RNA–Protein interactions for RNA: ENST00000392393.7

VNN3-203, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-203ENST00000392393 PDE4CQ08493 712 aa10.56□□□□□ -0.72
VNN3-203ENST00000392393 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
VNN3-203ENST00000392393 CALR3Q96L12 384 aaKnown RBP10.56□□□□□ -0.72
VNN3-203ENST00000392393 REM2Q8IYK8 340 aaPredicted RBP10.55□□□□□ -0.72
VNN3-203ENST00000392393 MAP3K13O43283 966 aa10.55□□□□□ -0.72
VNN3-203ENST00000392393 PRIM1P49642 420 aaKnown RBP10.55□□□□□ -0.72
VNN3-203ENST00000392393 GDPD2Q9HCC8 539 aa10.55□□□□□ -0.72
VNN3-203ENST00000392393 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
VNN3-203ENST00000392393 CHADLQ6NUI6 762 aa10.53□□□□□ -0.72
VNN3-203ENST00000392393 GLMNQ92990 594 aa10.53□□□□□ -0.72
VNN3-203ENST00000392393 IVNS1ABPQ9Y6Y0 642 aa10.52□□□□□ -0.73
VNN3-203ENST00000392393 SSTR3P32745 418 aaPredicted RBP10.51□□□□□ -0.73
VNN3-203ENST00000392393 CACNB1Q02641 598 aaPredicted RBP10.51□□□□□ -0.73
VNN3-203ENST00000392393 PTGDRQ13258 359 aa10.51□□□□□ -0.73
VNN3-203ENST00000392393 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
VNN3-203ENST00000392393 BEGAINQ9BUH8 593 aa10.51□□□□□ -0.73
VNN3-203ENST00000392393 IGSF5Q9NSI5 407 aa10.51□□□□□ -0.73
VNN3-203ENST00000392393 RFC5P40937 340 aa10.51□□□□□ -0.73
VNN3-203ENST00000392393 MDM2Q00987 491 aaPredicted RBP10.51□□□□□ -0.73
VNN3-203ENST00000392393 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.5□□□□□ -0.73
VNN3-203ENST00000392393 RSPH4AQ5TD94 716 aa10.5□□□□□ -0.73
VNN3-203ENST00000392393 SND1Q7KZF4 910 aaKnown RBP eCLIP10.5□□□□□ -0.73
VNN3-203ENST00000392393 PBXIP1Q96AQ6 731 aa10.5□□□□□ -0.73
VNN3-203ENST00000392393 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
VNN3-203ENST00000392393 USTQ9Y2C2 406 aa10.5□□□□□ -0.73
VNN3-203ENST00000392393 TBC1D12O60347 775 aa10.49□□□□□ -0.73
VNN3-203ENST00000392393 CLCN1P35523 988 aa10.49□□□□□ -0.73
VNN3-203ENST00000392393 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
VNN3-203ENST00000392393 FAM177A1Q8N128 213 aaPredicted RBP10.49□□□□□ -0.73
VNN3-203ENST00000392393 MTMR14Q8NCE2 650 aa10.49□□□□□ -0.73
VNN3-203ENST00000392393 CHMP4AQ9BY43 222 aa10.49□□□□□ -0.73
VNN3-203ENST00000392393 GPCPD1Q9NPB8 672 aa10.49□□□□□ -0.73
VNN3-203ENST00000392393 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
VNN3-203ENST00000392393 SRPK2P78362 688 aaKnown RBP10.47□□□□□ -0.73
VNN3-203ENST00000392393 FARP1Q9Y4F1 1045 aaPredicted RBP10.47□□□□□ -0.73
VNN3-203ENST00000392393 RFX1P22670 979 aa10.46□□□□□ -0.74
VNN3-203ENST00000392393 DDX12PQ92771 950 aa10.45□□□□□ -0.74
VNN3-203ENST00000392393 PITPNM1O00562 1244 aa10.44□□□□□ -0.74
VNN3-203ENST00000392393 ABL2P42684 1182 aa10.44□□□□□ -0.74
VNN3-203ENST00000392393 FOXK1P85037 733 aa10.44□□□□□ -0.74
VNN3-203ENST00000392393 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
VNN3-203ENST00000392393 CLK2P49760 499 aaKnown RBP10.44□□□□□ -0.74
VNN3-203ENST00000392393 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
VNN3-203ENST00000392393 ADAMTS19Q8TE59 1207 aa10.43□□□□□ -0.74
VNN3-203ENST00000392393 MYT1LQ9UL68 1186 aa10.43□□□□□ -0.74
VNN3-203ENST00000392393 MAP3K9P80192 1104 aa10.41□□□□□ -0.74
VNN3-203ENST00000392393 FAM217BQ9NTX9 383 aaPredicted RBP10.41□□□□□ -0.74
VNN3-203ENST00000392393 TBC1D2BQ9UPU7 963 aa10.41□□□□□ -0.74
VNN3-203ENST00000392393 PTGER2P43116 358 aa10.4□□□□□ -0.74
VNN3-203ENST00000392393 PLPP6Q8IY26 295 aa10.4□□□□□ -0.75
VNN3-203ENST00000392393 TMEM259Q4ZIN3 620 aa10.39□□□□□ -0.75
VNN3-203ENST00000392393 RBM47A0AV96 593 aaKnown RBP10.38□□□□□ -0.75
VNN3-203ENST00000392393 NLRP7Q8WX94 980 aa10.38□□□□□ -0.75
VNN3-203ENST00000392393 KIAA1522Q9P206 1035 aaPredicted RBP10.38□□□□□ -0.75
VNN3-203ENST00000392393 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
VNN3-203ENST00000392393 PPP2R2DQ66LE6 453 aa10.37□□□□□ -0.75
VNN3-203ENST00000392393 WWC1Q8IX03 1113 aa10.37□□□□□ -0.75
VNN3-203ENST00000392393 HDGFL1Q5TGJ6 251 aa10.36□□□□□ -0.75
VNN3-203ENST00000392393 VRTNQ9H8Y1 702 aa10.36□□□□□ -0.75
VNN3-203ENST00000392393 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
VNN3-203ENST00000392393 GOLGA2Q08379 1002 aa10.36□□□□□ -0.75
VNN3-203ENST00000392393 NPDC1Q9NQX5 325 aaPredicted RBP10.36□□□□□ -0.75
VNN3-203ENST00000392393 TMEM88BA6NKF7 163 aa10.35□□□□□ -0.75
VNN3-203ENST00000392393 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
VNN3-203ENST00000392393 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
VNN3-203ENST00000392393 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
VNN3-203ENST00000392393 TMC2Q8TDI7 906 aa10.33□□□□□ -0.76
VNN3-203ENST00000392393 UPF1Q92900 1129 aaKnown RBP eCLIP10.33□□□□□ -0.76
VNN3-203ENST00000392393 TXNDC2Q86VQ3 553 aa10.33□□□□□ -0.76
VNN3-203ENST00000392393 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
VNN3-203ENST00000392393 TMEM106CQ9BVX2 250 aa10.32□□□□□ -0.76
VNN3-203ENST00000392393 PPP1R12CQ9BZL4 782 aa10.31□□□□□ -0.76
VNN3-203ENST00000392393 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
VNN3-203ENST00000392393 MRRFQ96E11 262 aaKnown RBP10.29□□□□□ -0.76
VNN3-203ENST00000392393 GNEQ9Y223 722 aaKnown RBP10.29□□□□□ -0.76
VNN3-203ENST00000392393 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
VNN3-203ENST00000392393 TRPC6Q9Y210 931 aa10.29□□□□□ -0.76
VNN3-203ENST00000392393 C2orf72A6NCS6 295 aa10.28□□□□□ -0.76
VNN3-203ENST00000392393 SOCS7O14512 581 aa10.28□□□□□ -0.76
VNN3-203ENST00000392393 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
VNN3-203ENST00000392393 CDCA8Q53HL2 280 aa10.27□□□□□ -0.77
VNN3-203ENST00000392393 KIF3CO14782 793 aa10.26□□□□□ -0.77
VNN3-203ENST00000392393 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
VNN3-203ENST00000392393 METTL3Q86U44 580 aaKnown RBP10.25□□□□□ -0.77
VNN3-203ENST00000392393 LMOD1P29536 600 aaPredicted RBP10.25□□□□□ -0.77
VNN3-203ENST00000392393 NOM1Q5C9Z4 860 aaKnown RBP10.25□□□□□ -0.77
VNN3-203ENST00000392393 DNAJC14Q6Y2X3 702 aaPredicted RBP10.25□□□□□ -0.77
VNN3-203ENST00000392393 RIC3Q7Z5B4 369 aa10.25□□□□□ -0.77
VNN3-203ENST00000392393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.77
VNN3-203ENST00000392393 PRM3Q9NNZ6 103 aa10.24□□□□□ -0.77
VNN3-203ENST00000392393 GPR37L1O60883 481 aa10.23□□□□□ -0.77
VNN3-203ENST00000392393 PAK3O75914 559 aaPredicted RBP10.23□□□□□ -0.77
VNN3-203ENST00000392393 ATG7O95352 703 aa10.23□□□□□ -0.77
VNN3-203ENST00000392393 GJD4Q96KN9 370 aaPredicted RBP10.22□□□□□ -0.77
VNN3-203ENST00000392393 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
VNN3-203ENST00000392393 AP1G2O75843 785 aa10.22□□□□□ -0.77
VNN3-203ENST00000392393 QPCTQ16769 361 aa10.22□□□□□ -0.77
VNN3-203ENST00000392393 EVI5O60447 810 aa10.21□□□□□ -0.78
VNN3-203ENST00000392393 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.78
VNN3-203ENST00000392393 SPIRE2Q8WWL2 714 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms