RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 KANK3Q6NY19 840 aa2.62□□□□□ -1.99
RNU4-88P-201ENST00000411220 TXKP42681 527 aa2.61□□□□□ -1.99
RNU4-88P-201ENST00000411220 ILDR1Q86SU0 546 aaPredicted RBP2.6□□□□□ -1.99
RNU4-88P-201ENST00000411220 MRPL50Q8N5N7 158 aaKnown RBP2.6□□□□□ -1.99
RNU4-88P-201ENST00000411220 NXF1Q9UBU9 619 aaKnown RBP2.6□□□□□ -1.99
RNU4-88P-201ENST00000411220 ADAMTS8Q9UP79 889 aa2.6□□□□□ -1.99
RNU4-88P-201ENST00000411220 BHMG1C9JSJ3 638 aaPredicted RBP2.59□□□□□ -1.99
RNU4-88P-201ENST00000411220 AXIN1O15169 862 aa2.59□□□□□ -1.99
RNU4-88P-201ENST00000411220 NPAS3Q8IXF0 933 aa2.59□□□□□ -1.99
RNU4-88P-201ENST00000411220 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.59□□□□□ -1.99
RNU4-88P-201ENST00000411220 PROCP04070 461 aa2.58□□□□□ -2
RNU4-88P-201ENST00000411220 PLA2G4EQ3MJ16 856 aa2.58□□□□□ -2
RNU4-88P-201ENST00000411220 LCE4AQ5TA78 99 aa2.58□□□□□ -2
RNU4-88P-201ENST00000411220 KCNH8Q96L42 1107 aa2.57□□□□□ -2
RNU4-88P-201ENST00000411220 TMEM92Q6UXU6 159 aa2.56□□□□□ -2
RNU4-88P-201ENST00000411220 TRIM47Q96LD4 638 aa2.56□□□□□ -2
RNU4-88P-201ENST00000411220 ERBB4Q15303 1308 aa2.56□□□□□ -2
RNU4-88P-201ENST00000411220 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
RNU4-88P-201ENST00000411220 SENP2Q9HC62 589 aa2.55□□□□□ -2
RNU4-88P-201ENST00000411220 CTC1Q2NKJ3 1217 aa2.54□□□□□ -2
RNU4-88P-201ENST00000411220 ANKK1Q8NFD2 765 aa2.54□□□□□ -2
RNU4-88P-201ENST00000411220 H3BM21 787 aa2.53□□□□□ -2
RNU4-88P-201ENST00000411220 ZMYM1Q5SVZ6 1142 aa2.53□□□□□ -2
RNU4-88P-201ENST00000411220 AVPP01185 164 aa2.52□□□□□ -2.01
RNU4-88P-201ENST00000411220 KCNK17Q96T54 332 aa2.52□□□□□ -2.01
RNU4-88P-201ENST00000411220 SLC4A5Q9BY07 1137 aa2.52□□□□□ -2.01
RNU4-88P-201ENST00000411220 SCO2A0A1W2PP80 73 aa2.51□□□□□ -2.01
RNU4-88P-201ENST00000411220 TNFRSF10AO00220 468 aa2.51□□□□□ -2.01
RNU4-88P-201ENST00000411220 FURINP09958 794 aa2.51□□□□□ -2.01
RNU4-88P-201ENST00000411220 NBPF11Q86T75 865 aa2.51□□□□□ -2.01
RNU4-88P-201ENST00000411220 PAX4O43316 350 aa2.5□□□□□ -2.01
RNU4-88P-201ENST00000411220 PSPNO60542 156 aa2.5□□□□□ -2.01
RNU4-88P-201ENST00000411220 ITGB2P05107 769 aa2.5□□□□□ -2.01
RNU4-88P-201ENST00000411220 BAG6P46379 1132 aa2.5□□□□□ -2.01
RNU4-88P-201ENST00000411220 BCAMP50895 628 aa2.5□□□□□ -2.01
RNU4-88P-201ENST00000411220 NBPF3Q9H094 633 aa2.5□□□□□ -2.01
RNU4-88P-201ENST00000411220 VEGFBP49765 207 aa2.49□□□□□ -2.01
RNU4-88P-201ENST00000411220 SMCPP49901 116 aaPredicted RBP2.49□□□□□ -2.01
RNU4-88P-201ENST00000411220 ZNF598Q86UK7 904 aaKnown RBP2.49□□□□□ -2.01
RNU4-88P-201ENST00000411220 WDR26Q9H7D7 661 aa2.49□□□□□ -2.01
RNU4-88P-201ENST00000411220 GDF9O60383 454 aa2.48□□□□□ -2.01
RNU4-88P-201ENST00000411220 SLC19A1P41440 591 aa2.48□□□□□ -2.01
RNU4-88P-201ENST00000411220 KIFC2Q96AC6 838 aa2.48□□□□□ -2.01
RNU4-88P-201ENST00000411220 ATP13A2Q9NQ11 1180 aa2.48□□□□□ -2.01
RNU4-88P-201ENST00000411220 SPRYD7Q5W111 196 aa2.47□□□□□ -2.01
RNU4-88P-201ENST00000411220 SOWAHBA6NEL2 793 aa2.46□□□□□ -2.02
RNU4-88P-201ENST00000411220 COL9A1P20849 921 aa2.46□□□□□ -2.02
RNU4-88P-201ENST00000411220 GGCXP38435 758 aa2.46□□□□□ -2.02
RNU4-88P-201ENST00000411220 FMNL2Q96PY5 1086 aa2.46□□□□□ -2.02
RNU4-88P-201ENST00000411220 ZFP64Q9NPA5 681 aa2.46□□□□□ -2.02
RNU4-88P-201ENST00000411220 PPP4R3BQ5MIZ7 849 aa2.45□□□□□ -2.02
RNU4-88P-201ENST00000411220 SCARF2Q96GP6 870 aaPredicted RBP2.45□□□□□ -2.02
RNU4-88P-201ENST00000411220 MCTP1Q6DN14 999 aa2.44□□□□□ -2.02
RNU4-88P-201ENST00000411220 PCDHGA4Q9Y5G9 962 aa2.44□□□□□ -2.02
RNU4-88P-201ENST00000411220 MARSP56192 900 aaKnown RBP2.43□□□□□ -2.02
RNU4-88P-201ENST00000411220 JAG1P78504 1218 aa2.43□□□□□ -2.02
RNU4-88P-201ENST00000411220 TJAP1Q5JTD0 557 aa2.43□□□□□ -2.02
RNU4-88P-201ENST00000411220 ZNF697Q5TEC3 545 aa2.43□□□□□ -2.02
RNU4-88P-201ENST00000411220 DCAF5Q96JK2 942 aa2.43□□□□□ -2.02
RNU4-88P-201ENST00000411220 PCDHB8Q9UN66 801 aa2.43□□□□□ -2.02
RNU4-88P-201ENST00000411220 ARTNQ5T4W7 220 aa2.42□□□□□ -2.02
RNU4-88P-201ENST00000411220 TMUB1Q9BVT8 246 aa2.41□□□□□ -2.02
RNU4-88P-201ENST00000411220 VSIG8P0DPA2 414 aa2.4□□□□□ -2.03
RNU4-88P-201ENST00000411220 ATXN8OSP0DMR3 200 aa2.39□□□□□ -2.03
RNU4-88P-201ENST00000411220 ITGB7P26010 798 aa2.39□□□□□ -2.03
RNU4-88P-201ENST00000411220 MICALL2Q8IY33 904 aa2.39□□□□□ -2.03
RNU4-88P-201ENST00000411220 EMID1Q96A84 441 aaPredicted RBP2.38□□□□□ -2.03
RNU4-88P-201ENST00000411220 IL21Q9HBE4 155 aa2.38□□□□□ -2.03
RNU4-88P-201ENST00000411220 ZBED2Q9BTP6 218 aa2.36□□□□□ -2.03
RNU4-88P-201ENST00000411220 AVENQ9NQS1 362 aaPredicted RBP2.36□□□□□ -2.03
RNU4-88P-201ENST00000411220 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
RNU4-88P-201ENST00000411220 SVOPQ8N4V2 548 aa2.35□□□□□ -2.03
RNU4-88P-201ENST00000411220 TSR3Q9UJK0 312 aaKnown RBP2.35□□□□□ -2.03
RNU4-88P-201ENST00000411220 SLC34A2O95436 690 aa2.34□□□□□ -2.03
RNU4-88P-201ENST00000411220 LMOD2Q6P5Q4 547 aa2.34□□□□□ -2.03
RNU4-88P-201ENST00000411220 MTRQ99707 1265 aa2.34□□□□□ -2.03
RNU4-88P-201ENST00000411220 KRTAP9-3Q9BYQ3 159 aa2.34□□□□□ -2.03
RNU4-88P-201ENST00000411220 KRTAP9-7A8MTY7 169 aa2.33□□□□□ -2.04
RNU4-88P-201ENST00000411220 ZNF385CQ66K41 422 aaPredicted RBP2.33□□□□□ -2.04
RNU4-88P-201ENST00000411220 PLEKHG5O94827 1062 aa2.32□□□□□ -2.04
RNU4-88P-201ENST00000411220 ARHGEF15O94989 841 aa2.31□□□□□ -2.04
RNU4-88P-201ENST00000411220 FOXD4L6Q3SYB3 417 aaPredicted RBP2.31□□□□□ -2.04
RNU4-88P-201ENST00000411220 FOXD4L3Q6VB84 417 aaPredicted RBP2.31□□□□□ -2.04
RNU4-88P-201ENST00000411220 ZNF516Q92618 1163 aa2.31□□□□□ -2.04
RNU4-88P-201ENST00000411220 FAM212AQ96EL1 285 aa2.31□□□□□ -2.04
RNU4-88P-201ENST00000411220 FOXD4L1Q9NU39 408 aa2.31□□□□□ -2.04
RNU4-88P-201ENST00000411220 HPS5Q9UPZ3 1129 aa2.31□□□□□ -2.04
RNU4-88P-201ENST00000411220 COL17A1Q9UMD9 1497 aaPredicted RBP2.31□□□□□ -2.04
RNU4-88P-201ENST00000411220 KDM4FA0A1W2PPD8 638 aa2.3□□□□□ -2.04
RNU4-88P-201ENST00000411220 NKX2-3Q8TAU0 364 aa2.3□□□□□ -2.04
RNU4-88P-201ENST00000411220 SEMA6BQ9H3T3 888 aa2.3□□□□□ -2.04
RNU4-88P-201ENST00000411220 TOR4AQ9NXH8 423 aa2.3□□□□□ -2.04
RNU4-88P-201ENST00000411220 FOXC1Q12948 553 aa2.29□□□□□ -2.04
RNU4-88P-201ENST00000411220 LAPTM4BQ86VI4 370 aa2.29□□□□□ -2.04
RNU4-88P-201ENST00000411220 ZFRQ96KR1 1074 aaKnown RBP2.29□□□□□ -2.04
RNU4-88P-201ENST00000411220 PKD2L1Q9P0L9 805 aa2.29□□□□□ -2.04
RNU4-88P-201ENST00000411220 PHF20L1A8MW92 1017 aa2.28□□□□□ -2.04
RNU4-88P-201ENST00000411220 LIAT1Q6ZQX7 453 aa2.28□□□□□ -2.04
RNU4-88P-201ENST00000411220 PYGBP11216 843 aa2.27□□□□□ -2.05
RNU4-88P-201ENST00000411220 COL9A3Q14050 684 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms