RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 TRAK1Q9UPV9 953 aa18.28■□□□□ 0.52
PCNX4-203ENST00000406854 E9PSI1 815 aa18.28■□□□□ 0.52
PCNX4-203ENST00000406854 CCDC7Q96M83 1385 aa18.27■□□□□ 0.52
PCNX4-203ENST00000406854 BCL2L13Q9BXK5 485 aa18.27■□□□□ 0.52
PCNX4-203ENST00000406854 CGNL1Q0VF96 1302 aa18.27■□□□□ 0.51
PCNX4-203ENST00000406854 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.51
PCNX4-203ENST00000406854 DRC7Q8IY82 874 aa18.26■□□□□ 0.51
PCNX4-203ENST00000406854 KIF21BO75037 1637 aa18.26■□□□□ 0.51
PCNX4-203ENST00000406854 APAF1O14727 1248 aa18.26■□□□□ 0.51
PCNX4-203ENST00000406854 KIAA2012Q0VF49 1180 aa18.26■□□□□ 0.51
PCNX4-203ENST00000406854 FGD6Q6ZV73 1430 aa18.26■□□□□ 0.51
PCNX4-203ENST00000406854 GSE1Q14687 1217 aa18.25■□□□□ 0.51
PCNX4-203ENST00000406854 STK31Q9BXU1 1019 aa18.25■□□□□ 0.51
PCNX4-203ENST00000406854 HMMRO75330 724 aa18.25■□□□□ 0.51
PCNX4-203ENST00000406854 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
PCNX4-203ENST00000406854 COG6Q9Y2V7 657 aa18.25■□□□□ 0.51
PCNX4-203ENST00000406854 SYAP1Q96A49 352 aaPredicted RBP18.24■□□□□ 0.51
PCNX4-203ENST00000406854 FOXD4L1Q9NU39 408 aa18.23■□□□□ 0.51
PCNX4-203ENST00000406854 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
PCNX4-203ENST00000406854 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
PCNX4-203ENST00000406854 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.51
PCNX4-203ENST00000406854 ZKSCAN2Q63HK3 967 aa18.2■□□□□ 0.5
PCNX4-203ENST00000406854 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
PCNX4-203ENST00000406854 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
PCNX4-203ENST00000406854 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
PCNX4-203ENST00000406854 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
PCNX4-203ENST00000406854 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
PCNX4-203ENST00000406854 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
PCNX4-203ENST00000406854 CNTLNQ9NXG0 1405 aa18.19■□□□□ 0.5
PCNX4-203ENST00000406854 LRRC9Q6ZRR7 1453 aa18.19■□□□□ 0.5
PCNX4-203ENST00000406854 DDX11L8A8MPP1 907 aa18.17■□□□□ 0.5
PCNX4-203ENST00000406854 NGEFQ8N5V2 710 aa18.17■□□□□ 0.5
PCNX4-203ENST00000406854 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
PCNX4-203ENST00000406854 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
PCNX4-203ENST00000406854 ST18O60284 1047 aa18.17■□□□□ 0.5
PCNX4-203ENST00000406854 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
PCNX4-203ENST00000406854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.16■□□□□ 0.5
PCNX4-203ENST00000406854 ANKRD45Q5TZF3 282 aa18.15■□□□□ 0.5
PCNX4-203ENST00000406854 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
PCNX4-203ENST00000406854 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
PCNX4-203ENST00000406854 HTATSF1O43719 755 aaKnown RBP18.13■□□□□ 0.49
PCNX4-203ENST00000406854 RRBP1Q9P2E9 1410 aaKnown RBP18.13■□□□□ 0.49
PCNX4-203ENST00000406854 HDAC5Q9UQL6 1122 aa18.12■□□□□ 0.49
PCNX4-203ENST00000406854 DDX49Q9Y6V7 483 aaKnown RBP18.12■□□□□ 0.49
PCNX4-203ENST00000406854 ARID3AQ99856 593 aa18.11■□□□□ 0.49
PCNX4-203ENST00000406854 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
PCNX4-203ENST00000406854 GNL2Q13823 731 aaKnown RBP18.1■□□□□ 0.49
PCNX4-203ENST00000406854 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
PCNX4-203ENST00000406854 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
PCNX4-203ENST00000406854 DDX19BQ9UMR2 479 aa18.09■□□□□ 0.49
PCNX4-203ENST00000406854 PTPRGP23470 1445 aa18.09■□□□□ 0.49
PCNX4-203ENST00000406854 NPHP1O15259 732 aa18.09■□□□□ 0.49
PCNX4-203ENST00000406854 GPATCH3Q96I76 525 aa18.08■□□□□ 0.49
PCNX4-203ENST00000406854 FOXD4L5Q5VV16 416 aaPredicted RBP18.08■□□□□ 0.48
PCNX4-203ENST00000406854 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.48
PCNX4-203ENST00000406854 FOXD4L4Q8WXT5 416 aaPredicted RBP18.08■□□□□ 0.48
PCNX4-203ENST00000406854 BRD4O60885 1362 aaPredicted RBP18.07■□□□□ 0.48
PCNX4-203ENST00000406854 SKOR2Q2VWA4 1001 aaPredicted RBP18.07■□□□□ 0.48
PCNX4-203ENST00000406854 AMPHP49418 695 aa18.07■□□□□ 0.48
PCNX4-203ENST00000406854 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
PCNX4-203ENST00000406854 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
PCNX4-203ENST00000406854 TULP1O00294 542 aaPredicted RBP18.06■□□□□ 0.48
PCNX4-203ENST00000406854 CSPP1Q1MSJ5 1256 aa18.06■□□□□ 0.48
PCNX4-203ENST00000406854 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
PCNX4-203ENST00000406854 CUX1P39880 1505 aa18.06■□□□□ 0.48
PCNX4-203ENST00000406854 RAD54L2Q9Y4B4 1467 aa18.06■□□□□ 0.48
PCNX4-203ENST00000406854 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
PCNX4-203ENST00000406854 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
PCNX4-203ENST00000406854 CHMP5Q9NZZ3 219 aa18.05■□□□□ 0.48
PCNX4-203ENST00000406854 PHF14O94880 888 aa18.05■□□□□ 0.48
PCNX4-203ENST00000406854 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
PCNX4-203ENST00000406854 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
PCNX4-203ENST00000406854 ADAMTS8Q9UP79 889 aa18.04■□□□□ 0.48
PCNX4-203ENST00000406854 MIA2Q96PC5 1412 aa18.04■□□□□ 0.48
PCNX4-203ENST00000406854 ANKRD50Q9ULJ7 1429 aa18.04■□□□□ 0.48
PCNX4-203ENST00000406854 RUNDC1Q96C34 613 aa18.03■□□□□ 0.48
PCNX4-203ENST00000406854 NFKBIBQ15653 356 aa18.03■□□□□ 0.48
PCNX4-203ENST00000406854 CSB-PGBD3P0DP91 1061 aa18.02■□□□□ 0.48
PCNX4-203ENST00000406854 RILPL2Q969X0 211 aa18.02■□□□□ 0.48
PCNX4-203ENST00000406854 STAC3Q96MF2 364 aa18.02■□□□□ 0.48
PCNX4-203ENST00000406854 KIF16BQ96L93 1317 aa18.02■□□□□ 0.48
PCNX4-203ENST00000406854 LTV1Q96GA3 475 aaPredicted RBP18.01■□□□□ 0.47
PCNX4-203ENST00000406854 ZNF330Q9Y3S2 320 aaPredicted RBP18.01■□□□□ 0.47
PCNX4-203ENST00000406854 RIPK4P57078 832 aa18.01■□□□□ 0.47
PCNX4-203ENST00000406854 HSP90AA2PQ14568 343 aaPredicted RBP18.01■□□□□ 0.47
PCNX4-203ENST00000406854 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
PCNX4-203ENST00000406854 DIAPH1O60610 1272 aaKnown RBP18.01■□□□□ 0.47
PCNX4-203ENST00000406854 GORABQ5T7V8 394 aa18.01■□□□□ 0.47
PCNX4-203ENST00000406854 COG3Q96JB2 828 aa18.01■□□□□ 0.47
PCNX4-203ENST00000406854 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
PCNX4-203ENST00000406854 FYCO1Q9BQS8 1478 aa18■□□□□ 0.47
PCNX4-203ENST00000406854 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
PCNX4-203ENST00000406854 PANK1Q8TE04 598 aa17.99■□□□□ 0.47
PCNX4-203ENST00000406854 CHMP3Q9Y3E7 222 aa17.99■□□□□ 0.47
PCNX4-203ENST00000406854 REC8O95072 547 aa17.98■□□□□ 0.47
PCNX4-203ENST00000406854 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
PCNX4-203ENST00000406854 AAMPQ13685 434 aa17.98■□□□□ 0.47
PCNX4-203ENST00000406854 API5Q9BZZ5 524 aaKnown RBP17.98■□□□□ 0.47
PCNX4-203ENST00000406854 FOXD4L6Q3SYB3 417 aaPredicted RBP17.98■□□□□ 0.47
PCNX4-203ENST00000406854 FOXD4L3Q6VB84 417 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms