RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 DEPDC5O75140 1603 aa26.3■■□□□ 1.8
HDAC11-202ENST00000402259 CNTLNQ9NXG0 1405 aa26.3■■□□□ 1.8
HDAC11-202ENST00000402259 MROH1Q8NDA8 1641 aa26.28■■□□□ 1.8
HDAC11-202ENST00000402259 RIMS1Q86UR5 1692 aaKnown RBP26.28■■□□□ 1.8
HDAC11-202ENST00000402259 HFM1A2PYH4 1435 aa26.28■■□□□ 1.8
HDAC11-202ENST00000402259 GGT6Q6P531 493 aa26.27■■□□□ 1.8
HDAC11-202ENST00000402259 PRDM15P57071 1507 aaPredicted RBP26.27■■□□□ 1.8
HDAC11-202ENST00000402259 MROH2AA6NES4 1674 aa26.26■■□□□ 1.79
HDAC11-202ENST00000402259 NAIPQ13075 1403 aa26.26■■□□□ 1.79
HDAC11-202ENST00000402259 KDM5DQ9BY66 1539 aa26.24■■□□□ 1.79
HDAC11-202ENST00000402259 ZC3H13Q5T200 1668 aaKnown RBP26.24■■□□□ 1.79
HDAC11-202ENST00000402259 ESF1Q9H501 851 aaKnown RBP26.23■■□□□ 1.79
HDAC11-202ENST00000402259 PTPRMP28827 1452 aa26.23■■□□□ 1.79
HDAC11-202ENST00000402259 CLTCQ00610 1675 aaKnown RBP26.22■■□□□ 1.79
HDAC11-202ENST00000402259 UNC13BO14795 1591 aa26.21■■□□□ 1.79
HDAC11-202ENST00000402259 VWDEQ8N2E2 1590 aa26.2■■□□□ 1.78
HDAC11-202ENST00000402259 ABCC3O15438 1527 aa26.18■■□□□ 1.78
HDAC11-202ENST00000402259 KANK1Q14678 1352 aa26.17■■□□□ 1.78
HDAC11-202ENST00000402259 C3P01024 1663 aa26.15■■□□□ 1.78
HDAC11-202ENST00000402259 WASHC2CQ9Y4E1 1318 aa26.15■■□□□ 1.78
HDAC11-202ENST00000402259 LMTK2Q8IWU2 1503 aa26.14■■□□□ 1.78
HDAC11-202ENST00000402259 CEP152O94986 1710 aa26.14■■□□□ 1.77
HDAC11-202ENST00000402259 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
HDAC11-202ENST00000402259 CAMSAP1Q5T5Y3 1602 aa26.1■■□□□ 1.77
HDAC11-202ENST00000402259 IQGAP3Q86VI3 1631 aa26.1■■□□□ 1.77
HDAC11-202ENST00000402259 SETD5Q9C0A6 1442 aa26.09■■□□□ 1.77
HDAC11-202ENST00000402259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.09■■□□□ 1.77
HDAC11-202ENST00000402259 ACIN1Q9UKV3 1341 aaKnown RBP26.09■■□□□ 1.77
HDAC11-202ENST00000402259 ARHGAP31Q2M1Z3 1444 aa26.07■■□□□ 1.76
HDAC11-202ENST00000402259 PZPP20742 1482 aa26.07■■□□□ 1.76
HDAC11-202ENST00000402259 TRIM26Q12899 539 aaPredicted RBP26.07■■□□□ 1.76
HDAC11-202ENST00000402259 NPATQ14207 1427 aa26.06■■□□□ 1.76
HDAC11-202ENST00000402259 TET3O43151 1660 aa26.06■■□□□ 1.76
HDAC11-202ENST00000402259 NUP155O75694 1391 aa26.05■■□□□ 1.76
HDAC11-202ENST00000402259 EFCAB6Q5THR3 1501 aa26.04■■□□□ 1.76
HDAC11-202ENST00000402259 SETD1BQ9UPS6 1966 aaKnown RBP26.04■■□□□ 1.76
HDAC11-202ENST00000402259 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
HDAC11-202ENST00000402259 CEBPAP49715 358 aaPredicted RBP26.03■■□□□ 1.76
HDAC11-202ENST00000402259 RPRD2Q5VT52 1461 aaKnown RBP25.99■■□□□ 1.75
HDAC11-202ENST00000402259 HRCP23327 699 aa25.99■■□□□ 1.75
HDAC11-202ENST00000402259 RAB3GAP2Q9H2M9 1393 aa25.98■■□□□ 1.75
HDAC11-202ENST00000402259 SPATA31D1Q6ZQQ2 1576 aa25.98■■□□□ 1.75
HDAC11-202ENST00000402259 PREX1Q8TCU6 1659 aa25.96■■□□□ 1.75
HDAC11-202ENST00000402259 PLPPR3Q6T4P5 718 aa25.95■■□□□ 1.74
HDAC11-202ENST00000402259 ERVK-7P63135 1459 aa25.95■■□□□ 1.74
HDAC11-202ENST00000402259 E9PCH4 1651 aa25.93■■□□□ 1.74
HDAC11-202ENST00000402259 TRIM52Q96A61 297 aa25.93■■□□□ 1.74
HDAC11-202ENST00000402259 CFAP65Q6ZU64 1925 aaKnown RBP25.91■■□□□ 1.74
HDAC11-202ENST00000402259 FBXO31Q5XUX0 539 aaPredicted RBP25.91■■□□□ 1.74
HDAC11-202ENST00000402259 TNRQ92752 1358 aa25.91■■□□□ 1.74
HDAC11-202ENST00000402259 MYO3AQ8NEV4 1616 aa25.89■■□□□ 1.74
HDAC11-202ENST00000402259 NOS1P29475 1434 aa25.88■■□□□ 1.73
HDAC11-202ENST00000402259 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
HDAC11-202ENST00000402259 ZNF142P52746 1687 aaPredicted RBP25.87■■□□□ 1.73
HDAC11-202ENST00000402259 NLRP1Q9C000 1473 aa25.86■■□□□ 1.73
HDAC11-202ENST00000402259 LMTK3Q96Q04 1460 aa25.85■■□□□ 1.73
HDAC11-202ENST00000402259 SLC4A1APQ9BWU0 796 aaKnown RBP25.84■■□□□ 1.73
HDAC11-202ENST00000402259 SYNMO15061 1565 aa25.83■■□□□ 1.73
HDAC11-202ENST00000402259 CEP170BQ9Y4F5 1589 aaPredicted RBP25.82■■□□□ 1.72
HDAC11-202ENST00000402259 A2ML1A8K2U0 1454 aa25.82■■□□□ 1.72
HDAC11-202ENST00000402259 SPHKAPQ2M3C7 1700 aa25.81■■□□□ 1.72
HDAC11-202ENST00000402259 PTPRTO14522 1441 aa25.8■■□□□ 1.72
HDAC11-202ENST00000402259 MPHOSPH9Q99550 1183 aa25.8■■□□□ 1.72
HDAC11-202ENST00000402259 PKD2Q13563 968 aa25.79■■□□□ 1.72
HDAC11-202ENST00000402259 PIK3C2BO00750 1634 aa25.77■■□□□ 1.72
HDAC11-202ENST00000402259 SLC52A1Q9NWF4 448 aa25.77■■□□□ 1.72
HDAC11-202ENST00000402259 KDM5AP29375 1690 aaKnown RBP25.76■■□□□ 1.71
HDAC11-202ENST00000402259 TRPM2O94759 1503 aa25.75■■□□□ 1.71
HDAC11-202ENST00000402259 UGGT1Q9NYU2 1555 aa25.73■■□□□ 1.71
HDAC11-202ENST00000402259 UBR1Q8IWV7 1749 aa25.71■■□□□ 1.71
HDAC11-202ENST00000402259 PLA2R1Q13018 1463 aa25.71■■□□□ 1.71
HDAC11-202ENST00000402259 IDI1Q13907 227 aa25.7■■□□□ 1.7
HDAC11-202ENST00000402259 ADGRB3O60242 1522 aa25.68■■□□□ 1.7
HDAC11-202ENST00000402259 THEMISQ8N1K5 641 aaPredicted RBP25.66■■□□□ 1.7
HDAC11-202ENST00000402259 PCGF6Q9BYE7 350 aa25.65■■□□□ 1.7
HDAC11-202ENST00000402259 CLTCL1P53675 1640 aa25.65■■□□□ 1.7
HDAC11-202ENST00000402259 TMEM131LA2VDJ0 1609 aa25.64■■□□□ 1.7
HDAC11-202ENST00000402259 HSPA2P54652 639 aa25.64■■□□□ 1.7
HDAC11-202ENST00000402259 FOXD1Q16676 465 aa25.63■■□□□ 1.69
HDAC11-202ENST00000402259 SLIT1O75093 1534 aa25.61■■□□□ 1.69
HDAC11-202ENST00000402259 KIF1BO60333 1816 aa25.6■■□□□ 1.69
HDAC11-202ENST00000402259 ARHGAP23Q9P227 1491 aa25.6■■□□□ 1.69
HDAC11-202ENST00000402259 STAG3Q9UJ98 1225 aa25.6■■□□□ 1.69
HDAC11-202ENST00000402259 MYO5BQ9ULV0 1848 aa25.59■■□□□ 1.69
HDAC11-202ENST00000402259 CCDC144AA2RUR9 1427 aa25.59■■□□□ 1.69
HDAC11-202ENST00000402259 ANKRD30BQ9BXX2 1392 aa25.58■■□□□ 1.69
HDAC11-202ENST00000402259 STRCQ7RTU9 1775 aa25.58■■□□□ 1.69
HDAC11-202ENST00000402259 POLR1AO95602 1720 aaPredicted RBP25.56■■□□□ 1.68
HDAC11-202ENST00000402259 TMEM2Q9UHN6 1383 aa25.56■■□□□ 1.68
HDAC11-202ENST00000402259 NEURL4Q96JN8 1562 aa25.55■■□□□ 1.68
HDAC11-202ENST00000402259 DHX57Q6P158 1386 aaKnown RBP25.54■■□□□ 1.68
HDAC11-202ENST00000402259 ANKLE2Q86XL3 938 aa25.51■■□□□ 1.67
HDAC11-202ENST00000402259 ZFYVE9O95405 1425 aa25.5■■□□□ 1.67
HDAC11-202ENST00000402259 CHGAP10645 457 aaKnown RBP25.5■■□□□ 1.67
HDAC11-202ENST00000402259 MED14O60244 1454 aa25.49■■□□□ 1.67
HDAC11-202ENST00000402259 SCAF11Q99590 1463 aaKnown RBP25.49■■□□□ 1.67
HDAC11-202ENST00000402259 SPATA31E1Q6ZUB1 1445 aa25.47■■□□□ 1.67
HDAC11-202ENST00000402259 RIMS2Q9UQ26 1411 aa25.47■■□□□ 1.67
HDAC11-202ENST00000402259 HDGFP51858 240 aaKnown RBP25.47■■□□□ 1.67
HDAC11-202ENST00000402259 DMRT2Q9Y5R5 561 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms