RNA–Protein interactions for RNA: ENST00000410662.1

RN7SKP235-201, Transcript of RNA, 7SK small nuclear pseudogene 235, humanhuman

BASIC

Gene RN7SKP235, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP235-201ENST00000410662 SCUBE2Q9NQ36 999 aa7.65□□□□□ -1.18
RN7SKP235-201ENST00000410662 FCHSD2O94868 740 aa7.64□□□□□ -1.19
RN7SKP235-201ENST00000410662 SLAIN1Q8ND83 568 aa7.64□□□□□ -1.19
RN7SKP235-201ENST00000410662 ZSWIM6Q9HCJ5 1215 aa7.64□□□□□ -1.19
RN7SKP235-201ENST00000410662 MINK1Q8N4C8 1332 aaPredicted RBP7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 GNPATO15228 680 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 EN1Q05925 392 aaPredicted RBP7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 MAP2K5Q13163 448 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 PTGDRQ13258 359 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 NEUROD2Q15784 382 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 LAMC3Q9Y6N6 1575 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 RIMBP2O15034 1052 aa7.62□□□□□ -1.19
RN7SKP235-201ENST00000410662 HOXB3P14651 431 aaPredicted RBP7.62□□□□□ -1.19
RN7SKP235-201ENST00000410662 JPH4Q96JJ6 628 aa7.62□□□□□ -1.19
RN7SKP235-201ENST00000410662 PCDHGA10Q9Y5H3 936 aa7.62□□□□□ -1.19
RN7SKP235-201ENST00000410662 CADPSQ9ULU8 1353 aa7.61□□□□□ -1.19
RN7SKP235-201ENST00000410662 TYW1BQ6NUM6 668 aa7.61□□□□□ -1.19
RN7SKP235-201ENST00000410662 FBXW7Q969H0 707 aa7.61□□□□□ -1.19
RN7SKP235-201ENST00000410662 PRDM2Q13029 1718 aa7.61□□□□□ -1.19
RN7SKP235-201ENST00000410662 TRIM66O15016 1216 aa7.6□□□□□ -1.19
RN7SKP235-201ENST00000410662 IRF6O14896 467 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 FOSBP53539 338 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 GPR153Q6NV75 609 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 CFTRP13569 1480 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 KIF21AQ7Z4S6 1674 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 MAP3K7O43318 606 aa7.58□□□□□ -1.2
RN7SKP235-201ENST00000410662 ARSIQ5FYB1 569 aa7.58□□□□□ -1.2
RN7SKP235-201ENST00000410662 CCDC102AQ96A19 550 aa7.58□□□□□ -1.2
RN7SKP235-201ENST00000410662 NPDC1Q9NQX5 325 aaPredicted RBP7.58□□□□□ -1.2
RN7SKP235-201ENST00000410662 NUDT7P0C024 238 aa7.57□□□□□ -1.2
RN7SKP235-201ENST00000410662 FECHP22830 423 aa7.57□□□□□ -1.2
RN7SKP235-201ENST00000410662 PDE4DQ08499 809 aa7.57□□□□□ -1.2
RN7SKP235-201ENST00000410662 CDHR5Q9HBB8 845 aa7.57□□□□□ -1.2
RN7SKP235-201ENST00000410662 AMHR2Q16671 573 aa7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 TSR1Q2NL82 804 aaKnown RBP7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 ZNF710Q8N1W2 664 aa7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 KHSRPQ92945 711 aaKnown RBP eCLIP7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 ZDHHC16Q969W1 377 aa7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 RBM33Q96EV2 1170 aaKnown RBP7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 PDS5BQ9NTI5 1447 aa7.55□□□□□ -1.2
RN7SKP235-201ENST00000410662 SNPHO15079 494 aa7.55□□□□□ -1.2
RN7SKP235-201ENST00000410662 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
RN7SKP235-201ENST00000410662 DAXXQ9UER7 740 aaPredicted RBP7.55□□□□□ -1.2
RN7SKP235-201ENST00000410662 CERKQ8TCT0 537 aa7.54□□□□□ -1.2
RN7SKP235-201ENST00000410662 KDM4CQ9H3R0 1056 aa7.54□□□□□ -1.2
RN7SKP235-201ENST00000410662 GPBP1L1Q9HC44 474 aaPredicted RBP7.54□□□□□ -1.2
RN7SKP235-201ENST00000410662 ERCC6Q03468 1493 aa7.54□□□□□ -1.2
RN7SKP235-201ENST00000410662 PSDA5PKW4 1024 aaPredicted RBP7.53□□□□□ -1.2
RN7SKP235-201ENST00000410662 C6orf132Q5T0Z8 1188 aa7.53□□□□□ -1.2
RN7SKP235-201ENST00000410662 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
RN7SKP235-201ENST00000410662 FANCD2Q9BXW9 1451 aa7.53□□□□□ -1.2
RN7SKP235-201ENST00000410662 LHX6Q9UPM6 363 aa7.52□□□□□ -1.21
RN7SKP235-201ENST00000410662 HOXB1P14653 301 aaPredicted RBP7.51□□□□□ -1.21
RN7SKP235-201ENST00000410662 OTUD5Q96G74 571 aa7.51□□□□□ -1.21
RN7SKP235-201ENST00000410662 ADAM33Q9BZ11 813 aa7.51□□□□□ -1.21
RN7SKP235-201ENST00000410662 RBM27Q9P2N5 1060 aaKnown RBP7.51□□□□□ -1.21
RN7SKP235-201ENST00000410662 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
RN7SKP235-201ENST00000410662 CEP164Q9UPV0 1460 aa7.5□□□□□ -1.21
RN7SKP235-201ENST00000410662 PPP4R3BQ5MIZ7 849 aa7.5□□□□□ -1.21
RN7SKP235-201ENST00000410662 PARP9Q8IXQ6 854 aa7.49□□□□□ -1.21
RN7SKP235-201ENST00000410662 TTC13Q8NBP0 860 aa7.48□□□□□ -1.21
RN7SKP235-201ENST00000410662 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
RN7SKP235-201ENST00000410662 PADI6Q6TGC4 694 aa7.47□□□□□ -1.21
RN7SKP235-201ENST00000410662 MRC2Q9UBG0 1479 aa7.47□□□□□ -1.21
RN7SKP235-201ENST00000410662 OATP04181 439 aa7.46□□□□□ -1.22
RN7SKP235-201ENST00000410662 PRSS12P56730 875 aa7.46□□□□□ -1.22
RN7SKP235-201ENST00000410662 DDRGK1Q96HY6 314 aa7.46□□□□□ -1.22
RN7SKP235-201ENST00000410662 URB2Q14146 1524 aaKnown RBP7.46□□□□□ -1.22
RN7SKP235-201ENST00000410662 TTLL12Q14166 644 aaPredicted RBP7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 LHX8Q68G74 356 aa7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 METTL3Q86U44 580 aaKnown RBP7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 IL27Q8NEV9 243 aa7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 TMUB1Q9BVT8 246 aa7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 WDR62O43379 1518 aa7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 PTPREP23469 700 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 CLCN1P35523 988 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 GIGYF2Q6Y7W6 1299 aaKnown RBP7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 CDCA7LQ96GN5 454 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 PHOX2BQ99453 314 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 ADGRG1Q9Y653 693 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 TOPBP1Q92547 1522 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 ABCC8Q09428 1581 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 DNMBPQ6XZF7 1577 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 COL9A1P20849 921 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 PXYLP1Q8TE99 480 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 GPCPD1Q9NPB8 672 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 CUX2O14529 1486 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 CUX1P39880 1505 aa7.42□□□□□ -1.22
RN7SKP235-201ENST00000410662 REPIN1Q9BWE0 567 aaKnown RBP7.42□□□□□ -1.22
RN7SKP235-201ENST00000410662 PLEKHG3A1L390 1219 aa7.41□□□□□ -1.22
RN7SKP235-201ENST00000410662 MS4A1P11836 297 aa7.41□□□□□ -1.22
RN7SKP235-201ENST00000410662 FAM161AQ3B820 660 aa7.41□□□□□ -1.22
RN7SKP235-201ENST00000410662 MDM2Q00987 491 aaPredicted RBP7.4□□□□□ -1.22
RN7SKP235-201ENST00000410662 RBM46Q8TBY0 533 aaKnown RBP7.4□□□□□ -1.22
RN7SKP235-201ENST00000410662 BIVM-ERCC5R4GMW8 1640 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 SYNJ1O43426 1573 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 GOPCQ9HD26 462 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms