RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 ANKRD50Q9ULJ7 1429 aa20.6■□□□□ 0.89
GAPDH-204ENST00000396859 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
GAPDH-204ENST00000396859 RNF17Q9BXT8 1623 aaKnown RBP20.58■□□□□ 0.89
GAPDH-204ENST00000396859 FAM135AQ9P2D6 1515 aa20.56■□□□□ 0.88
GAPDH-204ENST00000396859 KANK1Q14678 1352 aa20.55■□□□□ 0.88
GAPDH-204ENST00000396859 PTPRMP28827 1452 aa20.55■□□□□ 0.88
GAPDH-204ENST00000396859 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
GAPDH-204ENST00000396859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.88
GAPDH-204ENST00000396859 CLTCQ00610 1675 aaKnown RBP20.53■□□□□ 0.88
GAPDH-204ENST00000396859 GCC2Q8IWJ2 1684 aa20.53■□□□□ 0.88
GAPDH-204ENST00000396859 KDM5DQ9BY66 1539 aa20.53■□□□□ 0.88
GAPDH-204ENST00000396859 HFM1A2PYH4 1435 aa20.52■□□□□ 0.87
GAPDH-204ENST00000396859 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
GAPDH-204ENST00000396859 PLPPR3Q6T4P5 718 aa20.51■□□□□ 0.87
GAPDH-204ENST00000396859 DEPDC5O75140 1603 aa20.51■□□□□ 0.87
GAPDH-204ENST00000396859 NAIPQ13075 1403 aa20.51■□□□□ 0.87
GAPDH-204ENST00000396859 ZC3H13Q5T200 1668 aaKnown RBP20.51■□□□□ 0.87
GAPDH-204ENST00000396859 PRDM15P57071 1507 aaPredicted RBP20.5■□□□□ 0.87
GAPDH-204ENST00000396859 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
GAPDH-204ENST00000396859 ZMYM3Q14202 1370 aa20.46■□□□□ 0.87
GAPDH-204ENST00000396859 C3P01024 1663 aa20.46■□□□□ 0.87
GAPDH-204ENST00000396859 ABCC3O15438 1527 aa20.46■□□□□ 0.87
GAPDH-204ENST00000396859 UNC13BO14795 1591 aa20.46■□□□□ 0.87
GAPDH-204ENST00000396859 CEP152O94986 1710 aa20.45■□□□□ 0.86
GAPDH-204ENST00000396859 CEBPAP49715 358 aaPredicted RBP20.44■□□□□ 0.86
GAPDH-204ENST00000396859 CAMSAP1Q5T5Y3 1602 aa20.42■□□□□ 0.86
GAPDH-204ENST00000396859 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
GAPDH-204ENST00000396859 NUP155O75694 1391 aa20.41■□□□□ 0.86
GAPDH-204ENST00000396859 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
GAPDH-204ENST00000396859 VWDEQ8N2E2 1590 aa20.41■□□□□ 0.86
GAPDH-204ENST00000396859 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
GAPDH-204ENST00000396859 LMTK2Q8IWU2 1503 aa20.39■□□□□ 0.85
GAPDH-204ENST00000396859 PZPP20742 1482 aa20.39■□□□□ 0.85
GAPDH-204ENST00000396859 TRIM52Q96A61 297 aa20.39■□□□□ 0.85
GAPDH-204ENST00000396859 NPATQ14207 1427 aa20.38■□□□□ 0.85
GAPDH-204ENST00000396859 IQGAP3Q86VI3 1631 aa20.38■□□□□ 0.85
GAPDH-204ENST00000396859 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
GAPDH-204ENST00000396859 TET3O43151 1660 aa20.35■□□□□ 0.85
GAPDH-204ENST00000396859 EFCAB6Q5THR3 1501 aa20.34■□□□□ 0.85
GAPDH-204ENST00000396859 RAB3GAP2Q9H2M9 1393 aa20.33■□□□□ 0.84
GAPDH-204ENST00000396859 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
GAPDH-204ENST00000396859 SETD1BQ9UPS6 1966 aaKnown RBP20.32■□□□□ 0.84
GAPDH-204ENST00000396859 FBXO31Q5XUX0 539 aaPredicted RBP20.32■□□□□ 0.84
GAPDH-204ENST00000396859 UHRF1BP1Q6BDS2 1440 aa20.32■□□□□ 0.84
GAPDH-204ENST00000396859 TNRQ92752 1358 aa20.31■□□□□ 0.84
GAPDH-204ENST00000396859 RPRD2Q5VT52 1461 aaKnown RBP20.3■□□□□ 0.84
GAPDH-204ENST00000396859 ERVK-7P63135 1459 aa20.3■□□□□ 0.84
GAPDH-204ENST00000396859 SPATA31D1Q6ZQQ2 1576 aa20.29■□□□□ 0.84
GAPDH-204ENST00000396859 CFAP65Q6ZU64 1925 aaKnown RBP20.28■□□□□ 0.84
GAPDH-204ENST00000396859 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
GAPDH-204ENST00000396859 HRCP23327 699 aa20.27■□□□□ 0.84
GAPDH-204ENST00000396859 MYO3AQ8NEV4 1616 aa20.26■□□□□ 0.83
GAPDH-204ENST00000396859 E9PCH4 1651 aa20.26■□□□□ 0.83
GAPDH-204ENST00000396859 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
GAPDH-204ENST00000396859 LMTK3Q96Q04 1460 aa20.23■□□□□ 0.83
GAPDH-204ENST00000396859 PKD2Q13563 968 aa20.22■□□□□ 0.83
GAPDH-204ENST00000396859 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
GAPDH-204ENST00000396859 NOS1P29475 1434 aa20.21■□□□□ 0.83
GAPDH-204ENST00000396859 ZNF142P52746 1687 aaPredicted RBP20.2■□□□□ 0.82
GAPDH-204ENST00000396859 A2ML1A8K2U0 1454 aa20.2■□□□□ 0.82
GAPDH-204ENST00000396859 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
GAPDH-204ENST00000396859 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
GAPDH-204ENST00000396859 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
GAPDH-204ENST00000396859 SYNMO15061 1565 aa20.17■□□□□ 0.82
GAPDH-204ENST00000396859 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
GAPDH-204ENST00000396859 HSPA2P54652 639 aa20.16■□□□□ 0.82
GAPDH-204ENST00000396859 UGGT1Q9NYU2 1555 aa20.16■□□□□ 0.82
GAPDH-204ENST00000396859 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
GAPDH-204ENST00000396859 PTPRTO14522 1441 aa20.13■□□□□ 0.81
GAPDH-204ENST00000396859 IDI1Q13907 227 aa20.13■□□□□ 0.81
GAPDH-204ENST00000396859 PIK3C2BO00750 1634 aa20.13■□□□□ 0.81
GAPDH-204ENST00000396859 PCGF6Q9BYE7 350 aa20.12■□□□□ 0.81
GAPDH-204ENST00000396859 TRPM2O94759 1503 aa20.12■□□□□ 0.81
GAPDH-204ENST00000396859 CHGAP10645 457 aaKnown RBP20.1■□□□□ 0.81
GAPDH-204ENST00000396859 FOXD1Q16676 465 aa20.1■□□□□ 0.81
GAPDH-204ENST00000396859 UBR1Q8IWV7 1749 aa20.1■□□□□ 0.81
GAPDH-204ENST00000396859 ILDR1Q86SU0 546 aaPredicted RBP20.09■□□□□ 0.81
GAPDH-204ENST00000396859 KDM5AP29375 1690 aaKnown RBP20.09■□□□□ 0.81
GAPDH-204ENST00000396859 ADGRB3O60242 1522 aa20.08■□□□□ 0.81
GAPDH-204ENST00000396859 PLA2R1Q13018 1463 aa20.07■□□□□ 0.8
GAPDH-204ENST00000396859 CCDC144AA2RUR9 1427 aa20.05■□□□□ 0.8
GAPDH-204ENST00000396859 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
GAPDH-204ENST00000396859 ANKLE2Q86XL3 938 aa20.04■□□□□ 0.8
GAPDH-204ENST00000396859 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
GAPDH-204ENST00000396859 EID1Q9Y6B2 187 aa20.03■□□□□ 0.8
GAPDH-204ENST00000396859 KIF1BO60333 1816 aa20.03■□□□□ 0.8
GAPDH-204ENST00000396859 TMEM131LA2VDJ0 1609 aa20.02■□□□□ 0.8
GAPDH-204ENST00000396859 HDGFP51858 240 aaKnown RBP20.02■□□□□ 0.8
GAPDH-204ENST00000396859 TMEM2Q9UHN6 1383 aa20■□□□□ 0.79
GAPDH-204ENST00000396859 POLR1AO95602 1720 aaPredicted RBP20■□□□□ 0.79
GAPDH-204ENST00000396859 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
GAPDH-204ENST00000396859 SLIT1O75093 1534 aa20■□□□□ 0.79
GAPDH-204ENST00000396859 NCKAP5LQ9HCH0 1330 aa20■□□□□ 0.79
GAPDH-204ENST00000396859 MYO5BQ9ULV0 1848 aa19.99■□□□□ 0.79
GAPDH-204ENST00000396859 STRCQ7RTU9 1775 aa19.99■□□□□ 0.79
GAPDH-204ENST00000396859 ARHGAP23Q9P227 1491 aa19.99■□□□□ 0.79
GAPDH-204ENST00000396859 TXNDC2Q86VQ3 553 aa19.98■□□□□ 0.79
GAPDH-204ENST00000396859 ANKRD30BQ9BXX2 1392 aa19.97■□□□□ 0.79
GAPDH-204ENST00000396859 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.97■□□□□ 0.79
GAPDH-204ENST00000396859 SCAF11Q99590 1463 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms