RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 CDC42BPBQ9Y5S2 1711 aa15.9■□□□□ 0.14
ITSN1-211ENST00000399355 CHD1O14646 1710 aa15.89■□□□□ 0.13
ITSN1-211ENST00000399355 KDM5CP41229 1560 aa15.89■□□□□ 0.13
ITSN1-211ENST00000399355 CHGAP10645 457 aaKnown RBP15.89■□□□□ 0.13
ITSN1-211ENST00000399355 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
ITSN1-211ENST00000399355 CCDC144AA2RUR9 1427 aa15.88■□□□□ 0.13
ITSN1-211ENST00000399355 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
ITSN1-211ENST00000399355 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
ITSN1-211ENST00000399355 PPP4R2Q9NY27 417 aa15.88■□□□□ 0.13
ITSN1-211ENST00000399355 NPM2Q86SE8 214 aaKnown RBP15.88■□□□□ 0.13
ITSN1-211ENST00000399355 CCDC136Q96JN2 1154 aa15.87■□□□□ 0.13
ITSN1-211ENST00000399355 CROCC2H7BZ55 1655 aa15.87■□□□□ 0.13
ITSN1-211ENST00000399355 FAM135AQ9P2D6 1515 aa15.87■□□□□ 0.13
ITSN1-211ENST00000399355 TRAPPC8Q9Y2L5 1435 aa15.87■□□□□ 0.13
ITSN1-211ENST00000399355 CFAP65Q6ZU64 1925 aaKnown RBP15.87■□□□□ 0.13
ITSN1-211ENST00000399355 ADGBQ8N7X0 1667 aa15.86■□□□□ 0.13
ITSN1-211ENST00000399355 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
ITSN1-211ENST00000399355 CCDC146Q8IYE0 955 aa15.86■□□□□ 0.13
ITSN1-211ENST00000399355 NBR1Q14596 966 aa15.86■□□□□ 0.13
ITSN1-211ENST00000399355 ADGRL2O95490 1459 aa15.85■□□□□ 0.13
ITSN1-211ENST00000399355 TESK2Q96S53 571 aa15.84■□□□□ 0.13
ITSN1-211ENST00000399355 NUDCQ9Y266 331 aa15.84■□□□□ 0.13
ITSN1-211ENST00000399355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.84■□□□□ 0.13
ITSN1-211ENST00000399355 KIF3BO15066 747 aa15.83■□□□□ 0.13
ITSN1-211ENST00000399355 C20orf194Q5TEA3 1177 aa15.83■□□□□ 0.12
ITSN1-211ENST00000399355 CCDC141Q6ZP82 1450 aa15.82■□□□□ 0.12
ITSN1-211ENST00000399355 A2MP01023 1474 aa15.82■□□□□ 0.12
ITSN1-211ENST00000399355 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
ITSN1-211ENST00000399355 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.12
ITSN1-211ENST00000399355 CFAP70Q5T0N1 1121 aa15.8■□□□□ 0.12
ITSN1-211ENST00000399355 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
ITSN1-211ENST00000399355 UGGT1Q9NYU2 1555 aa15.79■□□□□ 0.12
ITSN1-211ENST00000399355 RALGAPBQ86X10 1494 aa15.79■□□□□ 0.12
ITSN1-211ENST00000399355 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
ITSN1-211ENST00000399355 PRAG1Q86YV5 1406 aa15.79■□□□□ 0.12
ITSN1-211ENST00000399355 TMEM132EQ6IEE7 984 aa15.77■□□□□ 0.12
ITSN1-211ENST00000399355 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.11
ITSN1-211ENST00000399355 GGT6Q6P531 493 aa15.77■□□□□ 0.11
ITSN1-211ENST00000399355 SPAG9O60271 1321 aaKnown RBP15.76■□□□□ 0.11
ITSN1-211ENST00000399355 KDM5DQ9BY66 1539 aa15.76■□□□□ 0.11
ITSN1-211ENST00000399355 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
ITSN1-211ENST00000399355 SCAPERQ9BY12 1400 aa15.74■□□□□ 0.11
ITSN1-211ENST00000399355 EFCAB2Q5VUJ9 269 aa15.73■□□□□ 0.11
ITSN1-211ENST00000399355 DMRT2Q9Y5R5 561 aa15.73■□□□□ 0.11
ITSN1-211ENST00000399355 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
ITSN1-211ENST00000399355 ADGRF5Q8IZF2 1346 aa15.73■□□□□ 0.11
ITSN1-211ENST00000399355 ERICH6Q7L0X2 663 aa15.72■□□□□ 0.11
ITSN1-211ENST00000399355 RCAN3Q9UKA8 241 aa15.72■□□□□ 0.11
ITSN1-211ENST00000399355 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
ITSN1-211ENST00000399355 PREX2Q70Z35 1606 aa15.71■□□□□ 0.11
ITSN1-211ENST00000399355 UHRF1BP1Q6BDS2 1440 aa15.71■□□□□ 0.11
ITSN1-211ENST00000399355 TRAK1Q9UPV9 953 aa15.71■□□□□ 0.11
ITSN1-211ENST00000399355 RRP7AQ9Y3A4 280 aaKnown RBP15.71■□□□□ 0.11
ITSN1-211ENST00000399355 NLRP13Q86W25 1043 aa15.71■□□□□ 0.1
ITSN1-211ENST00000399355 SMG6Q86US8 1419 aaKnown RBP15.7■□□□□ 0.1
ITSN1-211ENST00000399355 RRP1P56182 461 aaKnown RBP15.7■□□□□ 0.1
ITSN1-211ENST00000399355 RAPGEF3O95398 923 aa15.69■□□□□ 0.1
ITSN1-211ENST00000399355 CRBNQ96SW2 442 aa15.69■□□□□ 0.1
ITSN1-211ENST00000399355 POLR1AO95602 1720 aaPredicted RBP15.68■□□□□ 0.1
ITSN1-211ENST00000399355 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
ITSN1-211ENST00000399355 MAGI2Q86UL8 1455 aa15.68■□□□□ 0.1
ITSN1-211ENST00000399355 TMF1P82094 1093 aa15.67■□□□□ 0.1
ITSN1-211ENST00000399355 ERBINQ96RT1 1412 aa15.67■□□□□ 0.1
ITSN1-211ENST00000399355 SHANK2Q9UPX8 1470 aa15.67■□□□□ 0.1
ITSN1-211ENST00000399355 SLC4A3P48751 1232 aa15.67■□□□□ 0.1
ITSN1-211ENST00000399355 TRPM1Q7Z4N2 1603 aa15.65■□□□□ 0.1
ITSN1-211ENST00000399355 KNSTRNQ9Y448 316 aa15.65■□□□□ 0.1
ITSN1-211ENST00000399355 LRPPRCP42704 1394 aaKnown RBP15.65■□□□□ 0.1
ITSN1-211ENST00000399355 PLEKHH1Q9ULM0 1364 aa15.64■□□□□ 0.09
ITSN1-211ENST00000399355 MYO5CQ9NQX4 1742 aa15.64■□□□□ 0.09
ITSN1-211ENST00000399355 PPP2R1AP30153 589 aa15.64■□□□□ 0.09
ITSN1-211ENST00000399355 RALBP1Q15311 655 aa15.64■□□□□ 0.09
ITSN1-211ENST00000399355 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
ITSN1-211ENST00000399355 CARD14Q9BXL6 1004 aa15.64■□□□□ 0.09
ITSN1-211ENST00000399355 APAF1O14727 1248 aa15.63■□□□□ 0.09
ITSN1-211ENST00000399355 FBLN1P23142 703 aa15.63■□□□□ 0.09
ITSN1-211ENST00000399355 ZCCHC11Q5TAX3 1644 aaKnown RBP15.63■□□□□ 0.09
ITSN1-211ENST00000399355 BCL2L13Q9BXK5 485 aa15.63■□□□□ 0.09
ITSN1-211ENST00000399355 SLC12A5Q9H2X9 1139 aa15.63■□□□□ 0.09
ITSN1-211ENST00000399355 STK26Q9P289 416 aa15.63■□□□□ 0.09
ITSN1-211ENST00000399355 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
ITSN1-211ENST00000399355 PLCH2O75038 1416 aa15.62■□□□□ 0.09
ITSN1-211ENST00000399355 BRD4O60885 1362 aaPredicted RBP15.61■□□□□ 0.09
ITSN1-211ENST00000399355 ARHGEF5Q12774 1597 aa15.61■□□□□ 0.09
ITSN1-211ENST00000399355 BCAR3O75815 825 aa15.61■□□□□ 0.09
ITSN1-211ENST00000399355 AMER1Q5JTC6 1135 aaPredicted RBP15.61■□□□□ 0.09
ITSN1-211ENST00000399355 TNNQ9UQP3 1299 aa15.6■□□□□ 0.09
ITSN1-211ENST00000399355 COL17A1Q9UMD9 1497 aaPredicted RBP15.59■□□□□ 0.09
ITSN1-211ENST00000399355 WDR43Q15061 677 aaKnown RBP eCLIP15.59■□□□□ 0.09
ITSN1-211ENST00000399355 RGS3P49796 1198 aa15.58■□□□□ 0.08
ITSN1-211ENST00000399355 ATP10AO60312 1499 aa15.58■□□□□ 0.08
ITSN1-211ENST00000399355 RNF123Q5XPI4 1314 aa15.57■□□□□ 0.08
ITSN1-211ENST00000399355 RSPH4AQ5TD94 716 aa15.57■□□□□ 0.08
ITSN1-211ENST00000399355 BCL11AQ9H165 835 aa15.57■□□□□ 0.08
ITSN1-211ENST00000399355 E9PCH4 1651 aa15.56■□□□□ 0.08
ITSN1-211ENST00000399355 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
ITSN1-211ENST00000399355 FANCAO15360 1455 aa15.56■□□□□ 0.08
ITSN1-211ENST00000399355 WDR7Q9Y4E6 1490 aa15.55■□□□□ 0.08
ITSN1-211ENST00000399355 PLPPR3Q6T4P5 718 aa15.55■□□□□ 0.08
ITSN1-211ENST00000399355 CLTCL1P53675 1640 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms