RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SHROOM2Q13796 1616 aa26.72■■□□□ 1.87
RCCD1-201ENST00000394258 ROCK2O75116 1388 aaKnown RBP26.7■■□□□ 1.87
RCCD1-201ENST00000394258 ABCC2Q92887 1545 aa26.7■■□□□ 1.86
RCCD1-201ENST00000394258 CCDC144AA2RUR9 1427 aa26.7■■□□□ 1.86
RCCD1-201ENST00000394258 ARHGEF12Q9NZN5 1544 aa26.7■■□□□ 1.86
RCCD1-201ENST00000394258 ZBED9Q6R2W3 1325 aa26.68■■□□□ 1.86
RCCD1-201ENST00000394258 PLEKHH2Q8IVE3 1493 aa26.68■■□□□ 1.86
RCCD1-201ENST00000394258 NBPF1Q3BBV0 1214 aa26.66■■□□□ 1.86
RCCD1-201ENST00000394258 ARID4BQ4LE39 1312 aaPredicted RBP26.65■■□□□ 1.86
RCCD1-201ENST00000394258 MYO5CQ9NQX4 1742 aa26.62■■□□□ 1.85
RCCD1-201ENST00000394258 PLA2R1Q13018 1463 aa26.62■■□□□ 1.85
RCCD1-201ENST00000394258 EFCAB2Q5VUJ9 269 aa26.62■■□□□ 1.85
RCCD1-201ENST00000394258 TMC1Q8TDI8 760 aa26.6■■□□□ 1.85
RCCD1-201ENST00000394258 PLCH2O75038 1416 aa26.56■■□□□ 1.84
RCCD1-201ENST00000394258 PRAG1Q86YV5 1406 aa26.56■■□□□ 1.84
RCCD1-201ENST00000394258 MAST1Q9Y2H9 1570 aa26.55■■□□□ 1.84
RCCD1-201ENST00000394258 AFAP1Q8N556 730 aa26.55■■□□□ 1.84
RCCD1-201ENST00000394258 B4GALNT3Q6L9W6 998 aa26.54■■□□□ 1.84
RCCD1-201ENST00000394258 PPP4R2Q9NY27 417 aa26.54■■□□□ 1.84
RCCD1-201ENST00000394258 TRAPPC8Q9Y2L5 1435 aa26.54■■□□□ 1.84
RCCD1-201ENST00000394258 ZCCHC11Q5TAX3 1644 aaKnown RBP26.54■■□□□ 1.84
RCCD1-201ENST00000394258 PNISRQ8TF01 805 aaKnown RBP26.53■■□□□ 1.84
RCCD1-201ENST00000394258 UNC13BO14795 1591 aa26.53■■□□□ 1.84
RCCD1-201ENST00000394258 A2MP01023 1474 aa26.52■■□□□ 1.84
RCCD1-201ENST00000394258 MSH5O43196 834 aa26.5■■□□□ 1.83
RCCD1-201ENST00000394258 DUOX2Q9NRD8 1548 aa26.5■■□□□ 1.83
RCCD1-201ENST00000394258 PLXNC1O60486 1568 aa26.49■■□□□ 1.83
RCCD1-201ENST00000394258 SPAG9O60271 1321 aaKnown RBP26.48■■□□□ 1.83
RCCD1-201ENST00000394258 TRPM1Q7Z4N2 1603 aa26.47■■□□□ 1.83
RCCD1-201ENST00000394258 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
RCCD1-201ENST00000394258 MYT1LQ9UL68 1186 aa26.46■■□□□ 1.83
RCCD1-201ENST00000394258 IQGAP3Q86VI3 1631 aa26.46■■□□□ 1.83
RCCD1-201ENST00000394258 ERICH6BQ5W0A0 696 aa26.46■■□□□ 1.83
RCCD1-201ENST00000394258 MYBBP1AQ9BQG0 1328 aaKnown RBP26.44■■□□□ 1.82
RCCD1-201ENST00000394258 ERBINQ96RT1 1412 aa26.44■■□□□ 1.82
RCCD1-201ENST00000394258 RALBP1Q15311 655 aa26.42■■□□□ 1.82
RCCD1-201ENST00000394258 UHRF1BP1LA0JNW5 1464 aa26.41■■□□□ 1.82
RCCD1-201ENST00000394258 ABCC1P33527 1531 aa26.41■■□□□ 1.82
RCCD1-201ENST00000394258 SALL2Q9Y467 1007 aaPredicted RBP26.41■■□□□ 1.82
RCCD1-201ENST00000394258 NUDCQ9Y266 331 aa26.41■■□□□ 1.82
RCCD1-201ENST00000394258 SMG6Q86US8 1419 aaKnown RBP26.4■■□□□ 1.82
RCCD1-201ENST00000394258 TESK2Q96S53 571 aa26.4■■□□□ 1.82
RCCD1-201ENST00000394258 DISP3Q9P2K9 1392 aa26.4■■□□□ 1.82
RCCD1-201ENST00000394258 CC2D1BQ5T0F9 858 aaKnown RBP26.39■■□□□ 1.82
RCCD1-201ENST00000394258 GPRASP1Q5JY77 1395 aa26.38■■□□□ 1.81
RCCD1-201ENST00000394258 BRD4O60885 1362 aaPredicted RBP26.36■■□□□ 1.81
RCCD1-201ENST00000394258 PER1O15534 1290 aaPredicted RBP26.36■■□□□ 1.81
RCCD1-201ENST00000394258 MAGI2Q86UL8 1455 aa26.36■■□□□ 1.81
RCCD1-201ENST00000394258 PANK3Q9H999 370 aa26.35■■□□□ 1.81
RCCD1-201ENST00000394258 KTN1Q86UP2 1357 aaKnown RBP26.35■■□□□ 1.81
RCCD1-201ENST00000394258 ATP10AO60312 1499 aa26.32■■□□□ 1.8
RCCD1-201ENST00000394258 E9PCH4 1651 aa26.32■■□□□ 1.8
RCCD1-201ENST00000394258 TMF1P82094 1093 aa26.32■■□□□ 1.8
RCCD1-201ENST00000394258 NLRP13Q86W25 1043 aa26.32■■□□□ 1.8
RCCD1-201ENST00000394258 KIF3BO15066 747 aa26.31■■□□□ 1.8
RCCD1-201ENST00000394258 LRPPRCP42704 1394 aaKnown RBP26.3■■□□□ 1.8
RCCD1-201ENST00000394258 PRDM15P57071 1507 aaPredicted RBP26.3■■□□□ 1.8
RCCD1-201ENST00000394258 COL17A1Q9UMD9 1497 aaPredicted RBP26.29■■□□□ 1.8
RCCD1-201ENST00000394258 PARD3Q8TEW0 1356 aa26.28■■□□□ 1.8
RCCD1-201ENST00000394258 FANCAO15360 1455 aa26.27■■□□□ 1.8
RCCD1-201ENST00000394258 WDR7Q9Y4E6 1490 aa26.27■■□□□ 1.8
RCCD1-201ENST00000394258 SCAPERQ9BY12 1400 aa26.27■■□□□ 1.8
RCCD1-201ENST00000394258 ZFYVE16Q7Z3T8 1539 aa26.26■■□□□ 1.79
RCCD1-201ENST00000394258 RTEL1-TNFRSF6BF6WH68 1400 aa26.24■■□□□ 1.79
RCCD1-201ENST00000394258 RNF123Q5XPI4 1314 aa26.24■■□□□ 1.79
RCCD1-201ENST00000394258 EIF2AK4Q9P2K8 1649 aaKnown RBP26.24■■□□□ 1.79
RCCD1-201ENST00000394258 FANCIQ9NVI1 1328 aa26.23■■□□□ 1.79
RCCD1-201ENST00000394258 ERICH6Q7L0X2 663 aa26.22■■□□□ 1.79
RCCD1-201ENST00000394258 LAMC1P11047 1609 aa26.19■■□□□ 1.78
RCCD1-201ENST00000394258 ADGRL1O94910 1474 aa26.19■■□□□ 1.78
RCCD1-201ENST00000394258 KANK1Q14678 1352 aa26.19■■□□□ 1.78
RCCD1-201ENST00000394258 ATP7AQ04656 1500 aa26.18■■□□□ 1.78
RCCD1-201ENST00000394258 CCDC136Q96JN2 1154 aa26.18■■□□□ 1.78
RCCD1-201ENST00000394258 ARAP3Q8WWN8 1544 aa26.16■■□□□ 1.78
RCCD1-201ENST00000394258 ASXL2Q76L83 1435 aa26.16■■□□□ 1.78
RCCD1-201ENST00000394258 TRPM2O94759 1503 aa26.15■■□□□ 1.78
RCCD1-201ENST00000394258 CDCA7LQ96GN5 454 aa26.14■■□□□ 1.78
RCCD1-201ENST00000394258 CLTCL1P53675 1640 aa26.14■■□□□ 1.78
RCCD1-201ENST00000394258 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.77
RCCD1-201ENST00000394258 PTPRTO14522 1441 aa26.14■■□□□ 1.77
RCCD1-201ENST00000394258 MADDQ8WXG6 1647 aa26.13■■□□□ 1.77
RCCD1-201ENST00000394258 KNSTRNQ9Y448 316 aa26.12■■□□□ 1.77
RCCD1-201ENST00000394258 SPHKAPQ2M3C7 1700 aa26.12■■□□□ 1.77
RCCD1-201ENST00000394258 ABCA9Q8IUA7 1624 aa26.11■■□□□ 1.77
RCCD1-201ENST00000394258 RNF17Q9BXT8 1623 aaKnown RBP26.1■■□□□ 1.77
RCCD1-201ENST00000394258 CFAP70Q5T0N1 1121 aa26.1■■□□□ 1.77
RCCD1-201ENST00000394258 UGGT1Q9NYU2 1555 aa26.09■■□□□ 1.77
RCCD1-201ENST00000394258 RCAN3Q9UKA8 241 aa26.09■■□□□ 1.77
RCCD1-201ENST00000394258 INO80Q9ULG1 1556 aaPredicted RBP26.08■■□□□ 1.77
RCCD1-201ENST00000394258 NPM1P06748 294 aaKnown RBP eCLIP26.08■■□□□ 1.76
RCCD1-201ENST00000394258 DEPDC5O75140 1603 aa26.07■■□□□ 1.76
RCCD1-201ENST00000394258 TET3O43151 1660 aa26.07■■□□□ 1.76
RCCD1-201ENST00000394258 CHGAP10645 457 aaKnown RBP26.07■■□□□ 1.76
RCCD1-201ENST00000394258 CEP152O94986 1710 aa26.07■■□□□ 1.76
RCCD1-201ENST00000394258 SCAF11Q99590 1463 aaKnown RBP26.06■■□□□ 1.76
RCCD1-201ENST00000394258 ADGRF5Q8IZF2 1346 aa26.06■■□□□ 1.76
RCCD1-201ENST00000394258 RRP1P56182 461 aaKnown RBP26.05■■□□□ 1.76
RCCD1-201ENST00000394258 ADAMTS8Q9UP79 889 aa26.04■■□□□ 1.76
RCCD1-201ENST00000394258 EXOC6Q8TAG9 804 aa26.04■■□□□ 1.76
RCCD1-201ENST00000394258 STAC3Q96MF2 364 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms