RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 ZNF454Q8N9F8 522 aa5.73□□□□□ -1.49
CUL3-203ENST00000409096 NLRP7Q8WX94 980 aa5.73□□□□□ -1.49
CUL3-203ENST00000409096 PHOX2BQ99453 314 aa5.73□□□□□ -1.49
CUL3-203ENST00000409096 REPIN1Q9BWE0 567 aaKnown RBP5.73□□□□□ -1.49
CUL3-203ENST00000409096 JPH4Q96JJ6 628 aa5.72□□□□□ -1.49
CUL3-203ENST00000409096 TYW1BQ6NUM6 668 aa5.71□□□□□ -1.49
CUL3-203ENST00000409096 EPAS1Q99814 870 aa5.71□□□□□ -1.49
CUL3-203ENST00000409096 ADAM33Q9BZ11 813 aa5.71□□□□□ -1.49
CUL3-203ENST00000409096 AMHR2Q16671 573 aa5.7□□□□□ -1.5
CUL3-203ENST00000409096 TTLL12Q14166 644 aaPredicted RBP5.7□□□□□ -1.5
CUL3-203ENST00000409096 SCUBE2Q9NQ36 999 aa5.7□□□□□ -1.5
CUL3-203ENST00000409096 LHX6Q9UPM6 363 aa5.7□□□□□ -1.5
CUL3-203ENST00000409096 PLEKHG3A1L390 1219 aa5.69□□□□□ -1.5
CUL3-203ENST00000409096 DOK7Q18PE1 504 aa5.69□□□□□ -1.5
CUL3-203ENST00000409096 C6orf132Q5T0Z8 1188 aa5.69□□□□□ -1.5
CUL3-203ENST00000409096 PADI6Q6TGC4 694 aa5.69□□□□□ -1.5
CUL3-203ENST00000409096 ZDHHC16Q969W1 377 aa5.69□□□□□ -1.5
CUL3-203ENST00000409096 MS4A1P11836 297 aa5.68□□□□□ -1.5
CUL3-203ENST00000409096 ZNF710Q8N1W2 664 aa5.68□□□□□ -1.5
CUL3-203ENST00000409096 FBXW7Q969H0 707 aa5.68□□□□□ -1.5
CUL3-203ENST00000409096 GIGYF2Q6Y7W6 1299 aaKnown RBP5.68□□□□□ -1.5
CUL3-203ENST00000409096 OTUD5Q96G74 571 aa5.67□□□□□ -1.5
CUL3-203ENST00000409096 COL9A1P20849 921 aa5.67□□□□□ -1.5
CUL3-203ENST00000409096 MDM2Q00987 491 aaPredicted RBP5.67□□□□□ -1.5
CUL3-203ENST00000409096 C3orf80F5H4A9 247 aa5.66□□□□□ -1.5
CUL3-203ENST00000409096 FAM198AQ9UFP1 575 aa5.66□□□□□ -1.5
CUL3-203ENST00000409096 RIMBP2O15034 1052 aa5.66□□□□□ -1.5
CUL3-203ENST00000409096 METTL3Q86U44 580 aaKnown RBP5.66□□□□□ -1.5
CUL3-203ENST00000409096 ZSWIM6Q9HCJ5 1215 aa5.65□□□□□ -1.51
CUL3-203ENST00000409096 ADGRG1Q9Y653 693 aa5.64□□□□□ -1.51
CUL3-203ENST00000409096 MAMSTRQ6ZN01 415 aa5.64□□□□□ -1.51
CUL3-203ENST00000409096 C14orf37Q86TY3 774 aa5.64□□□□□ -1.51
CUL3-203ENST00000409096 CDCA7LQ96GN5 454 aa5.64□□□□□ -1.51
CUL3-203ENST00000409096 TMUB1Q9BVT8 246 aa5.63□□□□□ -1.51
CUL3-203ENST00000409096 TTC13Q8NBP0 860 aa5.63□□□□□ -1.51
CUL3-203ENST00000409096 PXYLP1Q8TE99 480 aa5.63□□□□□ -1.51
CUL3-203ENST00000409096 TSKSQ9UJT2 592 aa5.63□□□□□ -1.51
CUL3-203ENST00000409096 HOXB1P14653 301 aaPredicted RBP5.62□□□□□ -1.51
CUL3-203ENST00000409096 PRSS12P56730 875 aa5.62□□□□□ -1.51
CUL3-203ENST00000409096 DDRGK1Q96HY6 314 aa5.62□□□□□ -1.51
CUL3-203ENST00000409096 BCL2L12Q9HB09 334 aa5.62□□□□□ -1.51
CUL3-203ENST00000409096 GPCPD1Q9NPB8 672 aa5.62□□□□□ -1.51
CUL3-203ENST00000409096 PPP4R3BQ5MIZ7 849 aa5.61□□□□□ -1.51
CUL3-203ENST00000409096 PROX2Q3B8N5 592 aa5.61□□□□□ -1.51
CUL3-203ENST00000409096 CERKQ8TCT0 537 aa5.61□□□□□ -1.51
CUL3-203ENST00000409096 SMAPO00193 183 aa5.6□□□□□ -1.51
CUL3-203ENST00000409096 SSTR3P32745 418 aaPredicted RBP5.6□□□□□ -1.51
CUL3-203ENST00000409096 CLCN1P35523 988 aa5.6□□□□□ -1.51
CUL3-203ENST00000409096 FAM217BQ9NTX9 383 aaPredicted RBP5.6□□□□□ -1.51
CUL3-203ENST00000409096 RBM27Q9P2N5 1060 aaKnown RBP5.6□□□□□ -1.51
CUL3-203ENST00000409096 POTEEQ6S8J3 1075 aa5.59□□□□□ -1.51
CUL3-203ENST00000409096 KCNK17Q96T54 332 aa5.59□□□□□ -1.51
CUL3-203ENST00000409096 BEGAINQ9BUH8 593 aa5.59□□□□□ -1.51
CUL3-203ENST00000409096 PTPREP23469 700 aa5.59□□□□□ -1.52
CUL3-203ENST00000409096 PSEN2P49810 448 aa5.59□□□□□ -1.52
CUL3-203ENST00000409096 PPP1R3GB7ZBB8 358 aa5.58□□□□□ -1.52
CUL3-203ENST00000409096 OATP04181 439 aa5.58□□□□□ -1.52
CUL3-203ENST00000409096 NUDT18Q6ZVK8 323 aa5.58□□□□□ -1.52
CUL3-203ENST00000409096 MARVELD3Q96A59 401 aa5.58□□□□□ -1.52
CUL3-203ENST00000409096 AXIN2Q9Y2T1 843 aa5.58□□□□□ -1.52
CUL3-203ENST00000409096 RCCD1A6NED2 376 aa5.57□□□□□ -1.52
CUL3-203ENST00000409096 SNPHO15079 494 aa5.57□□□□□ -1.52
CUL3-203ENST00000409096 LHX8Q68G74 356 aa5.57□□□□□ -1.52
CUL3-203ENST00000409096 EYA1Q99502 592 aa5.57□□□□□ -1.52
CUL3-203ENST00000409096 VARS2Q5ST30 1063 aaKnown RBP5.56□□□□□ -1.52
CUL3-203ENST00000409096 TRIM6-TRIM34B2RNG4 842 aa5.56□□□□□ -1.52
CUL3-203ENST00000409096 RBM46Q8TBY0 533 aaKnown RBP5.56□□□□□ -1.52
CUL3-203ENST00000409096 POLR3EQ9NVU0 708 aa5.56□□□□□ -1.52
CUL3-203ENST00000409096 PNMA3Q9UL41 463 aa5.56□□□□□ -1.52
CUL3-203ENST00000409096 PSDA5PKW4 1024 aaPredicted RBP5.55□□□□□ -1.52
CUL3-203ENST00000409096 SUPT5HO00267 1087 aaKnown RBP5.55□□□□□ -1.52
CUL3-203ENST00000409096 ST18O60284 1047 aa5.55□□□□□ -1.52
CUL3-203ENST00000409096 PROCA1Q8NCQ7 364 aaPredicted RBP5.55□□□□□ -1.52
CUL3-203ENST00000409096 FBXO31Q5XUX0 539 aaPredicted RBP5.55□□□□□ -1.52
CUL3-203ENST00000409096 TATDN2Q93075 761 aa5.55□□□□□ -1.52
CUL3-203ENST00000409096 DMRTA1Q5VZB9 504 aa5.54□□□□□ -1.52
CUL3-203ENST00000409096 ZBED2Q9BTP6 218 aa5.54□□□□□ -1.52
CUL3-203ENST00000409096 SEPT9Q9UHD8 586 aaPredicted RBP5.54□□□□□ -1.52
CUL3-203ENST00000409096 SH3D19Q5HYK7 790 aa5.54□□□□□ -1.52
CUL3-203ENST00000409096 MYSM1Q5VVJ2 828 aa5.54□□□□□ -1.52
CUL3-203ENST00000409096 GOPCQ9HD26 462 aa5.53□□□□□ -1.52
CUL3-203ENST00000409096 KIAA1468Q9P260 1216 aa5.53□□□□□ -1.52
CUL3-203ENST00000409096 DAXXQ9UER7 740 aaPredicted RBP5.53□□□□□ -1.52
CUL3-203ENST00000409096 ERBB3P21860 1342 aa5.53□□□□□ -1.52
CUL3-203ENST00000409096 POTEB3A0JP26 581 aa5.53□□□□□ -1.52
CUL3-203ENST00000409096 DDX11L8A8MPP1 907 aa5.53□□□□□ -1.52
CUL3-203ENST00000409096 POTEBQ6S5H4 581 aa5.53□□□□□ -1.52
CUL3-203ENST00000409096 NBPF26B4DH59 902 aa5.52□□□□□ -1.53
CUL3-203ENST00000409096 ONECUT3O60422 494 aaPredicted RBP5.52□□□□□ -1.53
CUL3-203ENST00000409096 TMEM134Q9H6X4 195 aa5.52□□□□□ -1.53
CUL3-203ENST00000409096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.52□□□□□ -1.53
CUL3-203ENST00000409096 FAM205CA6NFA0 338 aa5.52□□□□□ -1.53
CUL3-203ENST00000409096 EMP3P54852 163 aa5.52□□□□□ -1.53
CUL3-203ENST00000409096 TBC1D2Q9BYX2 928 aa5.52□□□□□ -1.53
CUL3-203ENST00000409096 DNAJB2P25686 324 aa5.51□□□□□ -1.53
CUL3-203ENST00000409096 PCMTD1Q96MG8 357 aaPredicted RBP5.51□□□□□ -1.53
CUL3-203ENST00000409096 LIMD1Q9UGP4 676 aa5.51□□□□□ -1.53
CUL3-203ENST00000409096 CD46P15529 392 aa5.51□□□□□ -1.53
CUL3-203ENST00000409096 SKIV2LQ15477 1246 aaKnown RBP5.51□□□□□ -1.53
CUL3-203ENST00000409096 PACS2Q86VP3 889 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms