RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 NCOA1Q15788 1441 aa9.02□□□□□ -0.97
GTF3C3-202ENST00000409364 KCNH8Q96L42 1107 aa9.02□□□□□ -0.97
GTF3C3-202ENST00000409364 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
GTF3C3-202ENST00000409364 HNRNPMP52272 730 aaKnown RBP eCLIP9□□□□□ -0.97
GTF3C3-202ENST00000409364 ITSN2Q9NZM3 1697 aa9□□□□□ -0.97
GTF3C3-202ENST00000409364 KDM5BQ9UGL1 1544 aa9□□□□□ -0.97
GTF3C3-202ENST00000409364 POTEJP0CG39 1038 aa9□□□□□ -0.97
GTF3C3-202ENST00000409364 EFCAB2Q5VUJ9 269 aa9□□□□□ -0.97
GTF3C3-202ENST00000409364 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
GTF3C3-202ENST00000409364 ADGRL2O95490 1459 aa8.99□□□□□ -0.97
GTF3C3-202ENST00000409364 SLC4A1APQ9BWU0 796 aaKnown RBP8.99□□□□□ -0.97
GTF3C3-202ENST00000409364 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
GTF3C3-202ENST00000409364 PELP1Q8IZL8 1130 aaKnown RBP8.97□□□□□ -0.97
GTF3C3-202ENST00000409364 SHANK2Q9UPX8 1470 aa8.97□□□□□ -0.97
GTF3C3-202ENST00000409364 KIAA1107Q9UPP5 1409 aa8.97□□□□□ -0.97
GTF3C3-202ENST00000409364 PLEKHH2Q8IVE3 1493 aa8.96□□□□□ -0.97
GTF3C3-202ENST00000409364 MBD5Q9P267 1494 aa8.96□□□□□ -0.97
GTF3C3-202ENST00000409364 PLCH2O75038 1416 aa8.96□□□□□ -0.97
GTF3C3-202ENST00000409364 C9orf84Q5VXU9 1444 aa8.96□□□□□ -0.97
GTF3C3-202ENST00000409364 ANKRD50Q9ULJ7 1429 aa8.96□□□□□ -0.97
GTF3C3-202ENST00000409364 GCC2Q8IWJ2 1684 aa8.96□□□□□ -0.98
GTF3C3-202ENST00000409364 ANKRD30BQ9BXX2 1392 aa8.94□□□□□ -0.98
GTF3C3-202ENST00000409364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.94□□□□□ -0.98
GTF3C3-202ENST00000409364 ARHGEF5Q12774 1597 aa8.94□□□□□ -0.98
GTF3C3-202ENST00000409364 CCDC141Q6ZP82 1450 aa8.94□□□□□ -0.98
GTF3C3-202ENST00000409364 RIMBP3CA6NJZ7 1639 aa8.94□□□□□ -0.98
GTF3C3-202ENST00000409364 RIMBP3BA6NNM3 1639 aa8.94□□□□□ -0.98
GTF3C3-202ENST00000409364 RIMBP3Q9UFD9 1639 aa8.94□□□□□ -0.98
GTF3C3-202ENST00000409364 CDC42BPAQ5VT25 1732 aa8.93□□□□□ -0.98
GTF3C3-202ENST00000409364 ARHGAP5Q13017 1502 aa8.93□□□□□ -0.98
GTF3C3-202ENST00000409364 DENND4BO75064 1496 aaPredicted RBP8.93□□□□□ -0.98
GTF3C3-202ENST00000409364 KDM6BO15054 1643 aa8.93□□□□□ -0.98
GTF3C3-202ENST00000409364 KIF15Q9NS87 1388 aa8.92□□□□□ -0.98
GTF3C3-202ENST00000409364 NUP155O75694 1391 aa8.92□□□□□ -0.98
GTF3C3-202ENST00000409364 PAK3O75914 559 aaPredicted RBP8.91□□□□□ -0.98
GTF3C3-202ENST00000409364 PKD2Q13563 968 aa8.91□□□□□ -0.98
GTF3C3-202ENST00000409364 ZCCHC11Q5TAX3 1644 aaKnown RBP8.91□□□□□ -0.98
GTF3C3-202ENST00000409364 PREX2Q70Z35 1606 aa8.91□□□□□ -0.98
GTF3C3-202ENST00000409364 L3MBTL2Q969R5 705 aa8.91□□□□□ -0.98
GTF3C3-202ENST00000409364 WDR7Q9Y4E6 1490 aa8.91□□□□□ -0.98
GTF3C3-202ENST00000409364 ASTLQ6HA08 431 aaPredicted RBP8.9□□□□□ -0.98
GTF3C3-202ENST00000409364 CYB5RLQ6IPT4 315 aa8.9□□□□□ -0.98
GTF3C3-202ENST00000409364 MIER1Q8N108 512 aa8.9□□□□□ -0.98
GTF3C3-202ENST00000409364 SAMD9LQ8IVG5 1584 aa8.9□□□□□ -0.99
GTF3C3-202ENST00000409364 TTC37Q6PGP7 1564 aa8.89□□□□□ -0.99
GTF3C3-202ENST00000409364 PZPP20742 1482 aa8.89□□□□□ -0.99
GTF3C3-202ENST00000409364 ARAP3Q8WWN8 1544 aa8.89□□□□□ -0.99
GTF3C3-202ENST00000409364 DNAJC5Q9H3Z4 198 aa8.88□□□□□ -0.99
GTF3C3-202ENST00000409364 ADGBQ8N7X0 1667 aa8.88□□□□□ -0.99
GTF3C3-202ENST00000409364 CDC42BPBQ9Y5S2 1711 aa8.88□□□□□ -0.99
GTF3C3-202ENST00000409364 ASXL2Q76L83 1435 aa8.88□□□□□ -0.99
GTF3C3-202ENST00000409364 RPRD2Q5VT52 1461 aaKnown RBP8.88□□□□□ -0.99
GTF3C3-202ENST00000409364 SPAG9O60271 1321 aaKnown RBP8.88□□□□□ -0.99
GTF3C3-202ENST00000409364 CROCC2H7BZ55 1655 aa8.87□□□□□ -0.99
GTF3C3-202ENST00000409364 RTEL1-TNFRSF6BF6WH68 1400 aa8.87□□□□□ -0.99
GTF3C3-202ENST00000409364 SYCP2Q9BX26 1530 aa8.87□□□□□ -0.99
GTF3C3-202ENST00000409364 AFAP1Q8N556 730 aa8.86□□□□□ -0.99
GTF3C3-202ENST00000409364 MAST1Q9Y2H9 1570 aa8.86□□□□□ -0.99
GTF3C3-202ENST00000409364 ARHGEF12Q9NZN5 1544 aa8.86□□□□□ -0.99
GTF3C3-202ENST00000409364 MYO5CQ9NQX4 1742 aa8.85□□□□□ -0.99
GTF3C3-202ENST00000409364 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.99
GTF3C3-202ENST00000409364 KDM5DQ9BY66 1539 aa8.84□□□□□ -0.99
GTF3C3-202ENST00000409364 TRAPPC8Q9Y2L5 1435 aa8.84□□□□□ -0.99
GTF3C3-202ENST00000409364 CENPBP07199 599 aaPredicted RBP8.84□□□□□ -0.99
GTF3C3-202ENST00000409364 DUOX2Q9NRD8 1548 aa8.84□□□□□ -0.99
GTF3C3-202ENST00000409364 FANCAO15360 1455 aa8.84□□□□□ -0.99
GTF3C3-202ENST00000409364 ATMINO43313 823 aaPredicted RBP8.83□□□□□ -1
GTF3C3-202ENST00000409364 DDX10Q13206 875 aaKnown RBP8.83□□□□□ -1
GTF3C3-202ENST00000409364 ERBINQ96RT1 1412 aa8.83□□□□□ -1
GTF3C3-202ENST00000409364 SCAPERQ9BY12 1400 aa8.82□□□□□ -1
GTF3C3-202ENST00000409364 ABCC1P33527 1531 aa8.82□□□□□ -1
GTF3C3-202ENST00000409364 HSPA5P11021 654 aaKnown RBP8.82□□□□□ -1
GTF3C3-202ENST00000409364 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
GTF3C3-202ENST00000409364 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
GTF3C3-202ENST00000409364 CD109Q6YHK3 1445 aa8.82□□□□□ -1
GTF3C3-202ENST00000409364 ABCA9Q8IUA7 1624 aa8.81□□□□□ -1
GTF3C3-202ENST00000409364 NBPF8Q3BBV2 869 aa8.81□□□□□ -1
GTF3C3-202ENST00000409364 PLXNC1O60486 1568 aa8.81□□□□□ -1
GTF3C3-202ENST00000409364 ADGRL1O94910 1474 aa8.8□□□□□ -1
GTF3C3-202ENST00000409364 TEX14Q8IWB6 1497 aa8.8□□□□□ -1
GTF3C3-202ENST00000409364 FAM135AQ9P2D6 1515 aa8.79□□□□□ -1
GTF3C3-202ENST00000409364 DHX29Q7Z478 1369 aaKnown RBP8.79□□□□□ -1
GTF3C3-202ENST00000409364 PHF12Q96QT6 1004 aa8.79□□□□□ -1
GTF3C3-202ENST00000409364 KCNA4P22459 653 aa8.78□□□□□ -1
GTF3C3-202ENST00000409364 CCDC144AA2RUR9 1427 aa8.78□□□□□ -1
GTF3C3-202ENST00000409364 ST18O60284 1047 aa8.77□□□□□ -1
GTF3C3-202ENST00000409364 DCAF11Q8TEB1 546 aa8.77□□□□□ -1
GTF3C3-202ENST00000409364 KANK1Q14678 1352 aa8.77□□□□□ -1.01
GTF3C3-202ENST00000409364 KIF3BO15066 747 aa8.77□□□□□ -1.01
GTF3C3-202ENST00000409364 ANP32CO43423 234 aa8.77□□□□□ -1.01
GTF3C3-202ENST00000409364 STAC3Q96MF2 364 aa8.77□□□□□ -1.01
GTF3C3-202ENST00000409364 UHRF1BP1Q6BDS2 1440 aa8.76□□□□□ -1.01
GTF3C3-202ENST00000409364 ATP10AO60312 1499 aa8.76□□□□□ -1.01
GTF3C3-202ENST00000409364 ZNF518AQ6AHZ1 1483 aa8.76□□□□□ -1.01
GTF3C3-202ENST00000409364 UNC13BO14795 1591 aa8.75□□□□□ -1.01
GTF3C3-202ENST00000409364 MAGI2Q86UL8 1455 aa8.75□□□□□ -1.01
GTF3C3-202ENST00000409364 ZNF326Q5BKZ1 582 aaKnown RBP8.75□□□□□ -1.01
GTF3C3-202ENST00000409364 KDM2AQ9Y2K7 1162 aa8.75□□□□□ -1.01
GTF3C3-202ENST00000409364 ZFYVE16Q7Z3T8 1539 aa8.74□□□□□ -1.01
GTF3C3-202ENST00000409364 YTHDC1Q96MU7 727 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms