RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 PPP1R37O75864 691 aa9.56□□□□□ -0.88
RAB28P1-201ENST00000411517 MYT1LQ9UL68 1186 aa9.56□□□□□ -0.88
RAB28P1-201ENST00000411517 DNMBPQ6XZF7 1577 aa9.54□□□□□ -0.88
RAB28P1-201ENST00000411517 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
RAB28P1-201ENST00000411517 TSPOAP1O95153 1857 aa9.53□□□□□ -0.88
RAB28P1-201ENST00000411517 MAPKBP1O60336 1514 aa9.52□□□□□ -0.88
RAB28P1-201ENST00000411517 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
RAB28P1-201ENST00000411517 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
RAB28P1-201ENST00000411517 TOP2BQ02880 1626 aa9.49□□□□□ -0.89
RAB28P1-201ENST00000411517 WIZO95785 1651 aa9.49□□□□□ -0.89
RAB28P1-201ENST00000411517 LSM11P83369 360 aaKnown RBP eCLIP9.49□□□□□ -0.89
RAB28P1-201ENST00000411517 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
RAB28P1-201ENST00000411517 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
RAB28P1-201ENST00000411517 SLC34A2O95436 690 aa9.47□□□□□ -0.89
RAB28P1-201ENST00000411517 PTGER2P43116 358 aa9.47□□□□□ -0.89
RAB28P1-201ENST00000411517 HS6ST3Q8IZP7 471 aa9.47□□□□□ -0.89
RAB28P1-201ENST00000411517 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
RAB28P1-201ENST00000411517 TDRD9Q8NDG6 1382 aaKnown RBP9.47□□□□□ -0.89
RAB28P1-201ENST00000411517 CEP170Q5SW79 1584 aa9.46□□□□□ -0.89
RAB28P1-201ENST00000411517 GRIN2BQ13224 1484 aa9.45□□□□□ -0.9
RAB28P1-201ENST00000411517 PBX2P40425 430 aa9.44□□□□□ -0.9
RAB28P1-201ENST00000411517 PLPP6Q8IY26 295 aa9.43□□□□□ -0.9
RAB28P1-201ENST00000411517 SHROOM2Q13796 1616 aa9.42□□□□□ -0.9
RAB28P1-201ENST00000411517 CERKQ8TCT0 537 aa9.42□□□□□ -0.9
RAB28P1-201ENST00000411517 RAD54L2Q9Y4B4 1467 aa9.41□□□□□ -0.9
RAB28P1-201ENST00000411517 POTEEQ6S8J3 1075 aa9.4□□□□□ -0.9
RAB28P1-201ENST00000411517 FOXK1P85037 733 aa9.39□□□□□ -0.91
RAB28P1-201ENST00000411517 DSG2Q14126 1118 aa9.39□□□□□ -0.91
RAB28P1-201ENST00000411517 GPHNQ9NQX3 736 aaPredicted RBP9.39□□□□□ -0.91
RAB28P1-201ENST00000411517 SOGA1O94964 1423 aa9.39□□□□□ -0.91
RAB28P1-201ENST00000411517 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
RAB28P1-201ENST00000411517 PPRC1Q5VV67 1664 aaKnown RBP9.37□□□□□ -0.91
RAB28P1-201ENST00000411517 PBRM1Q86U86 1689 aa9.37□□□□□ -0.91
RAB28P1-201ENST00000411517 TBC1D12O60347 775 aa9.37□□□□□ -0.91
RAB28P1-201ENST00000411517 PTCD2Q8WV60 388 aaKnown RBP9.37□□□□□ -0.91
RAB28P1-201ENST00000411517 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
RAB28P1-201ENST00000411517 PCF11O94913 1555 aaKnown RBP9.36□□□□□ -0.91
RAB28P1-201ENST00000411517 NKX1-1Q15270 411 aaPredicted RBP9.35□□□□□ -0.91
RAB28P1-201ENST00000411517 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
RAB28P1-201ENST00000411517 UPF1Q92900 1129 aaKnown RBP eCLIP9.34□□□□□ -0.91
RAB28P1-201ENST00000411517 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
RAB28P1-201ENST00000411517 ADCY10Q96PN6 1610 aa9.34□□□□□ -0.91
RAB28P1-201ENST00000411517 NUP160Q12769 1436 aa9.33□□□□□ -0.92
RAB28P1-201ENST00000411517 PSEN2P49810 448 aa9.33□□□□□ -0.92
RAB28P1-201ENST00000411517 PPP4R3BQ5MIZ7 849 aa9.33□□□□□ -0.92
RAB28P1-201ENST00000411517 RYDENQ9NUL5 291 aaKnown RBP9.33□□□□□ -0.92
RAB28P1-201ENST00000411517 GRIN2AQ12879 1464 aa9.33□□□□□ -0.92
RAB28P1-201ENST00000411517 COL17A1Q9UMD9 1497 aaPredicted RBP9.32□□□□□ -0.92
RAB28P1-201ENST00000411517 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
RAB28P1-201ENST00000411517 KCNH8Q96L42 1107 aa9.29□□□□□ -0.92
RAB28P1-201ENST00000411517 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
RAB28P1-201ENST00000411517 KCNK17Q96T54 332 aa9.29□□□□□ -0.92
RAB28P1-201ENST00000411517 GLI2P10070 1586 aa9.29□□□□□ -0.92
RAB28P1-201ENST00000411517 FGD5Q6ZNL6 1462 aa9.28□□□□□ -0.92
RAB28P1-201ENST00000411517 PPP1R15BQ5SWA1 713 aa9.28□□□□□ -0.92
RAB28P1-201ENST00000411517 PRG4Q92954 1404 aaPredicted RBP9.28□□□□□ -0.92
RAB28P1-201ENST00000411517 PTPRMP28827 1452 aa9.28□□□□□ -0.92
RAB28P1-201ENST00000411517 TK2O00142 265 aa9.26□□□□□ -0.93
RAB28P1-201ENST00000411517 ZNF454Q8N9F8 522 aa9.26□□□□□ -0.93
RAB28P1-201ENST00000411517 OXER1Q8TDS5 423 aa9.26□□□□□ -0.93
RAB28P1-201ENST00000411517 CRISPLD2Q9H0B8 497 aa9.26□□□□□ -0.93
RAB28P1-201ENST00000411517 HCSTQ9UBK5 93 aa9.26□□□□□ -0.93
RAB28P1-201ENST00000411517 TEX14Q8IWB6 1497 aa9.25□□□□□ -0.93
RAB28P1-201ENST00000411517 KCTD12Q96CX2 325 aaKnown RBP9.24□□□□□ -0.93
RAB28P1-201ENST00000411517 PLA2G2EQ9NZK7 142 aa9.24□□□□□ -0.93
RAB28P1-201ENST00000411517 KIF21BO75037 1637 aa9.23□□□□□ -0.93
RAB28P1-201ENST00000411517 PDE4AP27815 886 aa9.23□□□□□ -0.93
RAB28P1-201ENST00000411517 ADAMTS12P58397 1594 aa9.23□□□□□ -0.93
RAB28P1-201ENST00000411517 ABCA5Q8WWZ7 1642 aa9.23□□□□□ -0.93
RAB28P1-201ENST00000411517 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
RAB28P1-201ENST00000411517 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
RAB28P1-201ENST00000411517 HRO43593 1189 aa9.21□□□□□ -0.94
RAB28P1-201ENST00000411517 LARP6Q9BRS8 491 aaKnown RBP9.21□□□□□ -0.94
RAB28P1-201ENST00000411517 MAP3K4Q9Y6R4 1608 aa9.2□□□□□ -0.94
RAB28P1-201ENST00000411517 GTPBP6O43824 516 aaPredicted RBP9.2□□□□□ -0.94
RAB28P1-201ENST00000411517 CCDC88BA6NC98 1476 aa9.2□□□□□ -0.94
RAB28P1-201ENST00000411517 PLB1Q6P1J6 1458 aa9.19□□□□□ -0.94
RAB28P1-201ENST00000411517 DDX27Q96GQ7 796 aaKnown RBP9.18□□□□□ -0.94
RAB28P1-201ENST00000411517 KIAA0586Q9BVV6 1533 aa9.17□□□□□ -0.94
RAB28P1-201ENST00000411517 EVI5O60447 810 aa9.17□□□□□ -0.94
RAB28P1-201ENST00000411517 JPH4Q96JJ6 628 aa9.17□□□□□ -0.94
RAB28P1-201ENST00000411517 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
RAB28P1-201ENST00000411517 ASXL2Q76L83 1435 aa9.16□□□□□ -0.94
RAB28P1-201ENST00000411517 PTPREP23469 700 aa9.16□□□□□ -0.94
RAB28P1-201ENST00000411517 FOSBP53539 338 aa9.16□□□□□ -0.94
RAB28P1-201ENST00000411517 HSPA2P54652 639 aa9.16□□□□□ -0.94
RAB28P1-201ENST00000411517 PTPN5P54829 565 aa9.16□□□□□ -0.94
RAB28P1-201ENST00000411517 BCL2L12Q9HB09 334 aa9.16□□□□□ -0.94
RAB28P1-201ENST00000411517 MAP3K9P80192 1104 aa9.15□□□□□ -0.94
RAB28P1-201ENST00000411517 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.95
RAB28P1-201ENST00000411517 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
RAB28P1-201ENST00000411517 MED1Q15648 1581 aaPredicted RBP9.13□□□□□ -0.95
RAB28P1-201ENST00000411517 GOLGA8CPA6NN73 597 aa9.13□□□□□ -0.95
RAB28P1-201ENST00000411517 ABCC2Q92887 1545 aa9.13□□□□□ -0.95
RAB28P1-201ENST00000411517 IQSEC2Q5JU85 1478 aa9.13□□□□□ -0.95
RAB28P1-201ENST00000411517 MADDQ8WXG6 1647 aa9.13□□□□□ -0.95
RAB28P1-201ENST00000411517 CUX1P39880 1505 aa9.12□□□□□ -0.95
RAB28P1-201ENST00000411517 RUSC2Q8N2Y8 1516 aa9.12□□□□□ -0.95
RAB28P1-201ENST00000411517 ZDHHC16Q969W1 377 aa9.12□□□□□ -0.95
RAB28P1-201ENST00000411517 EPRSP07814 1512 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms