RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 FAM13BQ9NYF5 915 aa10.73□□□□□ -0.69
CTNND1-205ENST00000399050 RUSC2Q8N2Y8 1516 aa10.73□□□□□ -0.69
CTNND1-205ENST00000399050 FHOD3Q2V2M9 1422 aa10.72□□□□□ -0.69
CTNND1-205ENST00000399050 HSP90B1P14625 803 aaKnown RBP10.72□□□□□ -0.69
CTNND1-205ENST00000399050 RRP7AQ9Y3A4 280 aaKnown RBP10.72□□□□□ -0.69
CTNND1-205ENST00000399050 CCDC18Q5T9S5 1454 aa10.72□□□□□ -0.69
CTNND1-205ENST00000399050 ST20-MTHFSA0A0A6YYL1 179 aa10.72□□□□□ -0.69
CTNND1-205ENST00000399050 GOLGA6L1Q8N7Z2 621 aa10.72□□□□□ -0.69
CTNND1-205ENST00000399050 HMMRO75330 724 aa10.72□□□□□ -0.69
CTNND1-205ENST00000399050 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.69
CTNND1-205ENST00000399050 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
CTNND1-205ENST00000399050 E9PSI1 815 aa10.71□□□□□ -0.69
CTNND1-205ENST00000399050 BCL2L13Q9BXK5 485 aa10.71□□□□□ -0.69
CTNND1-205ENST00000399050 CHMP5Q9NZZ3 219 aa10.71□□□□□ -0.69
CTNND1-205ENST00000399050 ZNF771Q7L3S4 317 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-205ENST00000399050 IL27Q8NEV9 243 aa10.71□□□□□ -0.69
CTNND1-205ENST00000399050 ANKRD45Q5TZF3 282 aa10.71□□□□□ -0.7
CTNND1-205ENST00000399050 USP47Q96K76 1375 aa10.7□□□□□ -0.7
CTNND1-205ENST00000399050 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-205ENST00000399050 FAM43AQ8N2R8 423 aa10.7□□□□□ -0.7
CTNND1-205ENST00000399050 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
CTNND1-205ENST00000399050 CGNL1Q0VF96 1302 aa10.7□□□□□ -0.7
CTNND1-205ENST00000399050 FOXD4L6Q3SYB3 417 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-205ENST00000399050 FOXD4L3Q6VB84 417 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-205ENST00000399050 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
CTNND1-205ENST00000399050 KIF16BQ96L93 1317 aa10.69□□□□□ -0.7
CTNND1-205ENST00000399050 SLC4A10Q6U841 1118 aa10.69□□□□□ -0.7
CTNND1-205ENST00000399050 CNTLNQ9NXG0 1405 aa10.68□□□□□ -0.7
CTNND1-205ENST00000399050 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
CTNND1-205ENST00000399050 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-205ENST00000399050 STK31Q9BXU1 1019 aa10.67□□□□□ -0.7
CTNND1-205ENST00000399050 NOC3LQ8WTT2 800 aaKnown RBP10.67□□□□□ -0.7
CTNND1-205ENST00000399050 CCDC7Q96M83 1385 aa10.66□□□□□ -0.7
CTNND1-205ENST00000399050 SPAG9O60271 1321 aaKnown RBP10.65□□□□□ -0.7
CTNND1-205ENST00000399050 ZNF592Q92610 1267 aa10.65□□□□□ -0.7
CTNND1-205ENST00000399050 RILPL2Q969X0 211 aa10.65□□□□□ -0.7
CTNND1-205ENST00000399050 MRE11P49959 708 aa10.65□□□□□ -0.71
CTNND1-205ENST00000399050 GOLGA6L19H0YKK7 550 aa10.64□□□□□ -0.71
CTNND1-205ENST00000399050 APAF1O14727 1248 aa10.64□□□□□ -0.71
CTNND1-205ENST00000399050 HNRNPMP52272 730 aaKnown RBP eCLIP10.64□□□□□ -0.715e-7■■■■□ 21
CTNND1-205ENST00000399050 SMARCA2P51531 1590 aa10.64□□□□□ -0.71
CTNND1-205ENST00000399050 MCTP1Q6DN14 999 aa10.64□□□□□ -0.71
CTNND1-205ENST00000399050 R3HCC1Q9Y3T6 440 aaKnown RBP10.63□□□□□ -0.71
CTNND1-205ENST00000399050 KIF7Q2M1P5 1343 aa10.63□□□□□ -0.71
CTNND1-205ENST00000399050 LMOD3Q0VAK6 560 aa10.63□□□□□ -0.71
CTNND1-205ENST00000399050 ATP6V1DQ9Y5K8 247 aa10.63□□□□□ -0.71
CTNND1-205ENST00000399050 C22orf23Q9BZE7 217 aa10.63□□□□□ -0.71
CTNND1-205ENST00000399050 GGT6Q6P531 493 aa10.63□□□□□ -0.71
CTNND1-205ENST00000399050 PKNOX2Q96KN3 472 aa10.63□□□□□ -0.71
CTNND1-205ENST00000399050 TERF2IPQ9NYB0 399 aa10.63□□□□□ -0.71
CTNND1-205ENST00000399050 H3BQV1 296 aa10.62□□□□□ -0.71
CTNND1-205ENST00000399050 FRAT2O75474 233 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-205ENST00000399050 IFFO2Q5TF58 517 aa10.62□□□□□ -0.71
CTNND1-205ENST00000399050 DDX19BQ9UMR2 479 aa10.62□□□□□ -0.71
CTNND1-205ENST00000399050 CCDC144AA2RUR9 1427 aa10.62□□□□□ -0.71
CTNND1-205ENST00000399050 NPHP1O15259 732 aa10.61□□□□□ -0.71
CTNND1-205ENST00000399050 SF3A1Q15459 793 aaKnown RBP10.61□□□□□ -0.71
CTNND1-205ENST00000399050 CREBRFQ8IUR6 639 aa10.61□□□□□ -0.71
CTNND1-205ENST00000399050 TPM2P07951 284 aa10.61□□□□□ -0.71
CTNND1-205ENST00000399050 NASPP49321 788 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-205ENST00000399050 SETQ01105 290 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-205ENST00000399050 CCAR2Q8N163 923 aaKnown RBP10.61□□□□□ -0.71
CTNND1-205ENST00000399050 WASHC2AQ641Q2 1341 aa10.61□□□□□ -0.71
CTNND1-205ENST00000399050 CARMIL2Q6F5E8 1435 aa10.61□□□□□ -0.71
CTNND1-205ENST00000399050 BECN2A8MW95 431 aa10.61□□□□□ -0.71
CTNND1-205ENST00000399050 TRAK2O60296 914 aa10.61□□□□□ -0.71
CTNND1-205ENST00000399050 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
CTNND1-205ENST00000399050 TPM3P06753 285 aa10.6□□□□□ -0.71
CTNND1-205ENST00000399050 HDGFP51858 240 aaKnown RBP10.6□□□□□ -0.71
CTNND1-205ENST00000399050 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
CTNND1-205ENST00000399050 ELL2O00472 640 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-205ENST00000399050 A0A0U1RQG5 324 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-205ENST00000399050 CLSTN1O94985 981 aa10.6□□□□□ -0.71
CTNND1-205ENST00000399050 NUCB2P80303 420 aa10.6□□□□□ -0.71
CTNND1-205ENST00000399050 ERCC6Q03468 1493 aa10.6□□□□□ -0.71
CTNND1-205ENST00000399050 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
CTNND1-205ENST00000399050 REC8O95072 547 aa10.59□□□□□ -0.71
CTNND1-205ENST00000399050 AKNAQ7Z591 1439 aa10.59□□□□□ -0.71
CTNND1-205ENST00000399050 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
CTNND1-205ENST00000399050 KIF21BO75037 1637 aa10.59□□□□□ -0.71
CTNND1-205ENST00000399050 CHMP3Q9Y3E7 222 aa10.59□□□□□ -0.71
CTNND1-205ENST00000399050 FAM184AQ8NB25 1140 aa10.58□□□□□ -0.72
CTNND1-205ENST00000399050 MAP7D2Q96T17 732 aa10.58□□□□□ -0.72
CTNND1-205ENST00000399050 GPS2Q13227 327 aa10.58□□□□□ -0.72
CTNND1-205ENST00000399050 TEX35Q5T0J7 233 aa10.58□□□□□ -0.72
CTNND1-205ENST00000399050 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
CTNND1-205ENST00000399050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.722e-8■□□□□ 11.3
CTNND1-205ENST00000399050 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-205ENST00000399050 PANK1Q8TE04 598 aa10.58□□□□□ -0.72
CTNND1-205ENST00000399050 TRAK1Q9UPV9 953 aa10.58□□□□□ -0.72
CTNND1-205ENST00000399050 TDRD9Q8NDG6 1382 aaKnown RBP10.58□□□□□ -0.72
CTNND1-205ENST00000399050 NUTM2DQ5VT03 806 aaPredicted RBP10.57□□□□□ -0.72
CTNND1-205ENST00000399050 MTERF4Q7Z6M4 381 aaKnown RBP10.57□□□□□ -0.72
CTNND1-205ENST00000399050 MSH5O43196 834 aa10.57□□□□□ -0.72
CTNND1-205ENST00000399050 HDAC5Q9UQL6 1122 aa10.57□□□□□ -0.72
CTNND1-205ENST00000399050 UACAQ9BZF9 1416 aa10.57□□□□□ -0.72
CTNND1-205ENST00000399050 CHMP4AQ9BY43 222 aa10.57□□□□□ -0.72
CTNND1-205ENST00000399050 ISY1Q9ULR0 285 aaKnown RBP10.57□□□□□ -0.72
CTNND1-205ENST00000399050 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-205ENST00000399050 BACH2Q9BYV9 841 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms