204ENST00000412947 A2ML1A8K2U0 1454 aa18.68■□□□□ 0.58
ZNF3-204ENST00000412947 CEP170BQ9Y4F5 1589 aaPredicted RBP18.68■□□□□ 0.58
ZNF3-204ENST00000412947 PTPRTO14522 1441 aa18.66■□□□□ 0.58
ZNF3-204ENST00000412947 FOXD1Q16676 465 aa18.66■□□□□ 0.58
ZNF3-204ENST00000412947 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
ZNF3-204ENST00000412947 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
ZNF3-204ENST00000412947 IDI1Q13907 227 aa18.65■□□□□ 0.58
ZNF3-204ENST00000412947 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
ZNF3-204ENST00000412947 TRPM2O94759 1503 aa18.64■□□□□ 0.57
ZNF3-204ENST00000412947 HSPA2P54652 639 aa18.63■□□□□ 0.57
ZNF3-204ENST00000412947 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
ZNF3-204ENST00000412947 PLA2R1Q13018 1463 aa18.61■□□□□ 0.57
ZNF3-204ENST00000412947 THEMISQ8N1K5 641 aaPredicted RBP18.61■□□□□ 0.57
ZNF3-204ENST00000412947 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
ZNF3-204ENST00000412947 CHGAP10645 457 aaKnown RBP18.6■□□□□ 0.57
ZNF3-204ENST00000412947 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
ZNF3-204ENST00000412947 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
ZNF3-204ENST00000412947 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
ZNF3-204ENST00000412947 UBR1Q8IWV7 1749 aa18.57■□□□□ 0.56
ZNF3-204ENST00000412947 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
ZNF3-204ENST00000412947 ANKRD30BQ9BXX2 1392 aa18.55■□□□□ 0.56
ZNF3-204ENST00000412947 DHX57Q6P158 1386 aaKnown RBP18.54■□□□□ 0.56
ZNF3-204ENST00000412947 TMEM131LA2VDJ0 1609 aa18.53■□□□□ 0.56
ZNF3-204ENST00000412947 ANKLE2Q86XL3 938 aa18.52■□□□□ 0.56
ZNF3-204ENST00000412947 TMEM2Q9UHN6 1383 aa18.52■□□□□ 0.55
ZNF3-204ENST00000412947 ZNF326Q5BKZ1 582 aaKnown RBP18.51■□□□□ 0.55
ZNF3-204ENST00000412947 EID1Q9Y6B2 187 aa18.51■□□□□ 0.55
ZNF3-204ENST00000412947 SLIT1O75093 1534 aa18.5■□□□□ 0.55
ZNF3-204ENST00000412947 KIF1BO60333 1816 aa18.5■□□□□ 0.55
ZNF3-204ENST00000412947 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
ZNF3-204ENST00000412947 HDGFP51858 240 aaKnown RBP18.49■□□□□ 0.55
ZNF3-204ENST00000412947 TXNDC2Q86VQ3 553 aa18.49■□□□□ 0.55
ZNF3-204ENST00000412947 ARHGAP23Q9P227 1491 aa18.49■□□□□ 0.55
ZNF3-204ENST00000412947 RIMS2Q9UQ26 1411 aa18.48■□□□□ 0.55
ZNF3-204ENST00000412947 SCAF11Q99590 1463 aaKnown RBP18.47■□□□□ 0.55
ZNF3-204ENST00000412947 MYO5BQ9ULV0 1848 aa18.46■□□□□ 0.55
ZNF3-204ENST00000412947 PPP1R15AO75807 674 aaPredicted RBP18.46■□□□□ 0.55
ZNF3-204ENST00000412947 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.46■□□□□ 0.55
ZNF3-204ENST00000412947 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms