RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 PDCL3Q9H2J4 239 aa18.87■□□□□ 0.61
ITSN1-210ENST00000399353 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
ITSN1-210ENST00000399353 CUX1P39880 1505 aa18.85■□□□□ 0.61
ITSN1-210ENST00000399353 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
ITSN1-210ENST00000399353 BRD4O60885 1362 aaPredicted RBP18.84■□□□□ 0.61
ITSN1-210ENST00000399353 CHMP5Q9NZZ3 219 aa18.84■□□□□ 0.61
ITSN1-210ENST00000399353 TPM2P07951 284 aa18.83■□□□□ 0.61
ITSN1-210ENST00000399353 IGHDP01880 384 aa18.83■□□□□ 0.6
ITSN1-210ENST00000399353 PANK3Q9H999 370 aa18.83■□□□□ 0.6
ITSN1-210ENST00000399353 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
ITSN1-210ENST00000399353 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
ITSN1-210ENST00000399353 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
ITSN1-210ENST00000399353 DHX29Q7Z478 1369 aaKnown RBP18.82■□□□□ 0.6
ITSN1-210ENST00000399353 RAD54L2Q9Y4B4 1467 aa18.82■□□□□ 0.6
ITSN1-210ENST00000399353 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
ITSN1-210ENST00000399353 CHGAP10645 457 aaKnown RBP18.81■□□□□ 0.6
ITSN1-210ENST00000399353 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
ITSN1-210ENST00000399353 GOLGA6L22H0YM25 854 aa18.79■□□□□ 0.6
ITSN1-210ENST00000399353 APAF1O14727 1248 aa18.79■□□□□ 0.6
ITSN1-210ENST00000399353 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
ITSN1-210ENST00000399353 MPNDQ8N594 471 aa18.77■□□□□ 0.6
ITSN1-210ENST00000399353 NUP155O75694 1391 aa18.77■□□□□ 0.6
ITSN1-210ENST00000399353 ERBB4Q15303 1308 aa18.77■□□□□ 0.59
ITSN1-210ENST00000399353 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.59
ITSN1-210ENST00000399353 DDX11L8A8MPP1 907 aa18.77■□□□□ 0.59
ITSN1-210ENST00000399353 CFTRP13569 1480 aa18.76■□□□□ 0.59
ITSN1-210ENST00000399353 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
ITSN1-210ENST00000399353 DDX49Q9Y6V7 483 aaKnown RBP18.76■□□□□ 0.59
ITSN1-210ENST00000399353 NASPP49321 788 aaPredicted RBP18.76■□□□□ 0.59
ITSN1-210ENST00000399353 GBP4Q96PP9 640 aa18.76■□□□□ 0.59
ITSN1-210ENST00000399353 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
ITSN1-210ENST00000399353 C22orf23Q9BZE7 217 aa18.75■□□□□ 0.59
ITSN1-210ENST00000399353 KDM2BQ8NHM5 1336 aa18.75■□□□□ 0.59
ITSN1-210ENST00000399353 ROCK2O75116 1388 aaKnown RBP18.74■□□□□ 0.59
ITSN1-210ENST00000399353 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
ITSN1-210ENST00000399353 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
ITSN1-210ENST00000399353 XPCQ01831 940 aaPredicted RBP18.74■□□□□ 0.59
ITSN1-210ENST00000399353 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
ITSN1-210ENST00000399353 RRP7AQ9Y3A4 280 aaKnown RBP18.74■□□□□ 0.59
ITSN1-210ENST00000399353 UQCRHLA0A096LP55 91 aa18.71■□□□□ 0.59
ITSN1-210ENST00000399353 UQCRHP07919 91 aa18.71■□□□□ 0.59
ITSN1-210ENST00000399353 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.71■□□□□ 0.59
ITSN1-210ENST00000399353 FTSJ3Q8IY81 847 aaKnown RBP18.71■□□□□ 0.59
ITSN1-210ENST00000399353 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
ITSN1-210ENST00000399353 CASKIN1Q8WXD9 1431 aa18.71■□□□□ 0.59
ITSN1-210ENST00000399353 PLCB2Q00722 1185 aa18.7■□□□□ 0.58
ITSN1-210ENST00000399353 FOXD4L5Q5VV16 416 aaPredicted RBP18.69■□□□□ 0.58
ITSN1-210ENST00000399353 FOXD4L4Q8WXT5 416 aaPredicted RBP18.69■□□□□ 0.58
ITSN1-210ENST00000399353 DUSP27Q5VZP5 1158 aa18.69■□□□□ 0.58
ITSN1-210ENST00000399353 CENPJQ9HC77 1338 aaPredicted RBP18.68■□□□□ 0.58
ITSN1-210ENST00000399353 TMF1P82094 1093 aa18.67■□□□□ 0.58
ITSN1-210ENST00000399353 PDE4CQ08493 712 aa18.67■□□□□ 0.58
ITSN1-210ENST00000399353 ZSCAN30Q86W11 494 aa18.67■□□□□ 0.58
ITSN1-210ENST00000399353 PCF11O94913 1555 aaKnown RBP18.66■□□□□ 0.58
ITSN1-210ENST00000399353 GAS2L3Q86XJ1 694 aa18.66■□□□□ 0.58
ITSN1-210ENST00000399353 ANKRD30BQ9BXX2 1392 aa18.66■□□□□ 0.58
ITSN1-210ENST00000399353 PTPN23Q9H3S7 1636 aa18.65■□□□□ 0.58
ITSN1-210ENST00000399353 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
ITSN1-210ENST00000399353 RWDD1Q9H446 243 aaPredicted RBP18.65■□□□□ 0.58
ITSN1-210ENST00000399353 CALD1Q05682 793 aaKnown RBP18.65■□□□□ 0.58
ITSN1-210ENST00000399353 FSD2A1L4K1 749 aa18.64■□□□□ 0.57
ITSN1-210ENST00000399353 RNF214Q8ND24 703 aa18.64■□□□□ 0.57
ITSN1-210ENST00000399353 BBXQ8WY36 941 aaPredicted RBP18.64■□□□□ 0.57
ITSN1-210ENST00000399353 AAMPQ13685 434 aa18.64■□□□□ 0.57
ITSN1-210ENST00000399353 PMFBP1Q8TBY8 1022 aa18.64■□□□□ 0.57
ITSN1-210ENST00000399353 CGNL1Q0VF96 1302 aa18.64■□□□□ 0.57
ITSN1-210ENST00000399353 HNRNPMP52272 730 aaKnown RBP eCLIP18.64■□□□□ 0.57
ITSN1-210ENST00000399353 TBC1D32Q96NH3 1257 aa18.63■□□□□ 0.57
ITSN1-210ENST00000399353 CDK11BP21127 795 aaKnown RBP18.63■□□□□ 0.57
ITSN1-210ENST00000399353 LRPPRCP42704 1394 aaKnown RBP18.63■□□□□ 0.57
ITSN1-210ENST00000399353 USP19O94966 1318 aa18.62■□□□□ 0.57
ITSN1-210ENST00000399353 CBX1P83916 185 aa18.62■□□□□ 0.57
ITSN1-210ENST00000399353 CAVIN1Q6NZI2 390 aaKnown RBP18.62■□□□□ 0.57
ITSN1-210ENST00000399353 TNPO1Q92973 898 aaKnown RBP18.62■□□□□ 0.57
ITSN1-210ENST00000399353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.62■□□□□ 0.57
ITSN1-210ENST00000399353 FYCO1Q9BQS8 1478 aa18.61■□□□□ 0.57
ITSN1-210ENST00000399353 IGSF3O75054 1194 aa18.61■□□□□ 0.57
ITSN1-210ENST00000399353 ANTXR1Q9H6X2 564 aa18.61■□□□□ 0.57
ITSN1-210ENST00000399353 BCL11BQ9C0K0 894 aaPredicted RBP18.61■□□□□ 0.57
ITSN1-210ENST00000399353 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
ITSN1-210ENST00000399353 CCDC173Q0VFZ6 552 aa18.6■□□□□ 0.57
ITSN1-210ENST00000399353 FOXD4L6Q3SYB3 417 aaPredicted RBP18.6■□□□□ 0.57
ITSN1-210ENST00000399353 FOXD4L3Q6VB84 417 aaPredicted RBP18.6■□□□□ 0.57
ITSN1-210ENST00000399353 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
ITSN1-210ENST00000399353 MCTP1Q6DN14 999 aa18.59■□□□□ 0.57
ITSN1-210ENST00000399353 TNNQ9UQP3 1299 aa18.58■□□□□ 0.57
ITSN1-210ENST00000399353 MAP7D2Q96T17 732 aa18.58■□□□□ 0.57
ITSN1-210ENST00000399353 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
ITSN1-210ENST00000399353 FAM177BA6PVY3 158 aa18.57■□□□□ 0.56
ITSN1-210ENST00000399353 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
ITSN1-210ENST00000399353 SKOR2Q2VWA4 1001 aaPredicted RBP18.56■□□□□ 0.56
ITSN1-210ENST00000399353 ITPRIPQ8IWB1 547 aa18.56■□□□□ 0.56
ITSN1-210ENST00000399353 TSC1Q92574 1164 aa18.56■□□□□ 0.56
ITSN1-210ENST00000399353 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
ITSN1-210ENST00000399353 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
ITSN1-210ENST00000399353 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
ITSN1-210ENST00000399353 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
ITSN1-210ENST00000399353 OFD1O75665 1012 aa18.55■□□□□ 0.56
ITSN1-210ENST00000399353 FGD1P98174 961 aa18.55■□□□□ 0.56
ITSN1-210ENST00000399353 E9PSI1 815 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms