RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 MYT1LQ9UL68 1186 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 CLEC11AQ9Y240 323 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 TONSLQ96HA7 1378 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 ADGRL2O95490 1459 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 EPRSP07814 1512 aaKnown RBP4.38□□□□□ -1.71
CUL3-204ENST00000409777 PLEKHG5O94827 1062 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 EVX2Q03828 476 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 SMG6Q86US8 1419 aaKnown RBP4.38□□□□□ -1.71
CUL3-204ENST00000409777 LMTK3Q96Q04 1460 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 ZMYM4Q5VZL5 1548 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 ITSN2Q9NZM3 1697 aa4.38□□□□□ -1.71
CUL3-204ENST00000409777 CCDC7Q96M83 1385 aa4.37□□□□□ -1.71
CUL3-204ENST00000409777 ANKRD30BQ9BXX2 1392 aa4.37□□□□□ -1.71
CUL3-204ENST00000409777 GAPVD1Q14C86 1478 aa4.37□□□□□ -1.71
CUL3-204ENST00000409777 LAMC1P11047 1609 aa4.37□□□□□ -1.71
CUL3-204ENST00000409777 ZBED9Q6R2W3 1325 aa4.37□□□□□ -1.71
CUL3-204ENST00000409777 DHX29Q7Z478 1369 aaKnown RBP4.37□□□□□ -1.71
CUL3-204ENST00000409777 ARHGEF12Q9NZN5 1544 aa4.37□□□□□ -1.71
CUL3-204ENST00000409777 PZPP20742 1482 aa4.37□□□□□ -1.71
CUL3-204ENST00000409777 UHRF1BP1Q6BDS2 1440 aa4.37□□□□□ -1.71
CUL3-204ENST00000409777 NEFLP07196 543 aa4.36□□□□□ -1.71
CUL3-204ENST00000409777 RANGAP1P46060 587 aaPredicted RBP4.36□□□□□ -1.71
CUL3-204ENST00000409777 NUBP1P53384 320 aa4.36□□□□□ -1.71
CUL3-204ENST00000409777 GSE1Q14687 1217 aa4.36□□□□□ -1.71
CUL3-204ENST00000409777 HS6ST3Q8IZP7 471 aa4.36□□□□□ -1.71
CUL3-204ENST00000409777 KIAA0556O60303 1618 aa4.36□□□□□ -1.71
CUL3-204ENST00000409777 CEP170Q5SW79 1584 aa4.36□□□□□ -1.71
CUL3-204ENST00000409777 CHGAP10645 457 aaKnown RBP4.36□□□□□ -1.71
CUL3-204ENST00000409777 PPP4R2Q9NY27 417 aa4.36□□□□□ -1.71
CUL3-204ENST00000409777 DAPK1P53355 1430 aa4.36□□□□□ -1.71
CUL3-204ENST00000409777 ERICH6Q7L0X2 663 aa4.35□□□□□ -1.71
CUL3-204ENST00000409777 CREBZFQ9NS37 354 aa4.35□□□□□ -1.71
CUL3-204ENST00000409777 CDC42BPAQ5VT25 1732 aa4.35□□□□□ -1.71
CUL3-204ENST00000409777 INSRP06213 1382 aa4.35□□□□□ -1.71
CUL3-204ENST00000409777 MTUS2Q5JR59 1369 aa4.35□□□□□ -1.71
CUL3-204ENST00000409777 CHRM1P11229 460 aaPredicted RBP4.35□□□□□ -1.71
CUL3-204ENST00000409777 RAPGEF6Q8TEU7 1601 aa4.35□□□□□ -1.71
CUL3-204ENST00000409777 ARID4BQ4LE39 1312 aaPredicted RBP4.35□□□□□ -1.71
CUL3-204ENST00000409777 FAM50AQ14320 339 aaKnown RBP4.35□□□□□ -1.71
CUL3-204ENST00000409777 LHX8Q68G74 356 aa4.35□□□□□ -1.71
CUL3-204ENST00000409777 ABCC5O15440 1437 aa4.34□□□□□ -1.71
CUL3-204ENST00000409777 RIMBP3CA6NJZ7 1639 aa4.34□□□□□ -1.71
CUL3-204ENST00000409777 RIMBP3BA6NNM3 1639 aa4.34□□□□□ -1.71
CUL3-204ENST00000409777 RIMBP3Q9UFD9 1639 aa4.34□□□□□ -1.71
CUL3-204ENST00000409777 RALGAPBQ86X10 1494 aa4.34□□□□□ -1.71
CUL3-204ENST00000409777 SHANK2Q9UPX8 1470 aa4.34□□□□□ -1.71
CUL3-204ENST00000409777 HSPA5P11021 654 aaKnown RBP4.34□□□□□ -1.71
CUL3-204ENST00000409777 SGIP1Q9BQI5 828 aa4.34□□□□□ -1.71
CUL3-204ENST00000409777 PRKRIP1Q9H875 184 aaPredicted RBP4.34□□□□□ -1.71
CUL3-204ENST00000409777 LRPPRCP42704 1394 aaKnown RBP4.34□□□□□ -1.71
CUL3-204ENST00000409777 DISP1Q96F81 1524 aa4.34□□□□□ -1.71
CUL3-204ENST00000409777 CD44P16070 742 aaKnown RBP4.34□□□□□ -1.72
CUL3-204ENST00000409777 TRIM52Q96A61 297 aa4.34□□□□□ -1.72
CUL3-204ENST00000409777 ITGAEP38570 1179 aa4.33□□□□□ -1.72
CUL3-204ENST00000409777 CDK13Q14004 1512 aaKnown RBP4.33□□□□□ -1.72
CUL3-204ENST00000409777 MNX1P50219 401 aaPredicted RBP4.33□□□□□ -1.72
CUL3-204ENST00000409777 NUP153P49790 1475 aaKnown RBP4.33□□□□□ -1.72
CUL3-204ENST00000409777 PTPRGP23470 1445 aa4.33□□□□□ -1.72
CUL3-204ENST00000409777 TRPM1Q7Z4N2 1603 aa4.32□□□□□ -1.72
CUL3-204ENST00000409777 C11orf95C9JLR9 678 aaPredicted RBP4.32□□□□□ -1.72
CUL3-204ENST00000409777 CCDC184Q52MB2 194 aa4.32□□□□□ -1.72
CUL3-204ENST00000409777 KTN1Q86UP2 1357 aaKnown RBP4.32□□□□□ -1.72
CUL3-204ENST00000409777 ARHGEF5Q12774 1597 aa4.32□□□□□ -1.72
CUL3-204ENST00000409777 CDK11AQ9UQ88 783 aaPredicted RBP4.32□□□□□ -1.72
CUL3-204ENST00000409777 RNF17Q9BXT8 1623 aaKnown RBP4.32□□□□□ -1.72
CUL3-204ENST00000409777 EIF4G2P78344 907 aaKnown RBP eCLIP4.31□□□□□ -1.72
CUL3-204ENST00000409777 FBXO41Q8TF61 875 aa4.31□□□□□ -1.72
CUL3-204ENST00000409777 CIZ1Q9ULV3 898 aaPredicted RBP4.31□□□□□ -1.72
CUL3-204ENST00000409777 KIF7Q2M1P5 1343 aa4.31□□□□□ -1.72
CUL3-204ENST00000409777 PAK3O75914 559 aaPredicted RBP4.31□□□□□ -1.72
CUL3-204ENST00000409777 MPHOSPH9Q99550 1183 aa4.31□□□□□ -1.72
CUL3-204ENST00000409777 VIRMAQ69YN4 1812 aaKnown RBP4.31□□□□□ -1.72
CUL3-204ENST00000409777 UNC13BO14795 1591 aa4.31□□□□□ -1.72
CUL3-204ENST00000409777 EIF4G3O43432 1585 aaKnown RBP4.31□□□□□ -1.72
CUL3-204ENST00000409777 ERCC6Q03468 1493 aa4.31□□□□□ -1.72
CUL3-204ENST00000409777 CAMSAP2Q08AD1 1489 aa4.31□□□□□ -1.72
CUL3-204ENST00000409777 KIAA0586Q9BVV6 1533 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 HNRNPUQ00839 825 aaKnown RBP eCLIP4.3□□□□□ -1.72
CUL3-204ENST00000409777 NBPF8Q3BBV2 869 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 RNF25Q96BH1 459 aaPredicted RBP4.3□□□□□ -1.72
CUL3-204ENST00000409777 KIAA1107Q9UPP5 1409 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 MAST1Q9Y2H9 1570 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 ABCC10Q5T3U5 1492 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 ROCK2O75116 1388 aaKnown RBP4.3□□□□□ -1.72
CUL3-204ENST00000409777 ZNF608Q9ULD9 1512 aaPredicted RBP4.3□□□□□ -1.72
CUL3-204ENST00000409777 BRPF1P55201 1214 aaPredicted RBP4.3□□□□□ -1.72
CUL3-204ENST00000409777 L3MBTL2Q969R5 705 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 HIRIP3Q9BW71 556 aaPredicted RBP4.3□□□□□ -1.72
CUL3-204ENST00000409777 CLASP1Q7Z460 1538 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 ABCA8O94911 1581 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 PDS5BQ9NTI5 1447 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 PCDH10Q9P2E7 1040 aa4.3□□□□□ -1.72
CUL3-204ENST00000409777 RIOK3O14730 519 aaKnown RBP4.29□□□□□ -1.72
CUL3-204ENST00000409777 NPM2Q86SE8 214 aaKnown RBP4.29□□□□□ -1.72
CUL3-204ENST00000409777 PRDM15P57071 1507 aaPredicted RBP4.29□□□□□ -1.72
CUL3-204ENST00000409777 MYO5CQ9NQX4 1742 aa4.29□□□□□ -1.72
CUL3-204ENST00000409777 GPATCH8Q9UKJ3 1502 aaKnown RBP4.29□□□□□ -1.72
CUL3-204ENST00000409777 TROQ12816 1431 aaPredicted RBP4.29□□□□□ -1.72
CUL3-204ENST00000409777 CHADLQ6NUI6 762 aa4.28□□□□□ -1.72
CUL3-204ENST00000409777 BLMP54132 1417 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms