RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 PANK3Q9H999 370 aa20.35■□□□□ 0.85
PCDHA12-201ENST00000398631 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
PCDHA12-201ENST00000398631 EVC2Q86UK5 1308 aa20.34■□□□□ 0.85
PCDHA12-201ENST00000398631 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
PCDHA12-201ENST00000398631 COG3Q96JB2 828 aa20.32■□□□□ 0.84
PCDHA12-201ENST00000398631 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 GBP4Q96PP9 640 aa20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 RBM19Q9Y4C8 960 aaKnown RBP20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 NAP1L5Q96NT1 182 aaPredicted RBP20.3■□□□□ 0.84
PCDHA12-201ENST00000398631 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
PCDHA12-201ENST00000398631 L1TD1Q5T7N2 865 aaKnown RBP20.3■□□□□ 0.84
PCDHA12-201ENST00000398631 IGF1RP08069 1367 aa20.29■□□□□ 0.84
PCDHA12-201ENST00000398631 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
PCDHA12-201ENST00000398631 FGD5Q6ZNL6 1462 aa20.27■□□□□ 0.84
PCDHA12-201ENST00000398631 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.83
PCDHA12-201ENST00000398631 MINK1Q8N4C8 1332 aaPredicted RBP20.26■□□□□ 0.83
PCDHA12-201ENST00000398631 PTMSP20962 102 aa20.26■□□□□ 0.83
PCDHA12-201ENST00000398631 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
PCDHA12-201ENST00000398631 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
PCDHA12-201ENST00000398631 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
PCDHA12-201ENST00000398631 CHAF1AQ13111 956 aaPredicted RBP20.25■□□□□ 0.83
PCDHA12-201ENST00000398631 DRC7Q8IY82 874 aa20.25■□□□□ 0.83
PCDHA12-201ENST00000398631 USP47Q96K76 1375 aa20.24■□□□□ 0.83
PCDHA12-201ENST00000398631 CLSTN1O94985 981 aa20.24■□□□□ 0.83
PCDHA12-201ENST00000398631 SLKQ9H2G2 1235 aaPredicted RBP20.24■□□□□ 0.83
PCDHA12-201ENST00000398631 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
PCDHA12-201ENST00000398631 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
PCDHA12-201ENST00000398631 MSNP26038 577 aaKnown RBP20.21■□□□□ 0.83
PCDHA12-201ENST00000398631 TEFQ10587 303 aa20.21■□□□□ 0.83
PCDHA12-201ENST00000398631 ELL2O00472 640 aaPredicted RBP20.2■□□□□ 0.83
PCDHA12-201ENST00000398631 FAM69CQ0P6D2 419 aa20.2■□□□□ 0.82
PCDHA12-201ENST00000398631 RAD54L2Q9Y4B4 1467 aa20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 G3V3G9 751 aa20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 DCAF8Q5TAQ9 597 aa20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 E9PSI1 815 aa20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 DEKP35659 375 aaKnown RBP20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
PCDHA12-201ENST00000398631 RTN4Q9NQC3 1192 aaKnown RBP20.18■□□□□ 0.82
PCDHA12-201ENST00000398631 FRAT2O75474 233 aaPredicted RBP20.18■□□□□ 0.82
PCDHA12-201ENST00000398631 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
PCDHA12-201ENST00000398631 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCDHA12-201ENST00000398631 CCDC34Q96HJ3 373 aa20.17■□□□□ 0.82
PCDHA12-201ENST00000398631 HSP90B1P14625 803 aaKnown RBP20.17■□□□□ 0.82
PCDHA12-201ENST00000398631 EVA1CP58658 441 aa20.17■□□□□ 0.82
PCDHA12-201ENST00000398631 ZKSCAN2Q63HK3 967 aa20.15■□□□□ 0.82
PCDHA12-201ENST00000398631 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
PCDHA12-201ENST00000398631 DIAPH1O60610 1272 aaKnown RBP20.14■□□□□ 0.81
PCDHA12-201ENST00000398631 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
PCDHA12-201ENST00000398631 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
PCDHA12-201ENST00000398631 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
PCDHA12-201ENST00000398631 TOMM22Q9NS69 142 aa20.12■□□□□ 0.81
PCDHA12-201ENST00000398631 APAF1O14727 1248 aa20.12■□□□□ 0.81
PCDHA12-201ENST00000398631 TTC5Q8N0Z6 440 aa20.12■□□□□ 0.81
PCDHA12-201ENST00000398631 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 PSME1Q06323 249 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 KIF3AQ9Y496 699 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 ST18O60284 1047 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 NEXNQ0ZGT2 675 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
PCDHA12-201ENST00000398631 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.81
PCDHA12-201ENST00000398631 CENPQQ7L2Z9 268 aaPredicted RBP20.09■□□□□ 0.81
PCDHA12-201ENST00000398631 CSPP1Q1MSJ5 1256 aa20.09■□□□□ 0.81
PCDHA12-201ENST00000398631 NOL8Q76FK4 1167 aaKnown RBP20.09■□□□□ 0.81
PCDHA12-201ENST00000398631 KIAA2012Q0VF49 1180 aa20.08■□□□□ 0.81
PCDHA12-201ENST00000398631 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.8
PCDHA12-201ENST00000398631 KIF16BQ96L93 1317 aa20.08■□□□□ 0.8
PCDHA12-201ENST00000398631 ANKRD45Q5TZF3 282 aa20.07■□□□□ 0.8
PCDHA12-201ENST00000398631 CUX1P39880 1505 aa20.07■□□□□ 0.8
PCDHA12-201ENST00000398631 TPM4P67936 248 aa20.06■□□□□ 0.8
PCDHA12-201ENST00000398631 IPO9Q96P70 1041 aaKnown RBP20.06■□□□□ 0.8
PCDHA12-201ENST00000398631 ANKRD50Q9ULJ7 1429 aa20.06■□□□□ 0.8
PCDHA12-201ENST00000398631 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
PCDHA12-201ENST00000398631 RASSF8Q8NHQ8 419 aa20.05■□□□□ 0.8
PCDHA12-201ENST00000398631 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
PCDHA12-201ENST00000398631 RIPK4P57078 832 aa20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 C9orf78Q9NZ63 289 aaPredicted RBP20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 RRP1P56182 461 aaKnown RBP20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 COG6Q9Y2V7 657 aa20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 PLIN1O60240 522 aa20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 API5Q9BZZ5 524 aaKnown RBP20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.79
PCDHA12-201ENST00000398631 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.79
PCDHA12-201ENST00000398631 LRRFIP1Q32MZ4 808 aaKnown RBP20.01■□□□□ 0.79
PCDHA12-201ENST00000398631 CHMP4CQ96CF2 233 aa20.01■□□□□ 0.79
PCDHA12-201ENST00000398631 DDX58O95786 925 aaKnown RBP20.01■□□□□ 0.79
PCDHA12-201ENST00000398631 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
PCDHA12-201ENST00000398631 EXOC6Q8TAG9 804 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 SF3A1Q15459 793 aaKnown RBP19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 AFAP1Q8N556 730 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 ATF3P18847 181 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 CRBNQ96SW2 442 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 FAM161AQ3B820 660 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 CASKIN1Q8WXD9 1431 aa19.98■□□□□ 0.79
PCDHA12-201ENST00000398631 DIAPH3Q9NSV4 1193 aa19.98■□□□□ 0.79
PCDHA12-201ENST00000398631 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
PCDHA12-201ENST00000398631 RAPGEF4Q8WZA2 1011 aa19.98■□□□□ 0.79
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