RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ATP10BO94823 1461 aa10.32□□□□□ -0.76
RTN4-205ENST00000394609 ABCA8O94911 1581 aa10.32□□□□□ -0.76
RTN4-205ENST00000394609 ZNF467Q7Z7K2 595 aaPredicted RBP10.32□□□□□ -0.76
RTN4-205ENST00000394609 UACAQ9BZF9 1416 aa10.31□□□□□ -0.76
RTN4-205ENST00000394609 FAM163AQ96GL9 167 aaPredicted RBP10.31□□□□□ -0.76
RTN4-205ENST00000394609 SUPT6HQ7KZ85 1726 aaKnown RBP10.31□□□□□ -0.76
RTN4-205ENST00000394609 ARHGEF11O15085 1522 aa10.3□□□□□ -0.76
RTN4-205ENST00000394609 TROQ12816 1431 aaPredicted RBP10.3□□□□□ -0.76
RTN4-205ENST00000394609 CHRM1P11229 460 aaPredicted RBP10.29□□□□□ -0.76
RTN4-205ENST00000394609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.28□□□□□ -0.76
RTN4-205ENST00000394609 IRX5P78411 483 aaPredicted RBP10.28□□□□□ -0.76
RTN4-205ENST00000394609 OCEL1Q9H607 264 aa10.27□□□□□ -0.76
RTN4-205ENST00000394609 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.76
RTN4-205ENST00000394609 ZNF644Q9H582 1327 aaPredicted RBP10.27□□□□□ -0.76
RTN4-205ENST00000394609 PTPRKQ15262 1439 aa10.26□□□□□ -0.77
RTN4-205ENST00000394609 CFDP1Q9UEE9 299 aaPredicted RBP10.26□□□□□ -0.77
RTN4-205ENST00000394609 CHIC2Q9UKJ5 165 aa10.25□□□□□ -0.77
RTN4-205ENST00000394609 ZNF777Q9ULD5 760 aaPredicted RBP10.25□□□□□ -0.77
RTN4-205ENST00000394609 RAB3GAP2Q9H2M9 1393 aa10.25□□□□□ -0.77
RTN4-205ENST00000394609 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
RTN4-205ENST00000394609 SLAIN1Q8ND83 568 aa10.24□□□□□ -0.77
RTN4-205ENST00000394609 KCNH8Q96L42 1107 aa10.24□□□□□ -0.77
RTN4-205ENST00000394609 SETD5Q9C0A6 1442 aa10.24□□□□□ -0.77
RTN4-205ENST00000394609 ABCC2Q92887 1545 aa10.24□□□□□ -0.77
RTN4-205ENST00000394609 PTPN23Q9H3S7 1636 aa10.24□□□□□ -0.77
RTN4-205ENST00000394609 GOLGA2Q08379 1002 aa10.23□□□□□ -0.77
RTN4-205ENST00000394609 SPOCK2Q92563 424 aa10.23□□□□□ -0.77
RTN4-205ENST00000394609 KIF14Q15058 1648 aa10.23□□□□□ -0.77
RTN4-205ENST00000394609 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
RTN4-205ENST00000394609 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
RTN4-205ENST00000394609 TCOF1Q13428 1488 aaKnown RBP10.22□□□□□ -0.77
RTN4-205ENST00000394609 DHX57Q6P158 1386 aaKnown RBP10.22□□□□□ -0.77
RTN4-205ENST00000394609 RRP7BPQ9NSQ0 103 aa10.22□□□□□ -0.77
RTN4-205ENST00000394609 MKRN3Q13064 507 aaKnown RBP10.2□□□□□ -0.78
RTN4-205ENST00000394609 UHRF1BP1LA0JNW5 1464 aa10.2□□□□□ -0.78
RTN4-205ENST00000394609 ABCC10Q5T3U5 1492 aa10.19□□□□□ -0.78
RTN4-205ENST00000394609 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.18□□□□□ -0.78
RTN4-205ENST00000394609 KDM5BQ9UGL1 1544 aa10.18□□□□□ -0.78
RTN4-205ENST00000394609 HFM1A2PYH4 1435 aa10.17□□□□□ -0.78
RTN4-205ENST00000394609 ABCC5O15440 1437 aa10.17□□□□□ -0.78
RTN4-205ENST00000394609 PSEN1P49768 467 aa10.17□□□□□ -0.78
RTN4-205ENST00000394609 NAIPQ13075 1403 aa10.17□□□□□ -0.78
RTN4-205ENST00000394609 ADCY10Q96PN6 1610 aa10.17□□□□□ -0.78
RTN4-205ENST00000394609 DAPK1P53355 1430 aa10.17□□□□□ -0.78
RTN4-205ENST00000394609 SNPHO15079 494 aa10.17□□□□□ -0.78
RTN4-205ENST00000394609 CAMSAP2Q08AD1 1489 aa10.16□□□□□ -0.78
RTN4-205ENST00000394609 HNRNPMP52272 730 aaKnown RBP eCLIP10.16□□□□□ -0.782e-6■■■□□ 15.4
RTN4-205ENST00000394609 L3MBTL3Q96JM7 780 aaPredicted RBP10.16□□□□□ -0.78
RTN4-205ENST00000394609 PDAP1Q13442 181 aaKnown RBP10.15□□□□□ -0.78
RTN4-205ENST00000394609 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
RTN4-205ENST00000394609 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.78
RTN4-205ENST00000394609 IFNLR1Q8IU57 520 aaPredicted RBP10.15□□□□□ -0.79
RTN4-205ENST00000394609 CLSPNQ9HAW4 1339 aa10.14□□□□□ -0.79
RTN4-205ENST00000394609 CYB5RLQ6IPT4 315 aa10.13□□□□□ -0.79
RTN4-205ENST00000394609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.13□□□□□ -0.793e-14■□□□□ 8.3
RTN4-205ENST00000394609 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
RTN4-205ENST00000394609 ITSN2Q9NZM3 1697 aa10.12□□□□□ -0.79
RTN4-205ENST00000394609 CDC42BPAQ5VT25 1732 aa10.11□□□□□ -0.79
RTN4-205ENST00000394609 TTC37Q6PGP7 1564 aa10.11□□□□□ -0.79
RTN4-205ENST00000394609 AKNAQ7Z591 1439 aa10.11□□□□□ -0.79
RTN4-205ENST00000394609 ROCK1Q13464 1354 aa10.11□□□□□ -0.79
RTN4-205ENST00000394609 DNMT1P26358 1616 aaKnown RBP10.11□□□□□ -0.79
RTN4-205ENST00000394609 TSPY4P0CV99 314 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 TSPY10P0CW01 314 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 C3orf67Q6ZVT6 689 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
RTN4-205ENST00000394609 SIN3AQ96ST3 1273 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.79
RTN4-205ENST00000394609 ARHGAP5Q13017 1502 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 ASXL2Q76L83 1435 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 WDR7Q9Y4E6 1490 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 ST18O60284 1047 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 NEUROD1Q13562 356 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 MAPKBP1O60336 1514 aa10.1□□□□□ -0.79
RTN4-205ENST00000394609 EFCAB2Q5VUJ9 269 aa10.09□□□□□ -0.79
RTN4-205ENST00000394609 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
RTN4-205ENST00000394609 PLCH2O75038 1416 aa10.09□□□□□ -0.79
RTN4-205ENST00000394609 NCOA1Q15788 1441 aa10.09□□□□□ -0.79
RTN4-205ENST00000394609 MBD5Q9P267 1494 aa10.08□□□□□ -0.8
RTN4-205ENST00000394609 ANKRD30AQ9BXX3 1397 aa10.08□□□□□ -0.8
RTN4-205ENST00000394609 KDM6BO15054 1643 aa10.07□□□□□ -0.8
RTN4-205ENST00000394609 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
RTN4-205ENST00000394609 SAMD9LQ8IVG5 1584 aa10.07□□□□□ -0.8
RTN4-205ENST00000394609 PREX2Q70Z35 1606 aa10.07□□□□□ -0.8
RTN4-205ENST00000394609 RSPH4AQ5TD94 716 aa10.06□□□□□ -0.8
RTN4-205ENST00000394609 CDC42BPBQ9Y5S2 1711 aa10.06□□□□□ -0.8
RTN4-205ENST00000394609 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
RTN4-205ENST00000394609 MPHOSPH9Q99550 1183 aa10.06□□□□□ -0.8
RTN4-205ENST00000394609 SYCP2Q9BX26 1530 aa10.05□□□□□ -0.8
RTN4-205ENST00000394609 G3V3G9 751 aa10.04□□□□□ -0.8
RTN4-205ENST00000394609 ARHGEF12Q9NZN5 1544 aa10.04□□□□□ -0.8
RTN4-205ENST00000394609 ADGRL2O95490 1459 aa10.04□□□□□ -0.8
RTN4-205ENST00000394609 CCDC141Q6ZP82 1450 aa10.04□□□□□ -0.8
RTN4-205ENST00000394609 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
RTN4-205ENST00000394609 ILDR1Q86SU0 546 aaPredicted RBP10.04□□□□□ -0.8
RTN4-205ENST00000394609 ANKRD50Q9ULJ7 1429 aa10.03□□□□□ -0.8
RTN4-205ENST00000394609 KIAA1107Q9UPP5 1409 aa10.03□□□□□ -0.8
RTN4-205ENST00000394609 KIF15Q9NS87 1388 aa10.03□□□□□ -0.8
RTN4-205ENST00000394609 GCC2Q8IWJ2 1684 aa10.03□□□□□ -0.8
RTN4-205ENST00000394609 AFAP1Q8N556 730 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms