RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 PKD2Q13563 968 aa20.73■□□□□ 0.91
ATG4B-205ENST00000404914 BACH2Q9BYV9 841 aa20.73■□□□□ 0.91
ATG4B-205ENST00000404914 RCAN3Q9UKA8 241 aa20.72■□□□□ 0.91
ATG4B-205ENST00000404914 TCERG1O14776 1098 aaKnown RBP20.71■□□□□ 0.91
ATG4B-205ENST00000404914 CDCA7LQ96GN5 454 aa20.71■□□□□ 0.91
ATG4B-205ENST00000404914 KIAA1107Q9UPP5 1409 aa20.7■□□□□ 0.9
ATG4B-205ENST00000404914 PLIN1O60240 522 aa20.7■□□□□ 0.9
ATG4B-205ENST00000404914 UHRF1BP1LA0JNW5 1464 aa20.7■□□□□ 0.9
ATG4B-205ENST00000404914 ZCCHC11Q5TAX3 1644 aaKnown RBP20.7■□□□□ 0.9
ATG4B-205ENST00000404914 KIF15Q9NS87 1388 aa20.69■□□□□ 0.9
ATG4B-205ENST00000404914 ST20-MTHFSA0A0A6YYL1 179 aa20.69■□□□□ 0.9
ATG4B-205ENST00000404914 CARD11Q9BXL7 1154 aa20.68■□□□□ 0.9
ATG4B-205ENST00000404914 MYBBP1AQ9BQG0 1328 aaKnown RBP20.68■□□□□ 0.9
ATG4B-205ENST00000404914 BRD4O60885 1362 aaPredicted RBP20.66■□□□□ 0.9
ATG4B-205ENST00000404914 KDM2AQ9Y2K7 1162 aa20.66■□□□□ 0.9
ATG4B-205ENST00000404914 ARID4BQ4LE39 1312 aaPredicted RBP20.66■□□□□ 0.9
ATG4B-205ENST00000404914 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
ATG4B-205ENST00000404914 RALGAPBQ86X10 1494 aa20.64■□□□□ 0.89
ATG4B-205ENST00000404914 ROCK2O75116 1388 aaKnown RBP20.64■□□□□ 0.89
ATG4B-205ENST00000404914 CAMSAP2Q08AD1 1489 aa20.63■□□□□ 0.89
ATG4B-205ENST00000404914 DNAJC5Q9H3Z4 198 aa20.63■□□□□ 0.89
ATG4B-205ENST00000404914 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.63■□□□□ 0.89
ATG4B-205ENST00000404914 SLC4A3P48751 1232 aa20.61■□□□□ 0.89
ATG4B-205ENST00000404914 UHRF1BP1Q6BDS2 1440 aa20.61■□□□□ 0.89
ATG4B-205ENST00000404914 WASHC2CQ9Y4E1 1318 aa20.6■□□□□ 0.89
ATG4B-205ENST00000404914 E9PCH4 1651 aa20.6■□□□□ 0.89
ATG4B-205ENST00000404914 MS4A1P11836 297 aa20.59■□□□□ 0.89
ATG4B-205ENST00000404914 RALBP1Q15311 655 aa20.59■□□□□ 0.89
ATG4B-205ENST00000404914 CRBNQ96SW2 442 aa20.59■□□□□ 0.89
ATG4B-205ENST00000404914 CFDP1Q9UEE9 299 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-205ENST00000404914 BRPF3Q9ULD4 1205 aa20.59■□□□□ 0.89
ATG4B-205ENST00000404914 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
ATG4B-205ENST00000404914 USP35Q9P2H5 1018 aa20.57■□□□□ 0.88
ATG4B-205ENST00000404914 ADGBQ8N7X0 1667 aa20.57■□□□□ 0.88
ATG4B-205ENST00000404914 TROQ12816 1431 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-205ENST00000404914 C20orf194Q5TEA3 1177 aa20.56■□□□□ 0.88
ATG4B-205ENST00000404914 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
ATG4B-205ENST00000404914 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
ATG4B-205ENST00000404914 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
ATG4B-205ENST00000404914 PARD3Q8TEW0 1356 aa20.53■□□□□ 0.88
ATG4B-205ENST00000404914 ASXL2Q76L83 1435 aa20.53■□□□□ 0.88
ATG4B-205ENST00000404914 ANKRD50Q9ULJ7 1429 aa20.53■□□□□ 0.88
ATG4B-205ENST00000404914 GPATCH8Q9UKJ3 1502 aaKnown RBP20.53■□□□□ 0.88
ATG4B-205ENST00000404914 NUP155O75694 1391 aa20.52■□□□□ 0.88
ATG4B-205ENST00000404914 NPM1P06748 294 aaKnown RBP eCLIP20.52■□□□□ 0.87
ATG4B-205ENST00000404914 ADGRL2O95490 1459 aa20.51■□□□□ 0.87
ATG4B-205ENST00000404914 CROCC2H7BZ55 1655 aa20.51■□□□□ 0.87
ATG4B-205ENST00000404914 NFKBIBQ15653 356 aa20.5■□□□□ 0.87
ATG4B-205ENST00000404914 PER1O15534 1290 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-205ENST00000404914 PDE3BQ13370 1112 aa20.5■□□□□ 0.87
ATG4B-205ENST00000404914 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
ATG4B-205ENST00000404914 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
ATG4B-205ENST00000404914 WDR7Q9Y4E6 1490 aa20.49■□□□□ 0.87
ATG4B-205ENST00000404914 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
ATG4B-205ENST00000404914 ARHGEF12Q9NZN5 1544 aa20.47■□□□□ 0.87
ATG4B-205ENST00000404914 TTC37Q6PGP7 1564 aa20.47■□□□□ 0.87
ATG4B-205ENST00000404914 GSE1Q14687 1217 aa20.46■□□□□ 0.87
ATG4B-205ENST00000404914 NBPF1Q3BBV0 1214 aa20.46■□□□□ 0.87
ATG4B-205ENST00000404914 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.46■□□□□ 0.87
ATG4B-205ENST00000404914 FRAT1Q92837 279 aaPredicted RBP20.45■□□□□ 0.86
ATG4B-205ENST00000404914 ABCC10Q5T3U5 1492 aa20.45■□□□□ 0.86
ATG4B-205ENST00000404914 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
ATG4B-205ENST00000404914 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
ATG4B-205ENST00000404914 CDC42BPAQ5VT25 1732 aa20.43■□□□□ 0.86
ATG4B-205ENST00000404914 DDRGK1Q96HY6 314 aa20.42■□□□□ 0.86
ATG4B-205ENST00000404914 BLMP54132 1417 aaPredicted RBP20.42■□□□□ 0.86
ATG4B-205ENST00000404914 DISP3Q9P2K9 1392 aa20.41■□□□□ 0.86
ATG4B-205ENST00000404914 SLC24A1O60721 1099 aa20.4■□□□□ 0.86
ATG4B-205ENST00000404914 KDM5DQ9BY66 1539 aa20.39■□□□□ 0.86
ATG4B-205ENST00000404914 RGL3Q3MIN7 710 aa20.39■□□□□ 0.85
ATG4B-205ENST00000404914 C8orf34Q49A92 452 aa20.39■□□□□ 0.85
ATG4B-205ENST00000404914 TRPM1Q7Z4N2 1603 aa20.38■□□□□ 0.85
ATG4B-205ENST00000404914 C9orf84Q5VXU9 1444 aa20.38■□□□□ 0.85
ATG4B-205ENST00000404914 CDC42BPBQ9Y5S2 1711 aa20.38■□□□□ 0.85
ATG4B-205ENST00000404914 PANK3Q9H999 370 aa20.37■□□□□ 0.85
ATG4B-205ENST00000404914 ADAMTS8Q9UP79 889 aa20.36■□□□□ 0.85
ATG4B-205ENST00000404914 FRAT2O75474 233 aaPredicted RBP20.36■□□□□ 0.85
ATG4B-205ENST00000404914 PRAG1Q86YV5 1406 aa20.36■□□□□ 0.85
ATG4B-205ENST00000404914 ZMYM4Q5VZL5 1548 aa20.35■□□□□ 0.85
ATG4B-205ENST00000404914 TESK2Q96S53 571 aa20.35■□□□□ 0.85
ATG4B-205ENST00000404914 PLEKHH1Q9ULM0 1364 aa20.34■□□□□ 0.85
ATG4B-205ENST00000404914 MYO5CQ9NQX4 1742 aa20.34■□□□□ 0.85
ATG4B-205ENST00000404914 ABCA9Q8IUA7 1624 aa20.33■□□□□ 0.85
ATG4B-205ENST00000404914 PREX2Q70Z35 1606 aa20.33■□□□□ 0.84
ATG4B-205ENST00000404914 COL17A1Q9UMD9 1497 aaPredicted RBP20.33■□□□□ 0.84
ATG4B-205ENST00000404914 RGS3P49796 1198 aa20.32■□□□□ 0.84
ATG4B-205ENST00000404914 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.841e-6■■■■□ 21.8
ATG4B-205ENST00000404914 FAM161AQ3B820 660 aa20.31■□□□□ 0.84
ATG4B-205ENST00000404914 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
ATG4B-205ENST00000404914 DIP2BQ9P265 1576 aa20.31■□□□□ 0.84
ATG4B-205ENST00000404914 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
ATG4B-205ENST00000404914 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
ATG4B-205ENST00000404914 FAM69CQ0P6D2 419 aa20.28■□□□□ 0.84
ATG4B-205ENST00000404914 ARHGAP5Q13017 1502 aa20.28■□□□□ 0.84
ATG4B-205ENST00000404914 KIF13AQ9H1H9 1805 aa20.28■□□□□ 0.84
ATG4B-205ENST00000404914 PLCH2O75038 1416 aa20.27■□□□□ 0.84
ATG4B-205ENST00000404914 A2MP01023 1474 aa20.26■□□□□ 0.83
ATG4B-205ENST00000404914 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
ATG4B-205ENST00000404914 SHANK2Q9UPX8 1470 aa20.26■□□□□ 0.83
ATG4B-205ENST00000404914 FAM135AQ9P2D6 1515 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms