RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 TRIM6-TRIM34B2RNG4 842 aa18.62■□□□□ 0.57
CHL1-202ENST00000397491 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
CHL1-202ENST00000397491 TPM2P07951 284 aa18.61■□□□□ 0.57
CHL1-202ENST00000397491 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
CHL1-202ENST00000397491 ZNF592Q92610 1267 aa18.61■□□□□ 0.57
CHL1-202ENST00000397491 NOC3LQ8WTT2 800 aaKnown RBP18.61■□□□□ 0.57
CHL1-202ENST00000397491 MTERF4Q7Z6M4 381 aaKnown RBP18.6■□□□□ 0.57
CHL1-202ENST00000397491 COG6Q9Y2V7 657 aa18.6■□□□□ 0.57
CHL1-202ENST00000397491 CGNL1Q0VF96 1302 aa18.59■□□□□ 0.57
CHL1-202ENST00000397491 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
CHL1-202ENST00000397491 KIF16BQ96L93 1317 aa18.58■□□□□ 0.56
CHL1-202ENST00000397491 SRPK2P78362 688 aaKnown RBP18.58■□□□□ 0.56
CHL1-202ENST00000397491 BCL2L13Q9BXK5 485 aa18.58■□□□□ 0.56
CHL1-202ENST00000397491 SETQ01105 290 aaPredicted RBP18.57■□□□□ 0.56
CHL1-202ENST00000397491 HSP90B1P14625 803 aaKnown RBP18.57■□□□□ 0.56
CHL1-202ENST00000397491 ABCC8Q09428 1581 aa18.56■□□□□ 0.56
CHL1-202ENST00000397491 MSH5O43196 834 aa18.56■□□□□ 0.56
CHL1-202ENST00000397491 NASPP49321 788 aaPredicted RBP18.56■□□□□ 0.56
CHL1-202ENST00000397491 RBM10P98175 930 aaKnown RBP18.56■□□□□ 0.56
CHL1-202ENST00000397491 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
CHL1-202ENST00000397491 TDRD9Q8NDG6 1382 aaKnown RBP18.54■□□□□ 0.56
CHL1-202ENST00000397491 HMMRO75330 724 aa18.54■□□□□ 0.56
CHL1-202ENST00000397491 ANKRD45Q5TZF3 282 aa18.54■□□□□ 0.56
CHL1-202ENST00000397491 TRAK2O60296 914 aa18.54■□□□□ 0.56
CHL1-202ENST00000397491 SAFB2Q14151 953 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHL1-202ENST00000397491 GOLGA6L19H0YKK7 550 aa18.53■□□□□ 0.56
CHL1-202ENST00000397491 TEX35Q5T0J7 233 aa18.52■□□□□ 0.56
CHL1-202ENST00000397491 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.56
CHL1-202ENST00000397491 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.55
CHL1-202ENST00000397491 E9PSI1 815 aa18.51■□□□□ 0.55
CHL1-202ENST00000397491 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
CHL1-202ENST00000397491 GPS2Q13227 327 aa18.51■□□□□ 0.55
CHL1-202ENST00000397491 RRP9O43818 475 aaKnown RBP18.51■□□□□ 0.55
CHL1-202ENST00000397491 ATP6V1DQ9Y5K8 247 aa18.51■□□□□ 0.55
CHL1-202ENST00000397491 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
CHL1-202ENST00000397491 BECN2A8MW95 431 aa18.5■□□□□ 0.55
CHL1-202ENST00000397491 SOX12O15370 315 aa18.5■□□□□ 0.55
CHL1-202ENST00000397491 MCTP1Q6DN14 999 aa18.5■□□□□ 0.55
CHL1-202ENST00000397491 C22orf23Q9BZE7 217 aa18.49■□□□□ 0.55
CHL1-202ENST00000397491 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
CHL1-202ENST00000397491 NUP155O75694 1391 aa18.49■□□□□ 0.55
CHL1-202ENST00000397491 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
CHL1-202ENST00000397491 TPM3P06753 285 aa18.48■□□□□ 0.55
CHL1-202ENST00000397491 PANK3Q9H999 370 aa18.47■□□□□ 0.55
CHL1-202ENST00000397491 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
CHL1-202ENST00000397491 MLECQ14165 292 aa18.47■□□□□ 0.55
CHL1-202ENST00000397491 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.55
CHL1-202ENST00000397491 NUCB2P80303 420 aa18.45■□□□□ 0.54
CHL1-202ENST00000397491 SLC4A10Q6U841 1118 aa18.45■□□□□ 0.54
CHL1-202ENST00000397491 BACH2Q9BYV9 841 aa18.44■□□□□ 0.54
CHL1-202ENST00000397491 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
CHL1-202ENST00000397491 SF3A1Q15459 793 aaKnown RBP18.44■□□□□ 0.54
CHL1-202ENST00000397491 IFT57Q9NWB7 429 aa18.44■□□□□ 0.54
CHL1-202ENST00000397491 CREBRFQ8IUR6 639 aa18.43■□□□□ 0.54
CHL1-202ENST00000397491 RNF214Q8ND24 703 aa18.43■□□□□ 0.54
CHL1-202ENST00000397491 CCDC34Q96HJ3 373 aa18.43■□□□□ 0.54
CHL1-202ENST00000397491 APAF1O14727 1248 aa18.43■□□□□ 0.54
CHL1-202ENST00000397491 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
CHL1-202ENST00000397491 CCDC173Q0VFZ6 552 aa18.42■□□□□ 0.54
CHL1-202ENST00000397491 STK31Q9BXU1 1019 aa18.42■□□□□ 0.54
CHL1-202ENST00000397491 HDGFL2Q7Z4V5 671 aaPredicted RBP18.42■□□□□ 0.54
CHL1-202ENST00000397491 BCL11BQ9C0K0 894 aaPredicted RBP18.42■□□□□ 0.54
CHL1-202ENST00000397491 CCDC66A2RUB6 948 aa18.41■□□□□ 0.54
CHL1-202ENST00000397491 GPATCH3Q96I76 525 aa18.41■□□□□ 0.54
CHL1-202ENST00000397491 CHMP3Q9Y3E7 222 aa18.41■□□□□ 0.54
CHL1-202ENST00000397491 HOMER1Q86YM7 354 aa18.41■□□□□ 0.54
CHL1-202ENST00000397491 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
CHL1-202ENST00000397491 USP47Q96K76 1375 aa18.4■□□□□ 0.54
CHL1-202ENST00000397491 UBE2Q2Q8WVN8 375 aa18.4■□□□□ 0.54
CHL1-202ENST00000397491 H3BQV1 296 aa18.4■□□□□ 0.54
CHL1-202ENST00000397491 IFFO2Q5TF58 517 aa18.4■□□□□ 0.54
CHL1-202ENST00000397491 REC8O95072 547 aa18.39■□□□□ 0.54
CHL1-202ENST00000397491 GGT6Q6P531 493 aa18.39■□□□□ 0.53
CHL1-202ENST00000397491 CAVIN1Q6NZI2 390 aaKnown RBP18.38■□□□□ 0.53
CHL1-202ENST00000397491 DDX19BQ9UMR2 479 aa18.38■□□□□ 0.53
CHL1-202ENST00000397491 KIF3AQ9Y496 699 aa18.38■□□□□ 0.53
CHL1-202ENST00000397491 ESPNB1AK53 854 aa18.38■□□□□ 0.53
CHL1-202ENST00000397491 NOM1Q5C9Z4 860 aaKnown RBP18.38■□□□□ 0.53
CHL1-202ENST00000397491 STK26Q9P289 416 aa18.38■□□□□ 0.53
CHL1-202ENST00000397491 KANK1Q14678 1352 aa18.38■□□□□ 0.53
CHL1-202ENST00000397491 EIF3AQ14152 1382 aaKnown RBP18.37■□□□□ 0.53
CHL1-202ENST00000397491 SMARCA2P51531 1590 aa18.37■□□□□ 0.53
CHL1-202ENST00000397491 ARGLU1Q9NWB6 273 aaPredicted RBP18.37■□□□□ 0.53
CHL1-202ENST00000397491 CCDC7Q96M83 1385 aa18.37■□□□□ 0.53
CHL1-202ENST00000397491 CNTLNQ9NXG0 1405 aa18.37■□□□□ 0.53
CHL1-202ENST00000397491 GRPEL1Q9HAV7 217 aa18.37■□□□□ 0.53
CHL1-202ENST00000397491 HMGN5P82970 282 aaKnown RBP18.37■□□□□ 0.53
CHL1-202ENST00000397491 ELL2O00472 640 aaPredicted RBP18.36■□□□□ 0.53
CHL1-202ENST00000397491 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
CHL1-202ENST00000397491 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
CHL1-202ENST00000397491 ANKRD30AQ9BXX3 1397 aa18.35■□□□□ 0.53
CHL1-202ENST00000397491 AKNAQ7Z591 1439 aa18.34■□□□□ 0.53
CHL1-202ENST00000397491 FAM184AQ8NB25 1140 aa18.34■□□□□ 0.53
CHL1-202ENST00000397491 APPP05067 770 aa18.34■□□□□ 0.53
CHL1-202ENST00000397491 UQCRHLA0A096LP55 91 aa18.33■□□□□ 0.53
CHL1-202ENST00000397491 UQCRHP07919 91 aa18.33■□□□□ 0.53
CHL1-202ENST00000397491 MNS1Q8NEH6 495 aa18.33■□□□□ 0.53
CHL1-202ENST00000397491 LNPKQ9C0E8 428 aa18.33■□□□□ 0.53
CHL1-202ENST00000397491 PANK1Q8TE04 598 aa18.33■□□□□ 0.52
CHL1-202ENST00000397491 CADPSQ9ULU8 1353 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms