RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 DIEXFQ68CQ4 756 aaKnown RBP28.23■■■□□ 2.11
RAB5C-202ENST00000393860 L3MBTL2Q969R5 705 aa28.23■■■□□ 2.11
RAB5C-202ENST00000393860 PPRC1Q5VV67 1664 aaKnown RBP28.21■■■□□ 2.11
RAB5C-202ENST00000393860 TEX14Q8IWB6 1497 aa28.2■■■□□ 2.11
RAB5C-202ENST00000393860 DHX29Q7Z478 1369 aaKnown RBP28.2■■■□□ 2.11
RAB5C-202ENST00000393860 RICTORQ6R327 1708 aa28.19■■■□□ 2.1
RAB5C-202ENST00000393860 DEPDC5O75140 1603 aa28.19■■■□□ 2.1
RAB5C-202ENST00000393860 MLH3Q9UHC1 1453 aa28.19■■■□□ 2.1
RAB5C-202ENST00000393860 ABCA6Q8N139 1617 aa28.18■■■□□ 2.1
RAB5C-202ENST00000393860 KIF3BO15066 747 aa28.18■■■□□ 2.1
RAB5C-202ENST00000393860 KIF13AQ9H1H9 1805 aa28.18■■■□□ 2.1
RAB5C-202ENST00000393860 EIF2AK4Q9P2K8 1649 aaKnown RBP28.17■■■□□ 2.1
RAB5C-202ENST00000393860 A2MP01023 1474 aa28.15■■■□□ 2.1
RAB5C-202ENST00000393860 FRMPD1Q5SYB0 1578 aa28.12■■■□□ 2.09
RAB5C-202ENST00000393860 MROH1Q8NDA8 1641 aa28.11■■■□□ 2.09
RAB5C-202ENST00000393860 PLA2R1Q13018 1463 aa28.09■■■□□ 2.09
RAB5C-202ENST00000393860 E9PCH4 1651 aa28.08■■■□□ 2.09
RAB5C-202ENST00000393860 HIRIP3Q9BW71 556 aaPredicted RBP28.08■■■□□ 2.09
RAB5C-202ENST00000393860 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.08
RAB5C-202ENST00000393860 DIP2CQ9Y2E4 1556 aa28.07■■■□□ 2.08
RAB5C-202ENST00000393860 KANK1Q14678 1352 aa28.06■■■□□ 2.08
RAB5C-202ENST00000393860 VWDEQ8N2E2 1590 aa28.06■■■□□ 2.08
RAB5C-202ENST00000393860 YEATS2Q9ULM3 1422 aa28.05■■■□□ 2.08
RAB5C-202ENST00000393860 NBPF8Q3BBV2 869 aa28.04■■■□□ 2.08
RAB5C-202ENST00000393860 CCDC144AA2RUR9 1427 aa28.04■■■□□ 2.08
RAB5C-202ENST00000393860 TET3O43151 1660 aa28.04■■■□□ 2.08
RAB5C-202ENST00000393860 RNF17Q9BXT8 1623 aaKnown RBP28.02■■■□□ 2.08
RAB5C-202ENST00000393860 CEP152O94986 1710 aa28■■■□□ 2.07
RAB5C-202ENST00000393860 ZNF326Q5BKZ1 582 aaKnown RBP27.98■■■□□ 2.07
RAB5C-202ENST00000393860 ZMYM4Q5VZL5 1548 aa27.98■■■□□ 2.07
RAB5C-202ENST00000393860 GGT6Q6P531 493 aa27.97■■■□□ 2.07
RAB5C-202ENST00000393860 ATP10AO60312 1499 aa27.96■■■□□ 2.07
RAB5C-202ENST00000393860 SPHKAPQ2M3C7 1700 aa27.96■■■□□ 2.07
RAB5C-202ENST00000393860 BCORL1Q5H9F3 1711 aa27.95■■■□□ 2.06
RAB5C-202ENST00000393860 KDM2AQ9Y2K7 1162 aa27.92■■■□□ 2.06
RAB5C-202ENST00000393860 RGL3Q3MIN7 710 aa27.92■■■□□ 2.06
RAB5C-202ENST00000393860 EFCAB6Q5THR3 1501 aa27.91■■■□□ 2.06
RAB5C-202ENST00000393860 COL17A1Q9UMD9 1497 aaPredicted RBP27.91■■■□□ 2.06
RAB5C-202ENST00000393860 TRPM2O94759 1503 aa27.9■■■□□ 2.06
RAB5C-202ENST00000393860 DCAF11Q8TEB1 546 aa27.9■■■□□ 2.06
RAB5C-202ENST00000393860 LMTK2Q8IWU2 1503 aa27.88■■■□□ 2.05
RAB5C-202ENST00000393860 CLTCL1P53675 1640 aa27.88■■■□□ 2.05
RAB5C-202ENST00000393860 HSPA5P11021 654 aaKnown RBP27.87■■■□□ 2.05
RAB5C-202ENST00000393860 PTPRTO14522 1441 aa27.87■■■□□ 2.05
RAB5C-202ENST00000393860 ABCC3O15438 1527 aa27.84■■■□□ 2.05
RAB5C-202ENST00000393860 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
RAB5C-202ENST00000393860 WASHC2CQ9Y4E1 1318 aa27.83■■■□□ 2.05
RAB5C-202ENST00000393860 EIF4G2P78344 907 aaKnown RBP eCLIP27.82■■■□□ 2.04
RAB5C-202ENST00000393860 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
RAB5C-202ENST00000393860 MIER1Q8N108 512 aa27.81■■■□□ 2.04
RAB5C-202ENST00000393860 CAMSAP1Q5T5Y3 1602 aa27.8■■■□□ 2.04
RAB5C-202ENST00000393860 CFAP65Q6ZU64 1925 aaKnown RBP27.79■■■□□ 2.04
RAB5C-202ENST00000393860 SPATA31E1Q6ZUB1 1445 aa27.78■■■□□ 2.04
RAB5C-202ENST00000393860 NPATQ14207 1427 aa27.78■■■□□ 2.04
RAB5C-202ENST00000393860 RALGAPBQ86X10 1494 aa27.77■■■□□ 2.04
RAB5C-202ENST00000393860 SIGLEC1Q9BZZ2 1709 aa27.77■■■□□ 2.04
RAB5C-202ENST00000393860 DDX10Q13206 875 aaKnown RBP27.77■■■□□ 2.04
RAB5C-202ENST00000393860 PRAG1Q86YV5 1406 aa27.74■■■□□ 2.03
RAB5C-202ENST00000393860 ARHGEF40Q8TER5 1519 aa27.74■■■□□ 2.03
RAB5C-202ENST00000393860 TRHP20396 242 aaPredicted RBP27.73■■■□□ 2.03
RAB5C-202ENST00000393860 REREQ9P2R6 1566 aa27.73■■■□□ 2.03
RAB5C-202ENST00000393860 ZC3H13Q5T200 1668 aaKnown RBP27.72■■■□□ 2.03
RAB5C-202ENST00000393860 TRPM1Q7Z4N2 1603 aa27.71■■■□□ 2.03
RAB5C-202ENST00000393860 KIF1BO60333 1816 aa27.69■■■□□ 2.02
RAB5C-202ENST00000393860 USP47Q96K76 1375 aa27.68■■■□□ 2.02
RAB5C-202ENST00000393860 MROH2AA6NES4 1674 aa27.68■■■□□ 2.02
RAB5C-202ENST00000393860 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
RAB5C-202ENST00000393860 AGLP35573 1532 aa27.66■■■□□ 2.02
RAB5C-202ENST00000393860 ROCK2O75116 1388 aaKnown RBP27.66■■■□□ 2.02
RAB5C-202ENST00000393860 DNAJC5Q9H3Z4 198 aa27.65■■■□□ 2.02
RAB5C-202ENST00000393860 MLECQ14165 292 aa27.65■■■□□ 2.02
RAB5C-202ENST00000393860 WASHC2AQ641Q2 1341 aa27.64■■■□□ 2.02
RAB5C-202ENST00000393860 CNTLNQ9NXG0 1405 aa27.63■■■□□ 2.01
RAB5C-202ENST00000393860 C11orf95C9JLR9 678 aaPredicted RBP27.63■■■□□ 2.01
RAB5C-202ENST00000393860 MADDQ8WXG6 1647 aa27.62■■■□□ 2.01
RAB5C-202ENST00000393860 SYNMO15061 1565 aa27.61■■■□□ 2.01
RAB5C-202ENST00000393860 CHGAP10645 457 aaKnown RBP27.61■■■□□ 2.01
RAB5C-202ENST00000393860 NBPF1Q3BBV0 1214 aa27.61■■■□□ 2.01
RAB5C-202ENST00000393860 NOS1P29475 1434 aa27.6■■■□□ 2.01
RAB5C-202ENST00000393860 CLTCQ00610 1675 aaKnown RBP27.59■■■□□ 2.01
RAB5C-202ENST00000393860 ARHGAP31Q2M1Z3 1444 aa27.59■■■□□ 2.01
RAB5C-202ENST00000393860 NEURL4Q96JN8 1562 aa27.59■■■□□ 2.01
RAB5C-202ENST00000393860 ADGRB3O60242 1522 aa27.58■■■□□ 2.01
RAB5C-202ENST00000393860 PREX1Q8TCU6 1659 aa27.56■■■□□ 2
RAB5C-202ENST00000393860 IFT172Q9UG01 1749 aa27.55■■■□□ 2
RAB5C-202ENST00000393860 CCDC7Q96M83 1385 aa27.55■■■□□ 2
RAB5C-202ENST00000393860 PIK3C2BO00750 1634 aa27.54■■■□□ 2
RAB5C-202ENST00000393860 POLR1AO95602 1720 aaPredicted RBP27.54■■■□□ 2
RAB5C-202ENST00000393860 FBXO31Q5XUX0 539 aaPredicted RBP27.51■■■□□ 2
RAB5C-202ENST00000393860 GPRASP1Q5JY77 1395 aa27.51■■□□□ 1.99
RAB5C-202ENST00000393860 KIF7Q2M1P5 1343 aa27.51■■□□□ 1.99
RAB5C-202ENST00000393860 ARID4BQ4LE39 1312 aaPredicted RBP27.51■■□□□ 1.99
RAB5C-202ENST00000393860 LAMC1P11047 1609 aa27.5■■□□□ 1.99
RAB5C-202ENST00000393860 ST20-MTHFSA0A0A6YYL1 179 aa27.5■■□□□ 1.99
RAB5C-202ENST00000393860 ADGRF5Q8IZF2 1346 aa27.48■■□□□ 1.99
RAB5C-202ENST00000393860 MYOM2P54296 1465 aa27.48■■□□□ 1.99
RAB5C-202ENST00000393860 PPLO60437 1756 aa27.46■■□□□ 1.99
RAB5C-202ENST00000393860 POLR3GLQ9BT43 218 aa27.46■■□□□ 1.99
RAB5C-202ENST00000393860 PPP6R1Q9UPN7 881 aa27.46■■□□□ 1.99
RAB5C-202ENST00000393860 ERVK-7P63135 1459 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms