RNA–Protein interactions for RNA: ENST00000397000.5

PPARG-204, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best) BASIC

Gene PPARG, Length 1,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-204ENST00000397000 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
PPARG-204ENST00000397000 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
PPARG-204ENST00000397000 ABCC8Q09428 1581 aa11.68□□□□□ -0.54
PPARG-204ENST00000397000 MFSD10Q14728 455 aa11.67□□□□□ -0.54
PPARG-204ENST00000397000 ANO8Q9HCE9 1232 aaPredicted RBP11.67□□□□□ -0.54
PPARG-204ENST00000397000 FOSBP53539 338 aa11.66□□□□□ -0.54
PPARG-204ENST00000397000 KCNK17Q96T54 332 aa11.65□□□□□ -0.54
PPARG-204ENST00000397000 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
PPARG-204ENST00000397000 PDE4AP27815 886 aa11.64□□□□□ -0.55
PPARG-204ENST00000397000 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
PPARG-204ENST00000397000 HCSTQ9UBK5 93 aa11.63□□□□□ -0.55
PPARG-204ENST00000397000 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
PPARG-204ENST00000397000 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
PPARG-204ENST00000397000 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
PPARG-204ENST00000397000 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
PPARG-204ENST00000397000 SLC4A5Q9BY07 1137 aa11.61□□□□□ -0.55
PPARG-204ENST00000397000 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
PPARG-204ENST00000397000 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
PPARG-204ENST00000397000 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
PPARG-204ENST00000397000 DDX27Q96GQ7 796 aaKnown RBP11.59□□□□□ -0.55
PPARG-204ENST00000397000 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
PPARG-204ENST00000397000 LARP6Q9BRS8 491 aaKnown RBP11.58□□□□□ -0.56
PPARG-204ENST00000397000 EVI5O60447 810 aa11.57□□□□□ -0.56
PPARG-204ENST00000397000 ZBED2Q9BTP6 218 aa11.56□□□□□ -0.56
PPARG-204ENST00000397000 ADAM33Q9BZ11 813 aa11.56□□□□□ -0.56
PPARG-204ENST00000397000 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
PPARG-204ENST00000397000 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
PPARG-204ENST00000397000 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
PPARG-204ENST00000397000 ZNF608Q9ULD9 1512 aaPredicted RBP11.53□□□□□ -0.56
PPARG-204ENST00000397000 TARBP1Q13395 1621 aaKnown RBP11.51□□□□□ -0.57
PPARG-204ENST00000397000 PTPREP23469 700 aa11.51□□□□□ -0.57
PPARG-204ENST00000397000 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
PPARG-204ENST00000397000 KCNH8Q96L42 1107 aa11.51□□□□□ -0.57
PPARG-204ENST00000397000 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
PPARG-204ENST00000397000 WDR97A6NE52 1622 aa11.49□□□□□ -0.57
PPARG-204ENST00000397000 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
PPARG-204ENST00000397000 PCDHGA10Q9Y5H3 936 aa11.49□□□□□ -0.57
PPARG-204ENST00000397000 SUPT5HO00267 1087 aaKnown RBP11.46□□□□□ -0.57
PPARG-204ENST00000397000 SOGA1O94964 1423 aa11.45□□□□□ -0.58
PPARG-204ENST00000397000 MAP3K9P80192 1104 aa11.45□□□□□ -0.58
PPARG-204ENST00000397000 THSD4Q6ZMP0 1018 aa11.45□□□□□ -0.58
PPARG-204ENST00000397000 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.583e-6■■□□□ 13.8
PPARG-204ENST00000397000 CHD1O14646 1710 aa11.44□□□□□ -0.58
PPARG-204ENST00000397000 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
PPARG-204ENST00000397000 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
PPARG-204ENST00000397000 CUX1P39880 1505 aa11.42□□□□□ -0.58
PPARG-204ENST00000397000 COL9A1P20849 921 aa11.42□□□□□ -0.58
PPARG-204ENST00000397000 RIMBP3CA6NJZ7 1639 aa11.42□□□□□ -0.58
PPARG-204ENST00000397000 RIMBP3BA6NNM3 1639 aa11.42□□□□□ -0.58
PPARG-204ENST00000397000 RIMBP3Q9UFD9 1639 aa11.42□□□□□ -0.58
PPARG-204ENST00000397000 RAD54L2Q9Y4B4 1467 aa11.41□□□□□ -0.58
PPARG-204ENST00000397000 PHF14O94880 888 aa11.4□□□□□ -0.58
PPARG-204ENST00000397000 STAC3Q96MF2 364 aa11.4□□□□□ -0.58
PPARG-204ENST00000397000 PROX2Q3B8N5 592 aa11.39□□□□□ -0.59
PPARG-204ENST00000397000 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
PPARG-204ENST00000397000 ARHGEF11O15085 1522 aa11.39□□□□□ -0.59
PPARG-204ENST00000397000 TDRD9Q8NDG6 1382 aaKnown RBP11.39□□□□□ -0.59
PPARG-204ENST00000397000 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
PPARG-204ENST00000397000 PTPN5P54829 565 aa11.38□□□□□ -0.59
PPARG-204ENST00000397000 TYW1BQ6NUM6 668 aa11.38□□□□□ -0.59
PPARG-204ENST00000397000 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
PPARG-204ENST00000397000 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
PPARG-204ENST00000397000 FBXW7Q969H0 707 aa11.37□□□□□ -0.59
PPARG-204ENST00000397000 WNT2BQ93097 391 aa11.36□□□□□ -0.59
PPARG-204ENST00000397000 NBPF3Q9H094 633 aa11.36□□□□□ -0.59
PPARG-204ENST00000397000 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
PPARG-204ENST00000397000 SNAPC4Q5SXM2 1469 aa11.36□□□□□ -0.59
PPARG-204ENST00000397000 DPYSL4O14531 572 aa11.35□□□□□ -0.59
PPARG-204ENST00000397000 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
PPARG-204ENST00000397000 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
PPARG-204ENST00000397000 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
PPARG-204ENST00000397000 ABCA10Q8WWZ4 1543 aa11.34□□□□□ -0.59
PPARG-204ENST00000397000 GAPVD1Q14C86 1478 aa11.33□□□□□ -0.6
PPARG-204ENST00000397000 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
PPARG-204ENST00000397000 WRNQ14191 1432 aaPredicted RBP eCLIP11.33□□□□□ -0.6
PPARG-204ENST00000397000 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
PPARG-204ENST00000397000 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
PPARG-204ENST00000397000 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
PPARG-204ENST00000397000 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
PPARG-204ENST00000397000 EPAS1Q99814 870 aa11.31□□□□□ -0.6
PPARG-204ENST00000397000 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
PPARG-204ENST00000397000 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
PPARG-204ENST00000397000 PDIA6Q15084 440 aa11.28□□□□□ -0.6
PPARG-204ENST00000397000 CLASP1Q7Z460 1538 aa11.28□□□□□ -0.6
PPARG-204ENST00000397000 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
PPARG-204ENST00000397000 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
PPARG-204ENST00000397000 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
PPARG-204ENST00000397000 A0A0G2JS52 829 aa11.26□□□□□ -0.61
PPARG-204ENST00000397000 KIAA1468Q9P260 1216 aa11.26□□□□□ -0.61
PPARG-204ENST00000397000 ARAP1Q96P48 1450 aa11.25□□□□□ -0.61
PPARG-204ENST00000397000 SOWAHBA6NEL2 793 aa11.24□□□□□ -0.61
PPARG-204ENST00000397000 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
PPARG-204ENST00000397000 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
PPARG-204ENST00000397000 BCAMP50895 628 aa11.24□□□□□ -0.61
PPARG-204ENST00000397000 DDX12PQ92771 950 aa11.24□□□□□ -0.61
PPARG-204ENST00000397000 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
PPARG-204ENST00000397000 ZFRQ96KR1 1074 aaKnown RBP11.23□□□□□ -0.61
PPARG-204ENST00000397000 RGS20O76081 388 aa11.22□□□□□ -0.61
PPARG-204ENST00000397000 ADAMTS12P58397 1594 aa11.22□□□□□ -0.61
PPARG-204ENST00000397000 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms