RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 ZC3H15Q8WU90 426 aaKnown RBP6.96□□□□□ -1.3
RNU4-78P-201ENST00000410940 SLC4A5Q9BY07 1137 aa6.96□□□□□ -1.3
RNU4-78P-201ENST00000410940 GOLGA8CPA6NN73 597 aa6.95□□□□□ -1.3
RNU4-78P-201ENST00000410940 TRAF7Q6Q0C0 670 aa6.94□□□□□ -1.3
RNU4-78P-201ENST00000410940 ITGBL1O95965 494 aaPredicted RBP6.93□□□□□ -1.3
RNU4-78P-201ENST00000410940 E2F4Q16254 413 aa6.93□□□□□ -1.3
RNU4-78P-201ENST00000410940 LAPTM4AQ15012 233 aa6.92□□□□□ -1.3
RNU4-78P-201ENST00000410940 MRPL50Q8N5N7 158 aaKnown RBP6.92□□□□□ -1.3
RNU4-78P-201ENST00000410940 TESPA1A2RU30 521 aaPredicted RBP6.91□□□□□ -1.3
RNU4-78P-201ENST00000410940 TBC1D12O60347 775 aa6.91□□□□□ -1.3
RNU4-78P-201ENST00000410940 RANGAP1P46060 587 aaPredicted RBP6.91□□□□□ -1.3
RNU4-78P-201ENST00000410940 PLPP6Q8IY26 295 aa6.9□□□□□ -1.3
RNU4-78P-201ENST00000410940 BCL2L12Q9HB09 334 aa6.9□□□□□ -1.3
RNU4-78P-201ENST00000410940 ZMYND10O75800 440 aa6.89□□□□□ -1.31
RNU4-78P-201ENST00000410940 FOXK1P85037 733 aa6.89□□□□□ -1.31
RNU4-78P-201ENST00000410940 ZBED2Q9BTP6 218 aa6.88□□□□□ -1.31
RNU4-78P-201ENST00000410940 SLC24A3Q9HC58 644 aa6.88□□□□□ -1.31
RNU4-78P-201ENST00000410940 SUPT5HO00267 1087 aaKnown RBP6.87□□□□□ -1.31
RNU4-78P-201ENST00000410940 GFRA3O60609 400 aa6.87□□□□□ -1.31
RNU4-78P-201ENST00000410940 CADPS2Q86UW7 1296 aa6.87□□□□□ -1.31
RNU4-78P-201ENST00000410940 ARIH1Q9Y4X5 557 aaPredicted RBP6.87□□□□□ -1.31
RNU4-78P-201ENST00000410940 ZNF454Q8N9F8 522 aa6.86□□□□□ -1.31
RNU4-78P-201ENST00000410940 ZMYND15Q9H091 742 aa6.86□□□□□ -1.31
RNU4-78P-201ENST00000410940 NBPF3Q9H094 633 aa6.86□□□□□ -1.31
RNU4-78P-201ENST00000410940 PPP1R37O75864 691 aa6.85□□□□□ -1.31
RNU4-78P-201ENST00000410940 PTPREP23469 700 aa6.85□□□□□ -1.31
RNU4-78P-201ENST00000410940 BARGINQ6ZT62 677 aa6.85□□□□□ -1.31
RNU4-78P-201ENST00000410940 RSPH6AQ9H0K4 717 aa6.85□□□□□ -1.31
RNU4-78P-201ENST00000410940 AK7Q96M32 723 aa6.84□□□□□ -1.31
RNU4-78P-201ENST00000410940 PODXL2Q9NZ53 605 aa6.84□□□□□ -1.31
RNU4-78P-201ENST00000410940 DSG2Q14126 1118 aa6.83□□□□□ -1.32
RNU4-78P-201ENST00000410940 GPHNQ9NQX3 736 aaPredicted RBP6.83□□□□□ -1.32
RNU4-78P-201ENST00000410940 SEMA3EO15041 775 aa6.82□□□□□ -1.32
RNU4-78P-201ENST00000410940 PDE4AP27815 886 aa6.82□□□□□ -1.32
RNU4-78P-201ENST00000410940 KCNC4Q03721 635 aa6.82□□□□□ -1.32
RNU4-78P-201ENST00000410940 ANKK1Q8NFD2 765 aa6.81□□□□□ -1.32
RNU4-78P-201ENST00000410940 FOSBP53539 338 aa6.8□□□□□ -1.32
RNU4-78P-201ENST00000410940 ZNF787Q6DD87 383 aa6.8□□□□□ -1.32
RNU4-78P-201ENST00000410940 ZNF775Q96BV0 537 aaPredicted RBP6.8□□□□□ -1.32
RNU4-78P-201ENST00000410940 BCAMP50895 628 aa6.79□□□□□ -1.32
RNU4-78P-201ENST00000410940 NYAP1Q6ZVC0 841 aa6.79□□□□□ -1.32
RNU4-78P-201ENST00000410940 OXER1Q8TDS5 423 aa6.79□□□□□ -1.32
RNU4-78P-201ENST00000410940 NRG2O14511 850 aaPredicted RBP6.78□□□□□ -1.32
RNU4-78P-201ENST00000410940 UPF1Q92900 1129 aaKnown RBP eCLIP6.77□□□□□ -1.33
RNU4-78P-201ENST00000410940 SOWAHBA6NEL2 793 aa6.76□□□□□ -1.33
RNU4-78P-201ENST00000410940 MFSD10Q14728 455 aa6.76□□□□□ -1.33
RNU4-78P-201ENST00000410940 KRI1Q8N9T8 703 aaKnown RBP6.76□□□□□ -1.33
RNU4-78P-201ENST00000410940 ADAM33Q9BZ11 813 aa6.76□□□□□ -1.33
RNU4-78P-201ENST00000410940 WBP1LQ9NX94 342 aa6.76□□□□□ -1.33
RNU4-78P-201ENST00000410940 RABGEF1Q9UJ41 708 aa6.76□□□□□ -1.33
RNU4-78P-201ENST00000410940 ZDHHC16Q969W1 377 aa6.74□□□□□ -1.33
RNU4-78P-201ENST00000410940 JPH4Q96JJ6 628 aa6.74□□□□□ -1.33
RNU4-78P-201ENST00000410940 FLIIQ13045 1269 aa6.73□□□□□ -1.33
RNU4-78P-201ENST00000410940 CAMK2BQ13554 666 aa6.73□□□□□ -1.33
RNU4-78P-201ENST00000410940 GPIHBP1Q8IV16 184 aa6.73□□□□□ -1.33
RNU4-78P-201ENST00000410940 LARP6Q9BRS8 491 aaKnown RBP6.73□□□□□ -1.33
RNU4-78P-201ENST00000410940 PROX2Q3B8N5 592 aa6.72□□□□□ -1.33
RNU4-78P-201ENST00000410940 LAPTM4BQ86VI4 370 aa6.72□□□□□ -1.33
RNU4-78P-201ENST00000410940 DDX27Q96GQ7 796 aaKnown RBP6.72□□□□□ -1.33
RNU4-78P-201ENST00000410940 ZFRQ96KR1 1074 aaKnown RBP6.72□□□□□ -1.33
RNU4-78P-201ENST00000410940 PRKD2Q9BZL6 878 aa6.72□□□□□ -1.33
RNU4-78P-201ENST00000410940 KDM4CQ9H3R0 1056 aa6.72□□□□□ -1.33
RNU4-78P-201ENST00000410940 ANO8Q9HCE9 1232 aaPredicted RBP6.72□□□□□ -1.33
RNU4-78P-201ENST00000410940 PPP1R3GB7ZBB8 358 aa6.71□□□□□ -1.34
RNU4-78P-201ENST00000410940 UBTFP17480 764 aaKnown RBP6.71□□□□□ -1.34
RNU4-78P-201ENST00000410940 IL27Q8NEV9 243 aa6.71□□□□□ -1.34
RNU4-78P-201ENST00000410940 DDRGK1Q96HY6 314 aa6.7□□□□□ -1.34
RNU4-78P-201ENST00000410940 SPDYE16A6NNV3 312 aaPredicted RBP6.69□□□□□ -1.34
RNU4-78P-201ENST00000410940 PDE4DQ08499 809 aa6.69□□□□□ -1.34
RNU4-78P-201ENST00000410940 CRISPLD2Q9H0B8 497 aa6.69□□□□□ -1.34
RNU4-78P-201ENST00000410940 NCKAP5LQ9HCH0 1330 aa6.69□□□□□ -1.34
RNU4-78P-201ENST00000410940 TRIM66O15016 1216 aa6.68□□□□□ -1.34
RNU4-78P-201ENST00000410940 V9GY48 417 aaPredicted RBP6.68□□□□□ -1.34
RNU4-78P-201ENST00000410940 EVI5O60447 810 aa6.67□□□□□ -1.34
RNU4-78P-201ENST00000410940 GOPCQ9HD26 462 aa6.67□□□□□ -1.34
RNU4-78P-201ENST00000410940 COL9A1P20849 921 aa6.66□□□□□ -1.34
RNU4-78P-201ENST00000410940 TRIM26Q12899 539 aaPredicted RBP6.66□□□□□ -1.34
RNU4-78P-201ENST00000410940 GPBP1L1Q9HC44 474 aaPredicted RBP6.66□□□□□ -1.34
RNU4-78P-201ENST00000410940 KIAA1468Q9P260 1216 aa6.66□□□□□ -1.34
RNU4-78P-201ENST00000410940 TSR3Q9UJK0 312 aaKnown RBP6.66□□□□□ -1.34
RNU4-78P-201ENST00000410940 PDZRN3Q9UPQ7 1066 aa6.66□□□□□ -1.34
RNU4-78P-201ENST00000410940 ZBTB7CA1YPR0 619 aa6.65□□□□□ -1.34
RNU4-78P-201ENST00000410940 NPM2Q86SE8 214 aaKnown RBP6.65□□□□□ -1.34
RNU4-78P-201ENST00000410940 HPS5Q9UPZ3 1129 aa6.65□□□□□ -1.34
RNU4-78P-201ENST00000410940 MINK1Q8N4C8 1332 aaPredicted RBP6.65□□□□□ -1.35
RNU4-78P-201ENST00000410940 PDIA4P13667 645 aaKnown RBP6.64□□□□□ -1.35
RNU4-78P-201ENST00000410940 PPP1R15BQ5SWA1 713 aa6.63□□□□□ -1.35
RNU4-78P-201ENST00000410940 RBM26Q5T8P6 1007 aaKnown RBP6.63□□□□□ -1.35
RNU4-78P-201ENST00000410940 PPP1R18Q6NYC8 613 aa6.63□□□□□ -1.35
RNU4-78P-201ENST00000410940 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.63□□□□□ -1.35
RNU4-78P-201ENST00000410940 SEPT9Q9UHD8 586 aaPredicted RBP6.63□□□□□ -1.35
RNU4-78P-201ENST00000410940 CCDC9Q9Y3X0 531 aaKnown RBP6.63□□□□□ -1.35
RNU4-78P-201ENST00000410940 ONECUT3O60422 494 aaPredicted RBP6.62□□□□□ -1.35
RNU4-78P-201ENST00000410940 TJAP1Q5JTD0 557 aa6.62□□□□□ -1.35
RNU4-78P-201ENST00000410940 LRCH3Q96II8 777 aa6.62□□□□□ -1.35
RNU4-78P-201ENST00000410940 A6NJR5 290 aa6.61□□□□□ -1.35
RNU4-78P-201ENST00000410940 PCDHGA10Q9Y5H3 936 aa6.61□□□□□ -1.35
RNU4-78P-201ENST00000410940 HRCP23327 699 aa6.6□□□□□ -1.35
RNU4-78P-201ENST00000410940 FAM98CQ17RN3 349 aaKnown RBP6.6□□□□□ -1.35
RNU4-78P-201ENST00000410940 APBB1O00213 710 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms