RNA–Protein interactions for RNA: ENST00000406076.5

CLHC1-203, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLHC1, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-203ENST00000406076 IGSF3O75054 1194 aa7.92□□□□□ -1.14
CLHC1-203ENST00000406076 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLHC1-203ENST00000406076 WDR62O43379 1518 aa7.91□□□□□ -1.14
CLHC1-203ENST00000406076 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
CLHC1-203ENST00000406076 ZNF316A6NFI3 1004 aaPredicted RBP7.89□□□□□ -1.15
CLHC1-203ENST00000406076 SLC34A2O95436 690 aa7.89□□□□□ -1.15
CLHC1-203ENST00000406076 PDIA4P13667 645 aaKnown RBP7.89□□□□□ -1.15
CLHC1-203ENST00000406076 NKX1-1Q15270 411 aaPredicted RBP7.89□□□□□ -1.15
CLHC1-203ENST00000406076 PDS5BQ9NTI5 1447 aa7.89□□□□□ -1.15
CLHC1-203ENST00000406076 MRC2Q9UBG0 1479 aa7.89□□□□□ -1.15
CLHC1-203ENST00000406076 NUDT7P0C024 238 aa7.88□□□□□ -1.15
CLHC1-203ENST00000406076 PCDHGA4Q9Y5G9 962 aa7.87□□□□□ -1.15
CLHC1-203ENST00000406076 ARAP1Q96P48 1450 aa7.86□□□□□ -1.15
CLHC1-203ENST00000406076 GPHNQ9NQX3 736 aaPredicted RBP7.84□□□□□ -1.15
CLHC1-203ENST00000406076 SMARCA4P51532 1647 aa7.84□□□□□ -1.15
CLHC1-203ENST00000406076 FOXK1P85037 733 aa7.84□□□□□ -1.15
CLHC1-203ENST00000406076 LHX6Q9UPM6 363 aa7.84□□□□□ -1.15
CLHC1-203ENST00000406076 BAZ1BQ9UIG0 1483 aaKnown RBP7.83□□□□□ -1.16
CLHC1-203ENST00000406076 ARID3CA6NKF2 412 aa7.82□□□□□ -1.16
CLHC1-203ENST00000406076 PLPP6Q8IY26 295 aa7.82□□□□□ -1.16
CLHC1-203ENST00000406076 SLC24A3Q9HC58 644 aa7.82□□□□□ -1.16
CLHC1-203ENST00000406076 DSG2Q14126 1118 aa7.82□□□□□ -1.16
CLHC1-203ENST00000406076 CADPSQ9ULU8 1353 aa7.81□□□□□ -1.16
CLHC1-203ENST00000406076 ANKRD13DQ6ZTN6 518 aa7.81□□□□□ -1.16
CLHC1-203ENST00000406076 RYDENQ9NUL5 291 aaKnown RBP7.81□□□□□ -1.16
CLHC1-203ENST00000406076 PTCD2Q8WV60 388 aaKnown RBP7.8□□□□□ -1.16
CLHC1-203ENST00000406076 GTPBP6O43824 516 aaPredicted RBP7.79□□□□□ -1.16
CLHC1-203ENST00000406076 ZC3H15Q8WU90 426 aaKnown RBP7.79□□□□□ -1.16
CLHC1-203ENST00000406076 KDM4FA0A1W2PPD8 638 aa7.79□□□□□ -1.16
CLHC1-203ENST00000406076 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
CLHC1-203ENST00000406076 RNF166Q96A37 237 aaPredicted RBP7.79□□□□□ -1.16
CLHC1-203ENST00000406076 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
CLHC1-203ENST00000406076 POTEEQ6S8J3 1075 aa7.78□□□□□ -1.16
CLHC1-203ENST00000406076 AXIN2Q9Y2T1 843 aa7.78□□□□□ -1.16
CLHC1-203ENST00000406076 ZNF608Q9ULD9 1512 aaPredicted RBP7.78□□□□□ -1.16
CLHC1-203ENST00000406076 CDK11BP21127 795 aaKnown RBP7.77□□□□□ -1.17
CLHC1-203ENST00000406076 CDK11AQ9UQ88 783 aaPredicted RBP7.77□□□□□ -1.17
CLHC1-203ENST00000406076 APBB1O00213 710 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 PBX2P40425 430 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 KCTD17Q8N5Z5 321 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 URB2Q14146 1524 aaKnown RBP7.76□□□□□ -1.17
CLHC1-203ENST00000406076 P3H3Q8IVL6 736 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 CRISPLD2Q9H0B8 497 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 PEG3Q9GZU2 1588 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 PTGER2P43116 358 aa7.74□□□□□ -1.17
CLHC1-203ENST00000406076 PSDA5PKW4 1024 aaPredicted RBP7.74□□□□□ -1.17
CLHC1-203ENST00000406076 RAD21O60216 631 aa7.74□□□□□ -1.17
CLHC1-203ENST00000406076 TBC1D12O60347 775 aa7.74□□□□□ -1.17
CLHC1-203ENST00000406076 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
CLHC1-203ENST00000406076 HMGB1P09429 215 aaKnown RBP7.73□□□□□ -1.17
CLHC1-203ENST00000406076 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
CLHC1-203ENST00000406076 CEP164Q9UPV0 1460 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 PPP1R15BQ5SWA1 713 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 RGS22Q8NE09 1264 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 KCNV2Q8TDN2 545 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 UPF1Q92900 1129 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLHC1-203ENST00000406076 FANCD2Q9BXW9 1451 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 OXER1Q8TDS5 423 aa7.71□□□□□ -1.17
CLHC1-203ENST00000406076 CHMP4AQ9BY43 222 aa7.71□□□□□ -1.17
CLHC1-203ENST00000406076 ARHGAP33O14559 1287 aa7.71□□□□□ -1.18
CLHC1-203ENST00000406076 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
CLHC1-203ENST00000406076 PDE4AP27815 886 aa7.7□□□□□ -1.18
CLHC1-203ENST00000406076 PPP4R3BQ5MIZ7 849 aa7.69□□□□□ -1.18
CLHC1-203ENST00000406076 PSEN2P49810 448 aa7.69□□□□□ -1.18
CLHC1-203ENST00000406076 ZNF428Q96B54 188 aa7.69□□□□□ -1.18
CLHC1-203ENST00000406076 MTMR7Q9Y216 660 aa7.69□□□□□ -1.18
CLHC1-203ENST00000406076 ADGRD1Q6QNK2 874 aa7.68□□□□□ -1.18
CLHC1-203ENST00000406076 LARP6Q9BRS8 491 aaKnown RBP7.68□□□□□ -1.18
CLHC1-203ENST00000406076 DMRTA1Q5VZB9 504 aa7.67□□□□□ -1.18
CLHC1-203ENST00000406076 IL27Q8NEV9 243 aa7.67□□□□□ -1.18
CLHC1-203ENST00000406076 PUS7Q96PZ0 661 aaKnown RBP7.67□□□□□ -1.18
CLHC1-203ENST00000406076 CHD1O14646 1710 aa7.67□□□□□ -1.18
CLHC1-203ENST00000406076 DDX27Q96GQ7 796 aaKnown RBP7.66□□□□□ -1.18
CLHC1-203ENST00000406076 GPBP1L1Q9HC44 474 aaPredicted RBP7.66□□□□□ -1.18
CLHC1-203ENST00000406076 CCDC82Q8N4S0 544 aa7.65□□□□□ -1.18
CLHC1-203ENST00000406076 RSF1Q96T23 1441 aaPredicted RBP7.65□□□□□ -1.19
CLHC1-203ENST00000406076 ZNF454Q8N9F8 522 aa7.64□□□□□ -1.19
CLHC1-203ENST00000406076 FOXD4L5Q5VV16 416 aaPredicted RBP7.64□□□□□ -1.19
CLHC1-203ENST00000406076 CADPS2Q86UW7 1296 aa7.64□□□□□ -1.19
CLHC1-203ENST00000406076 FOXD4L4Q8WXT5 416 aaPredicted RBP7.64□□□□□ -1.19
CLHC1-203ENST00000406076 KCNK17Q96T54 332 aa7.64□□□□□ -1.19
CLHC1-203ENST00000406076 TK2O00142 265 aa7.63□□□□□ -1.19
CLHC1-203ENST00000406076 RBM25P49756 843 aaKnown RBP7.63□□□□□ -1.19
CLHC1-203ENST00000406076 MFSD10Q14728 455 aa7.63□□□□□ -1.19
CLHC1-203ENST00000406076 CFTRP13569 1480 aa7.62□□□□□ -1.19
CLHC1-203ENST00000406076 AQRO60306 1485 aaKnown RBP eCLIP7.62□□□□□ -1.19
CLHC1-203ENST00000406076 HRO43593 1189 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 EVI5O60447 810 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 ZMYND10O75800 440 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 AEBP1Q8IUX7 1158 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 TRAIPQ9BWF2 469 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 FOSBP53539 338 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 KCNH8Q96L42 1107 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 ANO8Q9HCE9 1232 aaPredicted RBP7.61□□□□□ -1.19
CLHC1-203ENST00000406076 EIF4G3O43432 1585 aaKnown RBP7.61□□□□□ -1.19
CLHC1-203ENST00000406076 EMILIN3Q9NT22 766 aa7.6□□□□□ -1.19
CLHC1-203ENST00000406076 IFT140Q96RY7 1462 aa7.59□□□□□ -1.19
CLHC1-203ENST00000406076 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
CLHC1-203ENST00000406076 BCL2L12Q9HB09 334 aa7.59□□□□□ -1.19
CLHC1-203ENST00000406076 JPH4Q96JJ6 628 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms