RNA–Protein interactions for RNA: ENST00000409785.8

KCMF1-201, Transcript of potassium channel modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCMF1, Length 7,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1-201ENST00000409785 VPS37DQ86XT2 251 aa20.55■□□□□ 0.88
KCMF1-201ENST00000409785 SLC4A3P48751 1232 aa20.54■□□□□ 0.88
KCMF1-201ENST00000409785 HTATSF1O43719 755 aaKnown RBP20.53■□□□□ 0.88
KCMF1-201ENST00000409785 MCTP1Q6DN14 999 aa20.53■□□□□ 0.88
KCMF1-201ENST00000409785 APPP05067 770 aa20.52■□□□□ 0.88
KCMF1-201ENST00000409785 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.52■□□□□ 0.887e-7■■■■■ 89.2
KCMF1-201ENST00000409785 RRP7AQ9Y3A4 280 aaKnown RBP20.52■□□□□ 0.88
KCMF1-201ENST00000409785 ELL2O00472 640 aaPredicted RBP20.52■□□□□ 0.87
KCMF1-201ENST00000409785 AKAP17AQ02040 695 aaKnown RBP20.51■□□□□ 0.87
KCMF1-201ENST00000409785 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
KCMF1-201ENST00000409785 GBP4Q96PP9 640 aa20.5■□□□□ 0.87
KCMF1-201ENST00000409785 EIF2S2P20042 333 aaKnown RBP20.5■□□□□ 0.87
KCMF1-201ENST00000409785 TPM3P06753 285 aa20.5■□□□□ 0.87
KCMF1-201ENST00000409785 DEKP35659 375 aaKnown RBP20.5■□□□□ 0.87
KCMF1-201ENST00000409785 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
KCMF1-201ENST00000409785 C1orf141Q5JVX7 400 aa20.48■□□□□ 0.87
KCMF1-201ENST00000409785 KIF16BQ96L93 1317 aa20.47■□□□□ 0.87
KCMF1-201ENST00000409785 ZNF428Q96B54 188 aa20.46■□□□□ 0.87
KCMF1-201ENST00000409785 FAM184AQ8NB25 1140 aa20.46■□□□□ 0.87
KCMF1-201ENST00000409785 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
KCMF1-201ENST00000409785 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
KCMF1-201ENST00000409785 TSR1Q2NL82 804 aaKnown RBP20.45■□□□□ 0.86
KCMF1-201ENST00000409785 CCDC34Q96HJ3 373 aa20.45■□□□□ 0.86
KCMF1-201ENST00000409785 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
KCMF1-201ENST00000409785 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
KCMF1-201ENST00000409785 PKD2Q13563 968 aa20.43■□□□□ 0.86
KCMF1-201ENST00000409785 CALD1Q05682 793 aaKnown RBP20.43■□□□□ 0.86
KCMF1-201ENST00000409785 AMOTL1Q8IY63 956 aa20.43■□□□□ 0.86
KCMF1-201ENST00000409785 TRAK1Q9UPV9 953 aa20.42■□□□□ 0.86
KCMF1-201ENST00000409785 CCDC43Q96MW1 224 aaKnown RBP20.42■□□□□ 0.86
KCMF1-201ENST00000409785 BCL2L13Q9BXK5 485 aa20.42■□□□□ 0.86
KCMF1-201ENST00000409785 IBSPP21815 317 aaPredicted RBP20.42■□□□□ 0.86
KCMF1-201ENST00000409785 PLIN1O60240 522 aa20.41■□□□□ 0.86
KCMF1-201ENST00000409785 FAM177BA6PVY3 158 aa20.41■□□□□ 0.86
KCMF1-201ENST00000409785 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
KCMF1-201ENST00000409785 ZNF592Q92610 1267 aa20.41■□□□□ 0.86
KCMF1-201ENST00000409785 RWDD1Q9H446 243 aaPredicted RBP20.4■□□□□ 0.86
KCMF1-201ENST00000409785 KIF3BO15066 747 aa20.4■□□□□ 0.86
KCMF1-201ENST00000409785 HSPA5P11021 654 aaKnown RBP20.4■□□□□ 0.86
KCMF1-201ENST00000409785 TPM2P07951 284 aa20.39■□□□□ 0.86
KCMF1-201ENST00000409785 HNRNPMP52272 730 aaKnown RBP eCLIP20.39■□□□□ 0.851e-6■■■■□ 22.6
KCMF1-201ENST00000409785 RCAN3Q9UKA8 241 aa20.38■□□□□ 0.85
KCMF1-201ENST00000409785 CCDC27Q2M243 656 aa20.38■□□□□ 0.85
KCMF1-201ENST00000409785 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
KCMF1-201ENST00000409785 ZFYVE27Q5T4F4 411 aa20.37■□□□□ 0.85
KCMF1-201ENST00000409785 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
KCMF1-201ENST00000409785 TMEM132AQ24JP5 1023 aa20.37■□□□□ 0.85
KCMF1-201ENST00000409785 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
KCMF1-201ENST00000409785 TCERG1O14776 1098 aaKnown RBP20.36■□□□□ 0.85
KCMF1-201ENST00000409785 SYNE3Q6ZMZ3 975 aa20.36■□□□□ 0.85
KCMF1-201ENST00000409785 IKQ13123 557 aaPredicted RBP20.36■□□□□ 0.85
KCMF1-201ENST00000409785 USP35Q9P2H5 1018 aa20.36■□□□□ 0.85
KCMF1-201ENST00000409785 SKIDA1Q1XH10 827 aa20.35■□□□□ 0.85
KCMF1-201ENST00000409785 PAF1Q8N7H5 531 aa20.35■□□□□ 0.85
KCMF1-201ENST00000409785 NAP1L1P55209 391 aaKnown RBP20.35■□□□□ 0.85
KCMF1-201ENST00000409785 CSPP1Q1MSJ5 1256 aa20.35■□□□□ 0.85
KCMF1-201ENST00000409785 HMMRO75330 724 aa20.34■□□□□ 0.85
KCMF1-201ENST00000409785 ANKRD45Q5TZF3 282 aa20.34■□□□□ 0.85
KCMF1-201ENST00000409785 CCAR1Q8IX12 1150 aaKnown RBP20.34■□□□□ 0.85
KCMF1-201ENST00000409785 VSIG10Q8N0Z9 540 aa20.34■□□□□ 0.85
KCMF1-201ENST00000409785 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
KCMF1-201ENST00000409785 NFXL1Q6ZNB6 911 aa20.34■□□□□ 0.85
KCMF1-201ENST00000409785 TTC5Q8N0Z6 440 aa20.34■□□□□ 0.85
KCMF1-201ENST00000409785 RBM33Q96EV2 1170 aaKnown RBP20.34■□□□□ 0.85
KCMF1-201ENST00000409785 PTMSP20962 102 aa20.34■□□□□ 0.85
KCMF1-201ENST00000409785 NUTM2GQ5VZR2 741 aa20.34■□□□□ 0.85
KCMF1-201ENST00000409785 PSME1Q06323 249 aa20.33■□□□□ 0.84
KCMF1-201ENST00000409785 GOLGA6L19H0YKK7 550 aa20.32■□□□□ 0.84
KCMF1-201ENST00000409785 C9orf78Q9NZ63 289 aaPredicted RBP20.32■□□□□ 0.84
KCMF1-201ENST00000409785 STK11IPQ8N1F8 1099 aa20.32■□□□□ 0.84
KCMF1-201ENST00000409785 ODF2Q5BJF6 829 aa20.31■□□□□ 0.84
KCMF1-201ENST00000409785 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
KCMF1-201ENST00000409785 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
KCMF1-201ENST00000409785 TRIM29Q14134 588 aa20.29■□□□□ 0.84
KCMF1-201ENST00000409785 CT47A1Q5JQC4 288 aaPredicted RBP20.28■□□□□ 0.84
KCMF1-201ENST00000409785 AIMP1Q12904 312 aaKnown RBP20.28■□□□□ 0.84
KCMF1-201ENST00000409785 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
KCMF1-201ENST00000409785 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.84
KCMF1-201ENST00000409785 GOLGA6L3A6NEY3 463 aa20.27■□□□□ 0.84
KCMF1-201ENST00000409785 ANO2Q9NQ90 1003 aa20.27■□□□□ 0.84
KCMF1-201ENST00000409785 SETQ01105 290 aaPredicted RBP20.27■□□□□ 0.83
KCMF1-201ENST00000409785 ST18O60284 1047 aa20.26■□□□□ 0.83
KCMF1-201ENST00000409785 TEFQ10587 303 aa20.26■□□□□ 0.83
KCMF1-201ENST00000409785 TPM1P09493 284 aa20.24■□□□□ 0.83
KCMF1-201ENST00000409785 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
KCMF1-201ENST00000409785 BECN2A8MW95 431 aa20.24■□□□□ 0.83
KCMF1-201ENST00000409785 EPS15P42566 896 aa20.23■□□□□ 0.83
KCMF1-201ENST00000409785 R3HCC1Q9Y3T6 440 aaKnown RBP20.23■□□□□ 0.83
KCMF1-201ENST00000409785 TTLL5Q6EMB2 1281 aa20.23■□□□□ 0.83
KCMF1-201ENST00000409785 NUP155O75694 1391 aa20.23■□□□□ 0.83
KCMF1-201ENST00000409785 PHF14O94880 888 aa20.23■□□□□ 0.83
KCMF1-201ENST00000409785 NUTM2BA6NNL0 878 aaPredicted RBP20.22■□□□□ 0.83
KCMF1-201ENST00000409785 NUTM2EB1AL46 878 aaPredicted RBP20.22■□□□□ 0.83
KCMF1-201ENST00000409785 NUTM2AQ8IVF1 878 aaPredicted RBP20.22■□□□□ 0.83
KCMF1-201ENST00000409785 ATP2B2Q01814 1243 aa20.21■□□□□ 0.83
KCMF1-201ENST00000409785 ERICH2A1L162 156 aa20.21■□□□□ 0.83
KCMF1-201ENST00000409785 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
KCMF1-201ENST00000409785 HSP90AB2PQ58FF8 381 aa20.21■□□□□ 0.83
KCMF1-201ENST00000409785 PPM1FP49593 454 aaPredicted RBP20.2■□□□□ 0.82
KCMF1-201ENST00000409785 DHX37Q8IY37 1157 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms