RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 AFAP1Q8N556 730 aa6.16□□□□□ -1.42
PCDH11X-207ENST00000406881 EID1Q9Y6B2 187 aa6.16□□□□□ -1.42
PCDH11X-207ENST00000406881 CNTLNQ9NXG0 1405 aa6.16□□□□□ -1.42
PCDH11X-207ENST00000406881 U2SURPO15042 1029 aaKnown RBP6.16□□□□□ -1.42
PCDH11X-207ENST00000406881 PPM1GO15355 546 aaPredicted RBP6.16□□□□□ -1.42
PCDH11X-207ENST00000406881 FAM69CQ0P6D2 419 aa6.16□□□□□ -1.42
PCDH11X-207ENST00000406881 NGEFQ8N5V2 710 aa6.15□□□□□ -1.42
PCDH11X-207ENST00000406881 RAPGEF6Q8TEU7 1601 aa6.15□□□□□ -1.42
PCDH11X-207ENST00000406881 KIF7Q2M1P5 1343 aa6.15□□□□□ -1.42
PCDH11X-207ENST00000406881 EVC2Q86UK5 1308 aa6.15□□□□□ -1.42
PCDH11X-207ENST00000406881 TNNT2P45379 298 aaPredicted RBP6.15□□□□□ -1.42
PCDH11X-207ENST00000406881 CALD1Q05682 793 aaKnown RBP6.15□□□□□ -1.42
PCDH11X-207ENST00000406881 ARHGEF11O15085 1522 aa6.15□□□□□ -1.43
PCDH11X-207ENST00000406881 PANK3Q9H999 370 aa6.15□□□□□ -1.43
PCDH11X-207ENST00000406881 ABCA5Q8WWZ7 1642 aa6.15□□□□□ -1.43
PCDH11X-207ENST00000406881 FTSJ3Q8IY81 847 aaKnown RBP6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 DDRGK1Q96HY6 314 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 NCOA1Q15788 1441 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 WASHC2AQ641Q2 1341 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 SAFB2Q14151 953 aaKnown RBP eCLIP6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 NEUROD2Q15784 382 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 TRAK1Q9UPV9 953 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 SCAPERQ9BY12 1400 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 KIF21AQ7Z4S6 1674 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 CFAP43Q8NDM7 1665 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 ANKRD30BQ9BXX2 1392 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 ZBED9Q6R2W3 1325 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 RCAN3Q9UKA8 241 aa6.14□□□□□ -1.43
PCDH11X-207ENST00000406881 TCOF1Q13428 1488 aaKnown RBP6.13□□□□□ -1.43
PCDH11X-207ENST00000406881 KIAA0556O60303 1618 aa6.13□□□□□ -1.43
PCDH11X-207ENST00000406881 GPATCH8Q9UKJ3 1502 aaKnown RBP6.13□□□□□ -1.43
PCDH11X-207ENST00000406881 NUP153P49790 1475 aaKnown RBP6.13□□□□□ -1.43
PCDH11X-207ENST00000406881 NUP160Q12769 1436 aa6.13□□□□□ -1.43
PCDH11X-207ENST00000406881 CENPJQ9HC77 1338 aaPredicted RBP6.13□□□□□ -1.43
PCDH11X-207ENST00000406881 CGNL1Q0VF96 1302 aa6.12□□□□□ -1.43
PCDH11X-207ENST00000406881 RPGRIP1LQ68CZ1 1315 aa6.12□□□□□ -1.43
PCDH11X-207ENST00000406881 U2AF1L5P0DN76 240 aaPredicted RBP6.12□□□□□ -1.43
PCDH11X-207ENST00000406881 U2AF1Q01081 240 aaKnown RBP eCLIP6.12□□□□□ -1.43
PCDH11X-207ENST00000406881 GOLGA2Q08379 1002 aa6.12□□□□□ -1.43
PCDH11X-207ENST00000406881 ATP10BO94823 1461 aa6.12□□□□□ -1.43
PCDH11X-207ENST00000406881 SLC52A1Q9NWF4 448 aa6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 EIF4G3O43432 1585 aaKnown RBP6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 IPO8O15397 1037 aaKnown RBP6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 NBPF8Q3BBV2 869 aa6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 ITSN2Q9NZM3 1697 aa6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 BRD4O60885 1362 aaPredicted RBP6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 HSP90AA1P07900 732 aaKnown RBP6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 BECN1Q14457 450 aa6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 CHMP4AQ9BY43 222 aa6.11□□□□□ -1.43
PCDH11X-207ENST00000406881 ZBTB7CA1YPR0 619 aa6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 FRAT1Q92837 279 aaPredicted RBP6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 ANP32EQ9BTT0 268 aa6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 SAMD9Q5K651 1589 aa6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 SENP3-EIF4A1A0A087X0R7 540 aa6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 LMOD3Q0VAK6 560 aa6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 LAS1LQ9Y4W2 734 aaKnown RBP6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 CD109Q6YHK3 1445 aa6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 B4GALNT3Q6L9W6 998 aa6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 RPRD2Q5VT52 1461 aaKnown RBP6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 PBRM1Q86U86 1689 aa6.1□□□□□ -1.43
PCDH11X-207ENST00000406881 TARBP1Q13395 1621 aaKnown RBP6.09□□□□□ -1.43
PCDH11X-207ENST00000406881 PLCH2O75038 1416 aa6.09□□□□□ -1.43
PCDH11X-207ENST00000406881 ADGRL1O94910 1474 aa6.09□□□□□ -1.43
PCDH11X-207ENST00000406881 NUTM2DQ5VT03 806 aaPredicted RBP6.09□□□□□ -1.44
PCDH11X-207ENST00000406881 RTF1Q92541 710 aaKnown RBP6.08□□□□□ -1.44
PCDH11X-207ENST00000406881 DISP1Q96F81 1524 aa6.08□□□□□ -1.44
PCDH11X-207ENST00000406881 CFAP44Q96MT7 982 aa6.08□□□□□ -1.44
PCDH11X-207ENST00000406881 PTPRKQ15262 1439 aa6.08□□□□□ -1.44
PCDH11X-207ENST00000406881 SHANK2Q9UPX8 1470 aa6.08□□□□□ -1.44
PCDH11X-207ENST00000406881 LMOD2Q6P5Q4 547 aa6.07□□□□□ -1.44
PCDH11X-207ENST00000406881 E9PSI1 815 aa6.07□□□□□ -1.44
PCDH11X-207ENST00000406881 TCERG1O14776 1098 aaKnown RBP6.07□□□□□ -1.44
PCDH11X-207ENST00000406881 CFAP70Q5T0N1 1121 aa6.07□□□□□ -1.44
PCDH11X-207ENST00000406881 CASC1Q6TDU7 716 aa6.07□□□□□ -1.44
PCDH11X-207ENST00000406881 NGDNQ8NEJ9 315 aaKnown RBP6.07□□□□□ -1.44
PCDH11X-207ENST00000406881 FANCAO15360 1455 aa6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 MINK1Q8N4C8 1332 aaPredicted RBP6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 PPP6R1Q9UPN7 881 aa6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 ERBINQ96RT1 1412 aa6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 DHX29Q7Z478 1369 aaKnown RBP6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 COG3Q96JB2 828 aa6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 MAPKBP1O60336 1514 aa6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 DUOX2Q9NRD8 1548 aa6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 RWDD1Q9H446 243 aaPredicted RBP6.06□□□□□ -1.44
PCDH11X-207ENST00000406881 PMFBP1Q8TBY8 1022 aa6.05□□□□□ -1.44
PCDH11X-207ENST00000406881 DENND4BO75064 1496 aaPredicted RBP6.05□□□□□ -1.44
PCDH11X-207ENST00000406881 RAPGEF3O95398 923 aa6.05□□□□□ -1.44
PCDH11X-207ENST00000406881 ABCC2Q92887 1545 aa6.05□□□□□ -1.44
PCDH11X-207ENST00000406881 POGZQ7Z3K3 1410 aa6.04□□□□□ -1.44
PCDH11X-207ENST00000406881 RGS3P49796 1198 aa6.04□□□□□ -1.44
PCDH11X-207ENST00000406881 CCDC146Q8IYE0 955 aa6.04□□□□□ -1.44
PCDH11X-207ENST00000406881 WDR7Q9Y4E6 1490 aa6.04□□□□□ -1.44
PCDH11X-207ENST00000406881 PLEKHG5O94827 1062 aa6.04□□□□□ -1.44
PCDH11X-207ENST00000406881 RUNDC1Q96C34 613 aa6.04□□□□□ -1.44
PCDH11X-207ENST00000406881 ADGRL2O95490 1459 aa6.03□□□□□ -1.44
PCDH11X-207ENST00000406881 SOX12O15370 315 aa6.03□□□□□ -1.44
PCDH11X-207ENST00000406881 DIAPH1O60610 1272 aaKnown RBP6.03□□□□□ -1.44
PCDH11X-207ENST00000406881 PAK3O75914 559 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms