RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
PKP4-201ENST00000389757 PHLDB1Q86UU1 1377 aa13.08□□□□□ -0.32
PKP4-201ENST00000389757 EVA1CP58658 441 aa13.07□□□□□ -0.32
PKP4-201ENST00000389757 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
PKP4-201ENST00000389757 TOP2BQ02880 1626 aa13.07□□□□□ -0.32
PKP4-201ENST00000389757 ZRSR1Q15695 479 aaKnown RBP13.07□□□□□ -0.32
PKP4-201ENST00000389757 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
PKP4-201ENST00000389757 USP47Q96K76 1375 aa13.06□□□□□ -0.32
PKP4-201ENST00000389757 CCDC146Q8IYE0 955 aa13.06□□□□□ -0.32
PKP4-201ENST00000389757 EFCAB5A4FU69 1503 aa13.06□□□□□ -0.32
PKP4-201ENST00000389757 PSME1Q06323 249 aa13.05□□□□□ -0.32
PKP4-201ENST00000389757 LAMC3Q9Y6N6 1575 aa13.05□□□□□ -0.32
PKP4-201ENST00000389757 ITPRIPQ8IWB1 547 aa13.05□□□□□ -0.32
PKP4-201ENST00000389757 RCAN3Q9UKA8 241 aa13.05□□□□□ -0.32
PKP4-201ENST00000389757 NAP1L2Q9ULW6 460 aaPredicted RBP13.05□□□□□ -0.32
PKP4-201ENST00000389757 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
PKP4-201ENST00000389757 B4GALNT3Q6L9W6 998 aa13.05□□□□□ -0.32
PKP4-201ENST00000389757 APBB1O00213 710 aa13.04□□□□□ -0.32
PKP4-201ENST00000389757 ATF3P18847 181 aa13.04□□□□□ -0.32
PKP4-201ENST00000389757 TAOK2Q9UL54 1235 aa13.04□□□□□ -0.32
PKP4-201ENST00000389757 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
PKP4-201ENST00000389757 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
PKP4-201ENST00000389757 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
PKP4-201ENST00000389757 CENPJQ9HC77 1338 aaPredicted RBP13.03□□□□□ -0.32
PKP4-201ENST00000389757 PLEKHH2Q8IVE3 1493 aa13.03□□□□□ -0.32
PKP4-201ENST00000389757 MYBBP1AQ9BQG0 1328 aaKnown RBP13.03□□□□□ -0.32
PKP4-201ENST00000389757 MCCP23508 829 aa13.02□□□□□ -0.32
PKP4-201ENST00000389757 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.32
PKP4-201ENST00000389757 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
PKP4-201ENST00000389757 ARAP1Q96P48 1450 aa13.02□□□□□ -0.33
PKP4-201ENST00000389757 CHMP3Q9Y3E7 222 aa13.01□□□□□ -0.33
PKP4-201ENST00000389757 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
PKP4-201ENST00000389757 TROQ12816 1431 aaPredicted RBP13.01□□□□□ -0.33
PKP4-201ENST00000389757 RWDD1Q9H446 243 aaPredicted RBP13.01□□□□□ -0.33
PKP4-201ENST00000389757 KIAA0586Q9BVV6 1533 aa13□□□□□ -0.33
PKP4-201ENST00000389757 HSP90AB1P08238 724 aaKnown RBP13□□□□□ -0.33
PKP4-201ENST00000389757 SCAPERQ9BY12 1400 aa12.99□□□□□ -0.33
PKP4-201ENST00000389757 GTF2E1P29083 439 aaPredicted RBP12.99□□□□□ -0.33
PKP4-201ENST00000389757 SLC4A10Q6U841 1118 aa12.99□□□□□ -0.33
PKP4-201ENST00000389757 GORABQ5T7V8 394 aa12.99□□□□□ -0.33
PKP4-201ENST00000389757 MEX3CQ5U5Q3 659 aaKnown RBP12.99□□□□□ -0.33
PKP4-201ENST00000389757 TXNDC2Q86VQ3 553 aa12.99□□□□□ -0.33
PKP4-201ENST00000389757 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
PKP4-201ENST00000389757 TPRNQ4KMQ1 711 aa12.99□□□□□ -0.33
PKP4-201ENST00000389757 HMMRO75330 724 aa12.98□□□□□ -0.33
PKP4-201ENST00000389757 TEFQ10587 303 aa12.98□□□□□ -0.33
PKP4-201ENST00000389757 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
PKP4-201ENST00000389757 KIAA1211Q6ZU35 1233 aa12.98□□□□□ -0.33
PKP4-201ENST00000389757 ISY1Q9ULR0 285 aaKnown RBP12.98□□□□□ -0.33
PKP4-201ENST00000389757 RRP7AQ9Y3A4 280 aaKnown RBP12.97□□□□□ -0.33
PKP4-201ENST00000389757 EHBP1L1Q8N3D4 1523 aa12.97□□□□□ -0.33
PKP4-201ENST00000389757 RAPGEF3O95398 923 aa12.97□□□□□ -0.33
PKP4-201ENST00000389757 THEMISQ8N1K5 641 aaPredicted RBP12.96□□□□□ -0.33
PKP4-201ENST00000389757 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
PKP4-201ENST00000389757 HECW1Q76N89 1606 aa12.96□□□□□ -0.34
PKP4-201ENST00000389757 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
PKP4-201ENST00000389757 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
PKP4-201ENST00000389757 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
PKP4-201ENST00000389757 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
PKP4-201ENST00000389757 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
PKP4-201ENST00000389757 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
PKP4-201ENST00000389757 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
PKP4-201ENST00000389757 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
PKP4-201ENST00000389757 CLUAP1Q96AJ1 413 aa12.94□□□□□ -0.34
PKP4-201ENST00000389757 G3V3G9 751 aa12.94□□□□□ -0.34
PKP4-201ENST00000389757 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
PKP4-201ENST00000389757 HSCBQ8IWL3 235 aa12.94□□□□□ -0.34
PKP4-201ENST00000389757 PMFBP1Q8TBY8 1022 aa12.94□□□□□ -0.34
PKP4-201ENST00000389757 PROSER2Q86WR7 435 aaPredicted RBP12.94□□□□□ -0.34
PKP4-201ENST00000389757 SLC52A1Q9NWF4 448 aa12.92□□□□□ -0.34
PKP4-201ENST00000389757 PRKRIP1Q9H875 184 aaPredicted RBP12.92□□□□□ -0.34
PKP4-201ENST00000389757 ERICH6BQ5W0A0 696 aa12.92□□□□□ -0.34
PKP4-201ENST00000389757 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
PKP4-201ENST00000389757 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
PKP4-201ENST00000389757 CFAP70Q5T0N1 1121 aa12.91□□□□□ -0.34
PKP4-201ENST00000389757 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
PKP4-201ENST00000389757 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
PKP4-201ENST00000389757 IQGAP2Q13576 1575 aa12.9□□□□□ -0.34
PKP4-201ENST00000389757 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
PKP4-201ENST00000389757 GOLGA6L4A6NEF3 574 aa12.9□□□□□ -0.34
PKP4-201ENST00000389757 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.34
PKP4-201ENST00000389757 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
PKP4-201ENST00000389757 MSH5O43196 834 aa12.9□□□□□ -0.35
PKP4-201ENST00000389757 NLRP6P59044 892 aa12.89□□□□□ -0.35
PKP4-201ENST00000389757 TRIM44Q96DX7 344 aaPredicted RBP12.89□□□□□ -0.35
PKP4-201ENST00000389757 E9PSI1 815 aa12.89□□□□□ -0.35
PKP4-201ENST00000389757 FRAT2O75474 233 aaPredicted RBP12.88□□□□□ -0.35
PKP4-201ENST00000389757 GRIN2AQ12879 1464 aa12.88□□□□□ -0.35
PKP4-201ENST00000389757 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
PKP4-201ENST00000389757 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
PKP4-201ENST00000389757 ANKLE2Q86XL3 938 aa12.88□□□□□ -0.35
PKP4-201ENST00000389757 NLRP2Q9NX02 1062 aa12.88□□□□□ -0.35
PKP4-201ENST00000389757 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
PKP4-201ENST00000389757 GGNBP2Q9H3C7 697 aa12.87□□□□□ -0.35
PKP4-201ENST00000389757 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
PKP4-201ENST00000389757 NEXNQ0ZGT2 675 aa12.87□□□□□ -0.35
PKP4-201ENST00000389757 CD109Q6YHK3 1445 aa12.87□□□□□ -0.35
PKP4-201ENST00000389757 APAF1O14727 1248 aa12.86□□□□□ -0.35
PKP4-201ENST00000389757 GNL2Q13823 731 aaKnown RBP12.86□□□□□ -0.35
PKP4-201ENST00000389757 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms