RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 ADGRL2O95490 1459 aa31.6■■■□□ 2.65
CDCA4-202ENST00000392590 ZMYM3Q14202 1370 aa31.57■■■□□ 2.64
CDCA4-202ENST00000392590 ERBINQ96RT1 1412 aa31.57■■■□□ 2.64
CDCA4-202ENST00000392590 WASHC2CQ9Y4E1 1318 aa31.56■■■□□ 2.64
CDCA4-202ENST00000392590 EIF2AK4Q9P2K8 1649 aaKnown RBP31.52■■■□□ 2.64
CDCA4-202ENST00000392590 ROCK1Q13464 1354 aa31.51■■■□□ 2.64
CDCA4-202ENST00000392590 CLTCQ00610 1675 aaKnown RBP31.48■■■□□ 2.63
CDCA4-202ENST00000392590 ANKRD50Q9ULJ7 1429 aa31.46■■■□□ 2.63
CDCA4-202ENST00000392590 RNF17Q9BXT8 1623 aaKnown RBP31.46■■■□□ 2.63
CDCA4-202ENST00000392590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.46■■■□□ 2.63
CDCA4-202ENST00000392590 KDM5DQ9BY66 1539 aa31.46■■■□□ 2.63
CDCA4-202ENST00000392590 MROH2AA6NES4 1674 aa31.45■■■□□ 2.63
CDCA4-202ENST00000392590 C3P01024 1663 aa31.45■■■□□ 2.63
CDCA4-202ENST00000392590 FAM135AQ9P2D6 1515 aa31.45■■■□□ 2.62
CDCA4-202ENST00000392590 MROH1Q8NDA8 1641 aa31.39■■■□□ 2.62
CDCA4-202ENST00000392590 NPATQ14207 1427 aa31.39■■■□□ 2.62
CDCA4-202ENST00000392590 KANK1Q14678 1352 aa31.38■■■□□ 2.61
CDCA4-202ENST00000392590 LMTK3Q96Q04 1460 aa31.37■■■□□ 2.61
CDCA4-202ENST00000392590 ABCC3O15438 1527 aa31.36■■■□□ 2.61
CDCA4-202ENST00000392590 FBXO31Q5XUX0 539 aaPredicted RBP31.34■■■□□ 2.61
CDCA4-202ENST00000392590 PRDM15P57071 1507 aaPredicted RBP31.34■■■□□ 2.61
CDCA4-202ENST00000392590 UHRF1BP1Q6BDS2 1440 aa31.34■■■□□ 2.61
CDCA4-202ENST00000392590 PZPP20742 1482 aa31.31■■■□□ 2.6
CDCA4-202ENST00000392590 HSPA2P54652 639 aa31.31■■■□□ 2.6
CDCA4-202ENST00000392590 DEPDC5O75140 1603 aa31.31■■■□□ 2.6
CDCA4-202ENST00000392590 ZC3H13Q5T200 1668 aaKnown RBP31.29■■■□□ 2.6
CDCA4-202ENST00000392590 SETD1BQ9UPS6 1966 aaKnown RBP31.29■■■□□ 2.6
CDCA4-202ENST00000392590 PREX1Q8TCU6 1659 aa31.27■■■□□ 2.6
CDCA4-202ENST00000392590 TNRQ92752 1358 aa31.24■■■□□ 2.59
CDCA4-202ENST00000392590 NAIPQ13075 1403 aa31.24■■■□□ 2.59
CDCA4-202ENST00000392590 VWDEQ8N2E2 1590 aa31.23■■■□□ 2.59
CDCA4-202ENST00000392590 CEP152O94986 1710 aa31.23■■■□□ 2.59
CDCA4-202ENST00000392590 ARHGAP31Q2M1Z3 1444 aa31.22■■■□□ 2.59
CDCA4-202ENST00000392590 LMTK2Q8IWU2 1503 aa31.21■■■□□ 2.59
CDCA4-202ENST00000392590 CAMSAP1Q5T5Y3 1602 aa31.2■■■□□ 2.58
CDCA4-202ENST00000392590 HFM1A2PYH4 1435 aa31.19■■■□□ 2.58
CDCA4-202ENST00000392590 NUP155O75694 1391 aa31.18■■■□□ 2.58
CDCA4-202ENST00000392590 UNC13BO14795 1591 aa31.15■■■□□ 2.58
CDCA4-202ENST00000392590 ERVK-7P63135 1459 aa31.15■■■□□ 2.58
CDCA4-202ENST00000392590 SPATA31D1Q6ZQQ2 1576 aa31.13■■■□□ 2.57
CDCA4-202ENST00000392590 MYO3AQ8NEV4 1616 aa31.12■■■□□ 2.57
CDCA4-202ENST00000392590 A2ML1A8K2U0 1454 aa31.1■■■□□ 2.57
CDCA4-202ENST00000392590 EFCAB6Q5THR3 1501 aa31.09■■■□□ 2.57
CDCA4-202ENST00000392590 GCC2Q8IWJ2 1684 aa31.09■■■□□ 2.57
CDCA4-202ENST00000392590 CEP170BQ9Y4F5 1589 aaPredicted RBP31.09■■■□□ 2.57
CDCA4-202ENST00000392590 NLRP1Q9C000 1473 aa31.08■■■□□ 2.57
CDCA4-202ENST00000392590 TRIM52Q96A61 297 aa31.06■■■□□ 2.56
CDCA4-202ENST00000392590 RPRD2Q5VT52 1461 aaKnown RBP31.04■■■□□ 2.56
CDCA4-202ENST00000392590 IQGAP3Q86VI3 1631 aa31.03■■■□□ 2.56
CDCA4-202ENST00000392590 THEMISQ8N1K5 641 aaPredicted RBP31.03■■■□□ 2.56
CDCA4-202ENST00000392590 TET3O43151 1660 aa31.02■■■□□ 2.56
CDCA4-202ENST00000392590 ZNF142P52746 1687 aaPredicted RBP31.02■■■□□ 2.56
CDCA4-202ENST00000392590 CFAP65Q6ZU64 1925 aaKnown RBP31.01■■■□□ 2.55
CDCA4-202ENST00000392590 NOS1P29475 1434 aa31.01■■■□□ 2.55
CDCA4-202ENST00000392590 DMRT2Q9Y5R5 561 aa30.99■■■□□ 2.55
CDCA4-202ENST00000392590 UGGT1Q9NYU2 1555 aa30.97■■■□□ 2.55
CDCA4-202ENST00000392590 SETD5Q9C0A6 1442 aa30.97■■■□□ 2.55
CDCA4-202ENST00000392590 IDI1Q13907 227 aa30.97■■■□□ 2.55
CDCA4-202ENST00000392590 SLC52A1Q9NWF4 448 aa30.97■■■□□ 2.55
CDCA4-202ENST00000392590 NCKAP5LQ9HCH0 1330 aa30.96■■■□□ 2.55
CDCA4-202ENST00000392590 PLA2R1Q13018 1463 aa30.95■■■□□ 2.54
CDCA4-202ENST00000392590 PKD2Q13563 968 aa30.94■■■□□ 2.54
CDCA4-202ENST00000392590 STAG3Q9UJ98 1225 aa30.93■■■□□ 2.54
CDCA4-202ENST00000392590 SLC4A1APQ9BWU0 796 aaKnown RBP30.92■■■□□ 2.54
CDCA4-202ENST00000392590 SYNMO15061 1565 aa30.91■■■□□ 2.54
CDCA4-202ENST00000392590 STRCQ7RTU9 1775 aa30.9■■■□□ 2.54
CDCA4-202ENST00000392590 E9PCH4 1651 aa30.9■■■□□ 2.54
CDCA4-202ENST00000392590 ACIN1Q9UKV3 1341 aaKnown RBP30.9■■■□□ 2.54
CDCA4-202ENST00000392590 ANKLE2Q86XL3 938 aa30.89■■■□□ 2.54
CDCA4-202ENST00000392590 RAB3GAP2Q9H2M9 1393 aa30.86■■■□□ 2.53
CDCA4-202ENST00000392590 PTPRTO14522 1441 aa30.85■■■□□ 2.53
CDCA4-202ENST00000392590 PIK3C2BO00750 1634 aa30.83■■■□□ 2.53
CDCA4-202ENST00000392590 MPHOSPH9Q99550 1183 aa30.82■■■□□ 2.52
CDCA4-202ENST00000392590 UBR1Q8IWV7 1749 aa30.81■■■□□ 2.52
CDCA4-202ENST00000392590 CHGAP10645 457 aaKnown RBP30.79■■■□□ 2.52
CDCA4-202ENST00000392590 TXNDC2Q86VQ3 553 aa30.78■■■□□ 2.52
CDCA4-202ENST00000392590 TMEM2Q9UHN6 1383 aa30.77■■■□□ 2.52
CDCA4-202ENST00000392590 HRCP23327 699 aa30.77■■■□□ 2.52
CDCA4-202ENST00000392590 EID1Q9Y6B2 187 aa30.77■■■□□ 2.52
CDCA4-202ENST00000392590 ADGRB3O60242 1522 aa30.74■■■□□ 2.51
CDCA4-202ENST00000392590 LTKP29376 864 aa30.74■■■□□ 2.51
CDCA4-202ENST00000392590 FOXD1Q16676 465 aa30.74■■■□□ 2.51
CDCA4-202ENST00000392590 ARHGAP23Q9P227 1491 aa30.74■■■□□ 2.51
CDCA4-202ENST00000392590 SLIT1O75093 1534 aa30.74■■■□□ 2.51
CDCA4-202ENST00000392590 KDM5AP29375 1690 aaKnown RBP30.72■■■□□ 2.51
CDCA4-202ENST00000392590 NPHP4O75161 1426 aaPredicted RBP30.71■■■□□ 2.51
CDCA4-202ENST00000392590 MED14O60244 1454 aa30.69■■■□□ 2.5
CDCA4-202ENST00000392590 SCAF11Q99590 1463 aaKnown RBP30.69■■■□□ 2.5
CDCA4-202ENST00000392590 SPHKAPQ2M3C7 1700 aa30.69■■■□□ 2.5
CDCA4-202ENST00000392590 NEURL4Q96JN8 1562 aa30.69■■■□□ 2.5
CDCA4-202ENST00000392590 HDGFP51858 240 aaKnown RBP30.68■■■□□ 2.5
CDCA4-202ENST00000392590 TRPM2O94759 1503 aa30.67■■■□□ 2.5
CDCA4-202ENST00000392590 POLR1AO95602 1720 aaPredicted RBP30.67■■■□□ 2.5
CDCA4-202ENST00000392590 TMEM131LA2VDJ0 1609 aa30.66■■■□□ 2.5
CDCA4-202ENST00000392590 TRIM26Q12899 539 aaPredicted RBP30.65■■■□□ 2.5
CDCA4-202ENST00000392590 RIMS2Q9UQ26 1411 aa30.62■■■□□ 2.49
CDCA4-202ENST00000392590 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.61■■■□□ 2.49
CDCA4-202ENST00000392590 ZNF335Q9H4Z2 1342 aaPredicted RBP30.6■■■□□ 2.49
CDCA4-202ENST00000392590 PPP1R15AO75807 674 aaPredicted RBP30.6■■■□□ 2.49
CDCA4-202ENST00000392590 ZNF326Q5BKZ1 582 aaKnown RBP30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 347.7 ms