RNA–Protein interactions for RNA: ENST00000412543.5

UBAP2-206, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 1,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-206ENST00000412543 MEX3CQ5U5Q3 659 aaKnown RBP12.25□□□□□ -0.45
UBAP2-206ENST00000412543 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
UBAP2-206ENST00000412543 CDK11AQ9UQ88 783 aaPredicted RBP12.25□□□□□ -0.45
UBAP2-206ENST00000412543 TNRQ92752 1358 aa12.24□□□□□ -0.45
UBAP2-206ENST00000412543 JCADQ9P266 1359 aa12.24□□□□□ -0.45
UBAP2-206ENST00000412543 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
UBAP2-206ENST00000412543 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
UBAP2-206ENST00000412543 IFFO2Q5TF58 517 aa12.21□□□□□ -0.45
UBAP2-206ENST00000412543 CLTCQ00610 1675 aaKnown RBP12.21□□□□□ -0.45
UBAP2-206ENST00000412543 POLR1AO95602 1720 aaPredicted RBP12.2□□□□□ -0.46
UBAP2-206ENST00000412543 ABCC1P33527 1531 aa12.2□□□□□ -0.46
UBAP2-206ENST00000412543 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
UBAP2-206ENST00000412543 MYO5CQ9NQX4 1742 aa12.2□□□□□ -0.46
UBAP2-206ENST00000412543 CDK12Q9NYV4 1490 aaPredicted RBP12.19□□□□□ -0.46
UBAP2-206ENST00000412543 STRCP1A6NGW2 1772 aa12.19□□□□□ -0.46
UBAP2-206ENST00000412543 NUTM2BA6NNL0 878 aaPredicted RBP12.19□□□□□ -0.46
UBAP2-206ENST00000412543 NUTM2EB1AL46 878 aaPredicted RBP12.19□□□□□ -0.46
UBAP2-206ENST00000412543 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
UBAP2-206ENST00000412543 NUTM2AQ8IVF1 878 aaPredicted RBP12.19□□□□□ -0.46
UBAP2-206ENST00000412543 KIDINS220Q9ULH0 1771 aa12.19□□□□□ -0.46
UBAP2-206ENST00000412543 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
UBAP2-206ENST00000412543 SETBP1Q9Y6X0 1596 aa12.18□□□□□ -0.46
UBAP2-206ENST00000412543 FAM135AQ9P2D6 1515 aa12.17□□□□□ -0.46
UBAP2-206ENST00000412543 SYNMO15061 1565 aa12.17□□□□□ -0.46
UBAP2-206ENST00000412543 MIA2Q96PC5 1412 aa12.15□□□□□ -0.46
UBAP2-206ENST00000412543 DEPDC5O75140 1603 aa12.15□□□□□ -0.46
UBAP2-206ENST00000412543 TMEM94Q12767 1356 aa12.14□□□□□ -0.47
UBAP2-206ENST00000412543 LRP6O75581 1613 aa12.14□□□□□ -0.47
UBAP2-206ENST00000412543 A2MP01023 1474 aa12.14□□□□□ -0.47
UBAP2-206ENST00000412543 HNRNPMP52272 730 aaKnown RBP eCLIP12.13□□□□□ -0.475e-6■■■■□ 24.7
UBAP2-206ENST00000412543 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
UBAP2-206ENST00000412543 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
UBAP2-206ENST00000412543 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
UBAP2-206ENST00000412543 UGGT1Q9NYU2 1555 aa12.13□□□□□ -0.47
UBAP2-206ENST00000412543 RBM6P78332 1123 aaKnown RBP12.12□□□□□ -0.47
UBAP2-206ENST00000412543 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
UBAP2-206ENST00000412543 KDM5DQ9BY66 1539 aa12.12□□□□□ -0.47
UBAP2-206ENST00000412543 KIF14Q15058 1648 aa12.12□□□□□ -0.47
UBAP2-206ENST00000412543 QTRT2Q9H974 415 aaKnown RBP12.11□□□□□ -0.47
UBAP2-206ENST00000412543 NLRP1Q9C000 1473 aa12.11□□□□□ -0.47
UBAP2-206ENST00000412543 ROBO1Q9Y6N7 1651 aa12.11□□□□□ -0.47
UBAP2-206ENST00000412543 CLIP1P30622 1438 aa12.11□□□□□ -0.47
UBAP2-206ENST00000412543 PROSER2Q86WR7 435 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-206ENST00000412543 AFF2P51816 1311 aa12.1□□□□□ -0.47
UBAP2-206ENST00000412543 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
UBAP2-206ENST00000412543 RGS12O14924 1447 aa12.1□□□□□ -0.47
UBAP2-206ENST00000412543 ITSN2Q9NZM3 1697 aa12.09□□□□□ -0.47
UBAP2-206ENST00000412543 ATAD2Q6PL18 1390 aa12.09□□□□□ -0.47
UBAP2-206ENST00000412543 LTKP29376 864 aa12.09□□□□□ -0.47
UBAP2-206ENST00000412543 TXNDC2Q86VQ3 553 aa12.09□□□□□ -0.47
UBAP2-206ENST00000412543 WASHC2CQ9Y4E1 1318 aa12.08□□□□□ -0.48
UBAP2-206ENST00000412543 FGD6Q6ZV73 1430 aa12.08□□□□□ -0.48
UBAP2-206ENST00000412543 PZPP20742 1482 aa12.08□□□□□ -0.48
UBAP2-206ENST00000412543 LRRC9Q6ZRR7 1453 aa12.07□□□□□ -0.48
UBAP2-206ENST00000412543 KCNA6P17658 529 aa12.07□□□□□ -0.48
UBAP2-206ENST00000412543 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
UBAP2-206ENST00000412543 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
UBAP2-206ENST00000412543 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
UBAP2-206ENST00000412543 KIF3BO15066 747 aa12.05□□□□□ -0.48
UBAP2-206ENST00000412543 YY1P25490 414 aa12.05□□□□□ -0.48
UBAP2-206ENST00000412543 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
UBAP2-206ENST00000412543 XIRP1Q702N8 1843 aaKnown RBP12.05□□□□□ -0.48
UBAP2-206ENST00000412543 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
UBAP2-206ENST00000412543 PHLPP1O60346 1717 aa12.03□□□□□ -0.48
UBAP2-206ENST00000412543 MSH6P52701 1360 aa12.03□□□□□ -0.48
UBAP2-206ENST00000412543 SCAF11Q99590 1463 aaKnown RBP12.03□□□□□ -0.48
UBAP2-206ENST00000412543 EID1Q9Y6B2 187 aa12.02□□□□□ -0.49
UBAP2-206ENST00000412543 DHX29Q7Z478 1369 aaKnown RBP12□□□□□ -0.49
UBAP2-206ENST00000412543 C8orf37Q96NL8 207 aa12□□□□□ -0.49
UBAP2-206ENST00000412543 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
UBAP2-206ENST00000412543 EP400Q96L91 3159 aa11.99□□□□□ -0.49
UBAP2-206ENST00000412543 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
UBAP2-206ENST00000412543 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
UBAP2-206ENST00000412543 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
UBAP2-206ENST00000412543 KIAA1107Q9UPP5 1409 aa11.98□□□□□ -0.49
UBAP2-206ENST00000412543 PREX2Q70Z35 1606 aa11.98□□□□□ -0.49
UBAP2-206ENST00000412543 FMN1Q68DA7 1419 aa11.98□□□□□ -0.49
UBAP2-206ENST00000412543 SLC26A8Q96RN1 970 aa11.97□□□□□ -0.49
UBAP2-206ENST00000412543 CFDP1Q9UEE9 299 aaPredicted RBP11.96□□□□□ -0.49
UBAP2-206ENST00000412543 PRDM15P57071 1507 aaPredicted RBP11.94□□□□□ -0.5
UBAP2-206ENST00000412543 NCOA2Q15596 1464 aa11.94□□□□□ -0.5
UBAP2-206ENST00000412543 INO80Q9ULG1 1556 aaPredicted RBP11.93□□□□□ -0.5
UBAP2-206ENST00000412543 ARHGAP23Q9P227 1491 aa11.93□□□□□ -0.5
UBAP2-206ENST00000412543 HRCP23327 699 aa11.92□□□□□ -0.5
UBAP2-206ENST00000412543 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
UBAP2-206ENST00000412543 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
UBAP2-206ENST00000412543 LRP5O75197 1615 aa11.91□□□□□ -0.5
UBAP2-206ENST00000412543 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
UBAP2-206ENST00000412543 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
UBAP2-206ENST00000412543 SLIT1O75093 1534 aa11.91□□□□□ -0.5
UBAP2-206ENST00000412543 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
UBAP2-206ENST00000412543 SENP3-EIF4A1A0A087X0R7 540 aa11.9□□□□□ -0.5
UBAP2-206ENST00000412543 ZBTB22O15209 634 aa11.9□□□□□ -0.5
UBAP2-206ENST00000412543 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
UBAP2-206ENST00000412543 C14orf37Q86TY3 774 aa11.9□□□□□ -0.5
UBAP2-206ENST00000412543 TRPC5Q9UL62 973 aaPredicted RBP11.9□□□□□ -0.5
UBAP2-206ENST00000412543 RTEL1-TNFRSF6BF6WH68 1400 aa11.9□□□□□ -0.5
UBAP2-206ENST00000412543 SHPRHQ149N8 1683 aa11.9□□□□□ -0.51
UBAP2-206ENST00000412543 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
UBAP2-206ENST00000412543 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms