RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 PPRC1Q5VV67 1664 aaKnown RBP29.19■■■□□ 2.26
CPNE9-202ENST00000383831 DEPDC5O75140 1603 aa29.19■■■□□ 2.26
CPNE9-202ENST00000383831 EIF2AK4Q9P2K8 1649 aaKnown RBP29.19■■■□□ 2.26
CPNE9-202ENST00000383831 RICTORQ6R327 1708 aa29.17■■■□□ 2.26
CPNE9-202ENST00000383831 TSPOAP1O95153 1857 aa29.17■■■□□ 2.26
CPNE9-202ENST00000383831 TEX14Q8IWB6 1497 aa29.16■■■□□ 2.26
CPNE9-202ENST00000383831 RAPGEF3O95398 923 aa29.16■■■□□ 2.26
CPNE9-202ENST00000383831 KIF13AQ9H1H9 1805 aa29.15■■■□□ 2.26
CPNE9-202ENST00000383831 L3MBTL2Q969R5 705 aa29.13■■■□□ 2.25
CPNE9-202ENST00000383831 A2MP01023 1474 aa29.13■■■□□ 2.25
CPNE9-202ENST00000383831 ABCA6Q8N139 1617 aa29.13■■■□□ 2.25
CPNE9-202ENST00000383831 FRMPD1Q5SYB0 1578 aa29.1■■■□□ 2.25
CPNE9-202ENST00000383831 KIF3BO15066 747 aa29.09■■■□□ 2.25
CPNE9-202ENST00000383831 MROH1Q8NDA8 1641 aa29.09■■■□□ 2.25
CPNE9-202ENST00000383831 VWDEQ8N2E2 1590 aa29.08■■■□□ 2.25
CPNE9-202ENST00000383831 PRDM15P57071 1507 aaPredicted RBP29.08■■■□□ 2.25
CPNE9-202ENST00000383831 DIEXFQ68CQ4 756 aaKnown RBP29.08■■■□□ 2.25
CPNE9-202ENST00000383831 DIP2CQ9Y2E4 1556 aa29.05■■■□□ 2.24
CPNE9-202ENST00000383831 PLA2R1Q13018 1463 aa29.05■■■□□ 2.24
CPNE9-202ENST00000383831 KANK1Q14678 1352 aa29.03■■■□□ 2.24
CPNE9-202ENST00000383831 RNF17Q9BXT8 1623 aaKnown RBP29.03■■■□□ 2.24
CPNE9-202ENST00000383831 E9PCH4 1651 aa29.02■■■□□ 2.24
CPNE9-202ENST00000383831 TET3O43151 1660 aa29.02■■■□□ 2.24
CPNE9-202ENST00000383831 ZMYM4Q5VZL5 1548 aa29.01■■■□□ 2.23
CPNE9-202ENST00000383831 BCORL1Q5H9F3 1711 aa29■■■□□ 2.23
CPNE9-202ENST00000383831 ATP10AO60312 1499 aa28.99■■■□□ 2.23
CPNE9-202ENST00000383831 CCDC144AA2RUR9 1427 aa28.99■■■□□ 2.23
CPNE9-202ENST00000383831 YEATS2Q9ULM3 1422 aa28.98■■■□□ 2.23
CPNE9-202ENST00000383831 NBPF8Q3BBV2 869 aa28.93■■■□□ 2.22
CPNE9-202ENST00000383831 LMTK2Q8IWU2 1503 aa28.91■■■□□ 2.22
CPNE9-202ENST00000383831 CEP152O94986 1710 aa28.9■■■□□ 2.22
CPNE9-202ENST00000383831 SPHKAPQ2M3C7 1700 aa28.9■■■□□ 2.22
CPNE9-202ENST00000383831 EFCAB6Q5THR3 1501 aa28.89■■■□□ 2.21
CPNE9-202ENST00000383831 PTPRTO14522 1441 aa28.88■■■□□ 2.21
CPNE9-202ENST00000383831 TRPM2O94759 1503 aa28.88■■■□□ 2.21
CPNE9-202ENST00000383831 GGT6Q6P531 493 aa28.85■■■□□ 2.21
CPNE9-202ENST00000383831 COL17A1Q9UMD9 1497 aaPredicted RBP28.85■■■□□ 2.21
CPNE9-202ENST00000383831 HIRIP3Q9BW71 556 aaPredicted RBP28.84■■■□□ 2.21
CPNE9-202ENST00000383831 UHRF1BP1Q6BDS2 1440 aa28.84■■■□□ 2.21
CPNE9-202ENST00000383831 ABCC3O15438 1527 aa28.81■■■□□ 2.2
CPNE9-202ENST00000383831 CLTCL1P53675 1640 aa28.81■■■□□ 2.2
CPNE9-202ENST00000383831 DCAF11Q8TEB1 546 aa28.79■■■□□ 2.2
CPNE9-202ENST00000383831 ZNF326Q5BKZ1 582 aaKnown RBP28.78■■■□□ 2.2
CPNE9-202ENST00000383831 REREQ9P2R6 1566 aa28.78■■■□□ 2.2
CPNE9-202ENST00000383831 RGL3Q3MIN7 710 aa28.76■■■□□ 2.19
CPNE9-202ENST00000383831 KDM2AQ9Y2K7 1162 aa28.76■■■□□ 2.19
CPNE9-202ENST00000383831 HSPA5P11021 654 aaKnown RBP28.75■■■□□ 2.19
CPNE9-202ENST00000383831 SPATA31E1Q6ZUB1 1445 aa28.75■■■□□ 2.19
CPNE9-202ENST00000383831 WASHC2CQ9Y4E1 1318 aa28.75■■■□□ 2.19
CPNE9-202ENST00000383831 CAMSAP1Q5T5Y3 1602 aa28.74■■■□□ 2.19
CPNE9-202ENST00000383831 EIF4G2P78344 907 aaKnown RBP eCLIP28.74■■■□□ 2.19
CPNE9-202ENST00000383831 ARHGEF40Q8TER5 1519 aa28.73■■■□□ 2.19
CPNE9-202ENST00000383831 NPATQ14207 1427 aa28.73■■■□□ 2.19
CPNE9-202ENST00000383831 ZC3H13Q5T200 1668 aaKnown RBP28.73■■■□□ 2.19
CPNE9-202ENST00000383831 RALGAPBQ86X10 1494 aa28.72■■■□□ 2.19
CPNE9-202ENST00000383831 AGLP35573 1532 aa28.7■■■□□ 2.19
CPNE9-202ENST00000383831 UGGT1Q9NYU2 1555 aa28.7■■■□□ 2.18
CPNE9-202ENST00000383831 PRAG1Q86YV5 1406 aa28.69■■■□□ 2.18
CPNE9-202ENST00000383831 SIGLEC1Q9BZZ2 1709 aa28.68■■■□□ 2.18
CPNE9-202ENST00000383831 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
CPNE9-202ENST00000383831 NEURL4Q96JN8 1562 aa28.64■■■□□ 2.18
CPNE9-202ENST00000383831 TRPM1Q7Z4N2 1603 aa28.64■■■□□ 2.17
CPNE9-202ENST00000383831 MIER1Q8N108 512 aa28.63■■■□□ 2.17
CPNE9-202ENST00000383831 CFAP65Q6ZU64 1925 aaKnown RBP28.63■■■□□ 2.17
CPNE9-202ENST00000383831 ARHGAP31Q2M1Z3 1444 aa28.63■■■□□ 2.17
CPNE9-202ENST00000383831 KIF1BO60333 1816 aa28.62■■■□□ 2.17
CPNE9-202ENST00000383831 CNTLNQ9NXG0 1405 aa28.62■■■□□ 2.17
CPNE9-202ENST00000383831 TRHP20396 242 aaPredicted RBP28.6■■■□□ 2.17
CPNE9-202ENST00000383831 DDX10Q13206 875 aaKnown RBP28.59■■■□□ 2.17
CPNE9-202ENST00000383831 NOS1P29475 1434 aa28.59■■■□□ 2.17
CPNE9-202ENST00000383831 USP47Q96K76 1375 aa28.58■■■□□ 2.17
CPNE9-202ENST00000383831 MROH2AA6NES4 1674 aa28.57■■■□□ 2.16
CPNE9-202ENST00000383831 CARD11Q9BXL7 1154 aa28.56■■■□□ 2.16
CPNE9-202ENST00000383831 ROCK2O75116 1388 aaKnown RBP28.55■■■□□ 2.16
CPNE9-202ENST00000383831 MADDQ8WXG6 1647 aa28.55■■■□□ 2.16
CPNE9-202ENST00000383831 SYNMO15061 1565 aa28.55■■■□□ 2.16
CPNE9-202ENST00000383831 ADGRB3O60242 1522 aa28.54■■■□□ 2.16
CPNE9-202ENST00000383831 PPP6R1Q9UPN7 881 aa28.52■■■□□ 2.16
CPNE9-202ENST00000383831 WASHC2AQ641Q2 1341 aa28.52■■■□□ 2.16
CPNE9-202ENST00000383831 PIK3C2BO00750 1634 aa28.52■■■□□ 2.16
CPNE9-202ENST00000383831 PREX1Q8TCU6 1659 aa28.5■■■□□ 2.15
CPNE9-202ENST00000383831 STAC3Q96MF2 364 aa28.5■■■□□ 2.15
CPNE9-202ENST00000383831 GPRASP1Q5JY77 1395 aa28.5■■■□□ 2.15
CPNE9-202ENST00000383831 CLTCQ00610 1675 aaKnown RBP28.5■■■□□ 2.15
CPNE9-202ENST00000383831 IFT172Q9UG01 1749 aa28.49■■■□□ 2.15
CPNE9-202ENST00000383831 LAMC1P11047 1609 aa28.49■■■□□ 2.15
CPNE9-202ENST00000383831 NBPF1Q3BBV0 1214 aa28.49■■■□□ 2.15
CPNE9-202ENST00000383831 C11orf95C9JLR9 678 aaPredicted RBP28.48■■■□□ 2.15
CPNE9-202ENST00000383831 POLR1AO95602 1720 aaPredicted RBP28.47■■■□□ 2.15
CPNE9-202ENST00000383831 MLECQ14165 292 aa28.47■■■□□ 2.15
CPNE9-202ENST00000383831 MYOM2P54296 1465 aa28.46■■■□□ 2.15
CPNE9-202ENST00000383831 CCDC7Q96M83 1385 aa28.45■■■□□ 2.14
CPNE9-202ENST00000383831 CHGAP10645 457 aaKnown RBP28.44■■■□□ 2.14
CPNE9-202ENST00000383831 ERVK-7P63135 1459 aa28.41■■■□□ 2.14
CPNE9-202ENST00000383831 KIF7Q2M1P5 1343 aa28.39■■■□□ 2.14
CPNE9-202ENST00000383831 PPLO60437 1756 aa28.39■■■□□ 2.14
CPNE9-202ENST00000383831 FBXO31Q5XUX0 539 aaPredicted RBP28.39■■■□□ 2.13
CPNE9-202ENST00000383831 KIAA1210Q9ULL0 1709 aa28.38■■■□□ 2.13
CPNE9-202ENST00000383831 ST20-MTHFSA0A0A6YYL1 179 aa28.37■■■□□ 2.13
CPNE9-202ENST00000383831 SLC52A1Q9NWF4 448 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms