RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 MRC2Q9UBG0 1479 aa11.47□□□□□ -0.57
PBRM1-208ENST00000410007 USP47Q96K76 1375 aa11.47□□□□□ -0.57
PBRM1-208ENST00000410007 CASKIN1Q8WXD9 1431 aa11.46□□□□□ -0.57
PBRM1-208ENST00000410007 GOLGA6L4A6NEF3 574 aa11.46□□□□□ -0.57
PBRM1-208ENST00000410007 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
PBRM1-208ENST00000410007 TMX4Q9H1E5 349 aaPredicted RBP11.46□□□□□ -0.57
PBRM1-208ENST00000410007 CENPJQ9HC77 1338 aaPredicted RBP11.46□□□□□ -0.58
PBRM1-208ENST00000410007 NOP58Q9Y2X3 529 aaKnown RBP11.46□□□□□ -0.58
PBRM1-208ENST00000410007 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
PBRM1-208ENST00000410007 IFT140Q96RY7 1462 aa11.45□□□□□ -0.58
PBRM1-208ENST00000410007 ZNF644Q9H582 1327 aaPredicted RBP11.45□□□□□ -0.58
PBRM1-208ENST00000410007 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
PBRM1-208ENST00000410007 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
PBRM1-208ENST00000410007 GORABQ5T7V8 394 aa11.44□□□□□ -0.58
PBRM1-208ENST00000410007 TAF7LQ5H9L4 462 aa11.43□□□□□ -0.58
PBRM1-208ENST00000410007 GPATCH3Q96I76 525 aa11.43□□□□□ -0.58
PBRM1-208ENST00000410007 ANKRD50Q9ULJ7 1429 aa11.43□□□□□ -0.58
PBRM1-208ENST00000410007 LRRC9Q6ZRR7 1453 aa11.43□□□□□ -0.58
PBRM1-208ENST00000410007 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
PBRM1-208ENST00000410007 KIF21BO75037 1637 aa11.43□□□□□ -0.58
PBRM1-208ENST00000410007 HMGXB3Q12766 1538 aa11.42□□□□□ -0.58
PBRM1-208ENST00000410007 TCERG1O14776 1098 aaKnown RBP11.42□□□□□ -0.58
PBRM1-208ENST00000410007 ERICH3Q5RHP9 1530 aa11.42□□□□□ -0.58
PBRM1-208ENST00000410007 SLC4A10Q6U841 1118 aa11.42□□□□□ -0.58
PBRM1-208ENST00000410007 CHMP3Q9Y3E7 222 aa11.42□□□□□ -0.58
PBRM1-208ENST00000410007 GOLGA6L6A8MZA4 724 aa11.42□□□□□ -0.58
PBRM1-208ENST00000410007 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
PBRM1-208ENST00000410007 NCOA2Q15596 1464 aa11.41□□□□□ -0.58
PBRM1-208ENST00000410007 NRDCO43847 1150 aa11.41□□□□□ -0.58
PBRM1-208ENST00000410007 C1orf141Q5JVX7 400 aa11.41□□□□□ -0.58
PBRM1-208ENST00000410007 GLIPR1L2Q4G1C9 344 aa11.41□□□□□ -0.58
PBRM1-208ENST00000410007 PRKRIP1Q9H875 184 aaPredicted RBP11.41□□□□□ -0.58
PBRM1-208ENST00000410007 CLUAP1Q96AJ1 413 aa11.4□□□□□ -0.58
PBRM1-208ENST00000410007 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
PBRM1-208ENST00000410007 NESP48681 1621 aa11.4□□□□□ -0.58
PBRM1-208ENST00000410007 TULP1O00294 542 aaPredicted RBP11.4□□□□□ -0.58
PBRM1-208ENST00000410007 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
PBRM1-208ENST00000410007 NGEFQ8N5V2 710 aa11.4□□□□□ -0.59
PBRM1-208ENST00000410007 EVA1CP58658 441 aa11.39□□□□□ -0.59
PBRM1-208ENST00000410007 TEFQ10587 303 aa11.39□□□□□ -0.59
PBRM1-208ENST00000410007 CC2D2AQ9P2K1 1620 aa11.39□□□□□ -0.59
PBRM1-208ENST00000410007 ARHGAP5Q13017 1502 aa11.39□□□□□ -0.59
PBRM1-208ENST00000410007 E9PSI1 815 aa11.38□□□□□ -0.59
PBRM1-208ENST00000410007 GNL2Q13823 731 aaKnown RBP11.38□□□□□ -0.59
PBRM1-208ENST00000410007 AFAP1Q8N556 730 aa11.38□□□□□ -0.59
PBRM1-208ENST00000410007 RRP7AQ9Y3A4 280 aaKnown RBP11.38□□□□□ -0.59
PBRM1-208ENST00000410007 TOPBP1Q92547 1522 aa11.38□□□□□ -0.59
PBRM1-208ENST00000410007 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-208ENST00000410007 DNTTIP2Q5QJE6 756 aaKnown RBP11.38□□□□□ -0.59
PBRM1-208ENST00000410007 PSME1Q06323 249 aa11.38□□□□□ -0.59
PBRM1-208ENST00000410007 DIAPH1O60610 1272 aaKnown RBP11.37□□□□□ -0.59
PBRM1-208ENST00000410007 EFCAB5A4FU69 1503 aa11.37□□□□□ -0.59
PBRM1-208ENST00000410007 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
PBRM1-208ENST00000410007 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-208ENST00000410007 PLEKHH2Q8IVE3 1493 aa11.35□□□□□ -0.59
PBRM1-208ENST00000410007 MIA2Q96PC5 1412 aa11.35□□□□□ -0.59
PBRM1-208ENST00000410007 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
PBRM1-208ENST00000410007 HTATSF1O43719 755 aaKnown RBP11.34□□□□□ -0.59
PBRM1-208ENST00000410007 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
PBRM1-208ENST00000410007 ATF3P18847 181 aa11.34□□□□□ -0.59
PBRM1-208ENST00000410007 PTMSP20962 102 aa11.34□□□□□ -0.59
PBRM1-208ENST00000410007 ZKSCAN2Q63HK3 967 aa11.34□□□□□ -0.59
PBRM1-208ENST00000410007 G3V3G9 751 aa11.33□□□□□ -0.6
PBRM1-208ENST00000410007 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
PBRM1-208ENST00000410007 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
PBRM1-208ENST00000410007 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
PBRM1-208ENST00000410007 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
PBRM1-208ENST00000410007 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
PBRM1-208ENST00000410007 ARAP1Q96P48 1450 aa11.33□□□□□ -0.6
PBRM1-208ENST00000410007 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
PBRM1-208ENST00000410007 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
PBRM1-208ENST00000410007 APAF1O14727 1248 aa11.32□□□□□ -0.6
PBRM1-208ENST00000410007 NEXNQ0ZGT2 675 aa11.32□□□□□ -0.6
PBRM1-208ENST00000410007 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
PBRM1-208ENST00000410007 TROQ12816 1431 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-208ENST00000410007 MFAP1P55081 439 aaKnown RBP11.32□□□□□ -0.6
PBRM1-208ENST00000410007 ZBED9Q6R2W3 1325 aa11.31□□□□□ -0.6
PBRM1-208ENST00000410007 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
PBRM1-208ENST00000410007 FRAT2O75474 233 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-208ENST00000410007 RBM19Q9Y4C8 960 aaKnown RBP11.31□□□□□ -0.6
PBRM1-208ENST00000410007 DNMBPQ6XZF7 1577 aa11.3□□□□□ -0.6
PBRM1-208ENST00000410007 EHBP1L1Q8N3D4 1523 aa11.3□□□□□ -0.6
PBRM1-208ENST00000410007 CCDC7Q96M83 1385 aa11.3□□□□□ -0.6
PBRM1-208ENST00000410007 RIPK4P57078 832 aa11.3□□□□□ -0.6
PBRM1-208ENST00000410007 L1TD1Q5T7N2 865 aaKnown RBP11.3□□□□□ -0.6
PBRM1-208ENST00000410007 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
PBRM1-208ENST00000410007 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
PBRM1-208ENST00000410007 API5Q9BZZ5 524 aaKnown RBP11.29□□□□□ -0.6
PBRM1-208ENST00000410007 C9orf84Q5VXU9 1444 aa11.29□□□□□ -0.6
PBRM1-208ENST00000410007 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
PBRM1-208ENST00000410007 TMEM132EQ6IEE7 984 aa11.28□□□□□ -0.6
PBRM1-208ENST00000410007 CENPQQ7L2Z9 268 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-208ENST00000410007 TXNDC2Q86VQ3 553 aa11.28□□□□□ -0.6
PBRM1-208ENST00000410007 RAPGEF4Q8WZA2 1011 aa11.28□□□□□ -0.6
PBRM1-208ENST00000410007 CCDC34Q96HJ3 373 aa11.28□□□□□ -0.6
PBRM1-208ENST00000410007 DDX58O95786 925 aaKnown RBP11.28□□□□□ -0.6
PBRM1-208ENST00000410007 AEBP2Q6ZN18 517 aaPredicted RBP11.28□□□□□ -0.6
PBRM1-208ENST00000410007 SLC52A1Q9NWF4 448 aa11.28□□□□□ -0.6
PBRM1-208ENST00000410007 HSP90B1P14625 803 aaKnown RBP11.27□□□□□ -0.6
PBRM1-208ENST00000410007 THEMISQ8N1K5 641 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms