RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 MLH3Q9UHC1 1453 aa17.59■□□□□ 0.41
SPTBN1-203ENST00000389980 KIF3BO15066 747 aa17.59■□□□□ 0.41
SPTBN1-203ENST00000389980 PPP1R15AO75807 674 aaPredicted RBP17.59■□□□□ 0.41
SPTBN1-203ENST00000389980 IQGAP3Q86VI3 1631 aa17.58■□□□□ 0.41
SPTBN1-203ENST00000389980 MAGI2Q86UL8 1455 aa17.58■□□□□ 0.4
SPTBN1-203ENST00000389980 ABCA6Q8N139 1617 aa17.57■□□□□ 0.4
SPTBN1-203ENST00000389980 FRMPD1Q5SYB0 1578 aa17.56■□□□□ 0.4
SPTBN1-203ENST00000389980 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
SPTBN1-203ENST00000389980 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
SPTBN1-203ENST00000389980 TEX14Q8IWB6 1497 aa17.56■□□□□ 0.4
SPTBN1-203ENST00000389980 A2MP01023 1474 aa17.55■□□□□ 0.4
SPTBN1-203ENST00000389980 DEPDC5O75140 1603 aa17.54■□□□□ 0.4
SPTBN1-203ENST00000389980 L3MBTL2Q969R5 705 aa17.53■□□□□ 0.4
SPTBN1-203ENST00000389980 YEATS2Q9ULM3 1422 aa17.53■□□□□ 0.4
SPTBN1-203ENST00000389980 EIF2AK4Q9P2K8 1649 aaKnown RBP17.53■□□□□ 0.4
SPTBN1-203ENST00000389980 DIP2CQ9Y2E4 1556 aa17.52■□□□□ 0.39
SPTBN1-203ENST00000389980 MROH1Q8NDA8 1641 aa17.51■□□□□ 0.39
SPTBN1-203ENST00000389980 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
SPTBN1-203ENST00000389980 COL17A1Q9UMD9 1497 aaPredicted RBP17.49■□□□□ 0.39
SPTBN1-203ENST00000389980 PLA2R1Q13018 1463 aa17.48■□□□□ 0.39
SPTBN1-203ENST00000389980 PRDM15P57071 1507 aaPredicted RBP17.48■□□□□ 0.39
SPTBN1-203ENST00000389980 KANK1Q14678 1352 aa17.48■□□□□ 0.39
SPTBN1-203ENST00000389980 GGT6Q6P531 493 aa17.47■□□□□ 0.39
SPTBN1-203ENST00000389980 E9PCH4 1651 aa17.47■□□□□ 0.39
SPTBN1-203ENST00000389980 VWDEQ8N2E2 1590 aa17.47■□□□□ 0.39
SPTBN1-203ENST00000389980 ZMYM4Q5VZL5 1548 aa17.47■□□□□ 0.39
SPTBN1-203ENST00000389980 RNF17Q9BXT8 1623 aaKnown RBP17.45■□□□□ 0.38
SPTBN1-203ENST00000389980 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
SPTBN1-203ENST00000389980 TET3O43151 1660 aa17.44■□□□□ 0.38
SPTBN1-203ENST00000389980 CEP152O94986 1710 aa17.44■□□□□ 0.38
SPTBN1-203ENST00000389980 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
SPTBN1-203ENST00000389980 BCORL1Q5H9F3 1711 aa17.42■□□□□ 0.38
SPTBN1-203ENST00000389980 NBPF8Q3BBV2 869 aa17.42■□□□□ 0.38
SPTBN1-203ENST00000389980 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
SPTBN1-203ENST00000389980 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
SPTBN1-203ENST00000389980 ATP10AO60312 1499 aa17.4■□□□□ 0.38
SPTBN1-203ENST00000389980 MYT1Q01538 1121 aa17.39■□□□□ 0.37
SPTBN1-203ENST00000389980 DIEXFQ68CQ4 756 aaKnown RBP17.39■□□□□ 0.37
SPTBN1-203ENST00000389980 SPHKAPQ2M3C7 1700 aa17.39■□□□□ 0.37
SPTBN1-203ENST00000389980 RGL3Q3MIN7 710 aa17.39■□□□□ 0.37
SPTBN1-203ENST00000389980 ZNF326Q5BKZ1 582 aaKnown RBP17.38■□□□□ 0.37
SPTBN1-203ENST00000389980 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
SPTBN1-203ENST00000389980 WASHC2CQ9Y4E1 1318 aa17.37■□□□□ 0.37
SPTBN1-203ENST00000389980 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
SPTBN1-203ENST00000389980 LMTK2Q8IWU2 1503 aa17.36■□□□□ 0.37
SPTBN1-203ENST00000389980 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
SPTBN1-203ENST00000389980 SIGLEC1Q9BZZ2 1709 aa17.36■□□□□ 0.37
SPTBN1-203ENST00000389980 PTPRTO14522 1441 aa17.36■□□□□ 0.37
SPTBN1-203ENST00000389980 ABCC3O15438 1527 aa17.35■□□□□ 0.37
SPTBN1-203ENST00000389980 TRPM2O94759 1503 aa17.35■□□□□ 0.37
SPTBN1-203ENST00000389980 CLTCL1P53675 1640 aa17.33■□□□□ 0.36
SPTBN1-203ENST00000389980 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
SPTBN1-203ENST00000389980 ARHGEF40Q8TER5 1519 aa17.32■□□□□ 0.36
SPTBN1-203ENST00000389980 NPATQ14207 1427 aa17.32■□□□□ 0.36
SPTBN1-203ENST00000389980 CAMSAP1Q5T5Y3 1602 aa17.31■□□□□ 0.36
SPTBN1-203ENST00000389980 REREQ9P2R6 1566 aa17.3■□□□□ 0.36
SPTBN1-203ENST00000389980 MLECQ14165 292 aa17.3■□□□□ 0.36
SPTBN1-203ENST00000389980 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
SPTBN1-203ENST00000389980 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
SPTBN1-203ENST00000389980 UHRF1BP1Q6BDS2 1440 aa17.27■□□□□ 0.36
SPTBN1-203ENST00000389980 AGLP35573 1532 aa17.27■□□□□ 0.36
SPTBN1-203ENST00000389980 ZC3H13Q5T200 1668 aaKnown RBP17.26■□□□□ 0.35
SPTBN1-203ENST00000389980 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
SPTBN1-203ENST00000389980 KIF1BO60333 1816 aa17.23■□□□□ 0.35
SPTBN1-203ENST00000389980 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
SPTBN1-203ENST00000389980 PRAG1Q86YV5 1406 aa17.22■□□□□ 0.35
SPTBN1-203ENST00000389980 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
SPTBN1-203ENST00000389980 MROH2AA6NES4 1674 aa17.22■□□□□ 0.35
SPTBN1-203ENST00000389980 CLTCQ00610 1675 aaKnown RBP17.22■□□□□ 0.35
SPTBN1-203ENST00000389980 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
SPTBN1-203ENST00000389980 NOS1P29475 1434 aa17.21■□□□□ 0.35
SPTBN1-203ENST00000389980 ARHGAP31Q2M1Z3 1444 aa17.21■□□□□ 0.35
SPTBN1-203ENST00000389980 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
SPTBN1-203ENST00000389980 SYNMO15061 1565 aa17.2■□□□□ 0.34
SPTBN1-203ENST00000389980 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
SPTBN1-203ENST00000389980 TRPM1Q7Z4N2 1603 aa17.19■□□□□ 0.34
SPTBN1-203ENST00000389980 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
SPTBN1-203ENST00000389980 NBPF1Q3BBV0 1214 aa17.19■□□□□ 0.34
SPTBN1-203ENST00000389980 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
SPTBN1-203ENST00000389980 PREX1Q8TCU6 1659 aa17.17■□□□□ 0.34
SPTBN1-203ENST00000389980 ROCK2O75116 1388 aaKnown RBP17.17■□□□□ 0.34
SPTBN1-203ENST00000389980 USP47Q96K76 1375 aa17.17■□□□□ 0.34
SPTBN1-203ENST00000389980 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
SPTBN1-203ENST00000389980 MIER1Q8N108 512 aa17.16■□□□□ 0.34
SPTBN1-203ENST00000389980 PIK3C2BO00750 1634 aa17.15■□□□□ 0.34
SPTBN1-203ENST00000389980 ADGRB3O60242 1522 aa17.15■□□□□ 0.34
SPTBN1-203ENST00000389980 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
SPTBN1-203ENST00000389980 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
SPTBN1-203ENST00000389980 IDI1Q13907 227 aa17.15■□□□□ 0.34
SPTBN1-203ENST00000389980 NEURL4Q96JN8 1562 aa17.15■□□□□ 0.34
SPTBN1-203ENST00000389980 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
SPTBN1-203ENST00000389980 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
SPTBN1-203ENST00000389980 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
SPTBN1-203ENST00000389980 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
SPTBN1-203ENST00000389980 ADGRF5Q8IZF2 1346 aa17.12■□□□□ 0.33
SPTBN1-203ENST00000389980 MYO5BQ9ULV0 1848 aa17.11■□□□□ 0.33
SPTBN1-203ENST00000389980 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
SPTBN1-203ENST00000389980 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
SPTBN1-203ENST00000389980 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
SPTBN1-203ENST00000389980 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms