RNA–Protein interactions for RNA: ENST00000382998.8

CTIF-202, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 1 (best) BASIC

Gene CTIF, Length 4,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-202ENST00000382998 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
CTIF-202ENST00000382998 PAK3O75914 559 aaPredicted RBP17.44■□□□□ 0.38
CTIF-202ENST00000382998 BECN1Q14457 450 aa17.44■□□□□ 0.38
CTIF-202ENST00000382998 FOXD1Q16676 465 aa17.44■□□□□ 0.38
CTIF-202ENST00000382998 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.384e-7■■■■■ 40.3
CTIF-202ENST00000382998 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
CTIF-202ENST00000382998 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
CTIF-202ENST00000382998 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
CTIF-202ENST00000382998 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
CTIF-202ENST00000382998 CUX1P39880 1505 aa17.42■□□□□ 0.38
CTIF-202ENST00000382998 PKD2Q13563 968 aa17.41■□□□□ 0.38
CTIF-202ENST00000382998 CCDC18Q5T9S5 1454 aa17.39■□□□□ 0.38
CTIF-202ENST00000382998 DCAF11Q8TEB1 546 aa17.39■□□□□ 0.37
CTIF-202ENST00000382998 HDAC5Q9UQL6 1122 aa17.39■□□□□ 0.37
CTIF-202ENST00000382998 CCDC66A2RUB6 948 aa17.39■□□□□ 0.37
CTIF-202ENST00000382998 RSPH4AQ5TD94 716 aa17.39■□□□□ 0.37
CTIF-202ENST00000382998 STK26Q9P289 416 aa17.38■□□□□ 0.37
CTIF-202ENST00000382998 KIF21BO75037 1637 aa17.38■□□□□ 0.37
CTIF-202ENST00000382998 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
CTIF-202ENST00000382998 MRS2Q9HD23 443 aa17.38■□□□□ 0.37
CTIF-202ENST00000382998 NUP155O75694 1391 aa17.38■□□□□ 0.37
CTIF-202ENST00000382998 GZF1Q9H116 711 aaPredicted RBP17.36■□□□□ 0.37
CTIF-202ENST00000382998 CGNQ9P2M7 1197 aaKnown RBP17.36■□□□□ 0.37
CTIF-202ENST00000382998 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
CTIF-202ENST00000382998 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
CTIF-202ENST00000382998 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
CTIF-202ENST00000382998 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
CTIF-202ENST00000382998 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
CTIF-202ENST00000382998 SECISBP2LQ93073 1101 aaKnown RBP17.33■□□□□ 0.37
CTIF-202ENST00000382998 GOLGA6L6A8MZA4 724 aa17.33■□□□□ 0.36
CTIF-202ENST00000382998 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.36
CTIF-202ENST00000382998 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
CTIF-202ENST00000382998 SENP3-EIF4A1A0A087X0R7 540 aa17.32■□□□□ 0.36
CTIF-202ENST00000382998 CLSTN1O94985 981 aa17.32■□□□□ 0.36
CTIF-202ENST00000382998 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
CTIF-202ENST00000382998 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
CTIF-202ENST00000382998 AFAP1Q8N556 730 aa17.31■□□□□ 0.36
CTIF-202ENST00000382998 ZNF644Q9H582 1327 aaPredicted RBP17.3■□□□□ 0.36
CTIF-202ENST00000382998 TEX2Q8IWB9 1127 aa17.3■□□□□ 0.36
CTIF-202ENST00000382998 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.3■□□□□ 0.36
CTIF-202ENST00000382998 ZNF592Q92610 1267 aa17.29■□□□□ 0.36
CTIF-202ENST00000382998 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
CTIF-202ENST00000382998 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
CTIF-202ENST00000382998 GOLGA6L1Q8N7Z2 621 aa17.28■□□□□ 0.36
CTIF-202ENST00000382998 C11orf95C9JLR9 678 aaPredicted RBP17.28■□□□□ 0.36
CTIF-202ENST00000382998 SOX12O15370 315 aa17.27■□□□□ 0.35
CTIF-202ENST00000382998 GOLGA6L22H0YM25 854 aa17.27■□□□□ 0.35
CTIF-202ENST00000382998 SSR1P43307 286 aaKnown RBP17.25■□□□□ 0.35
CTIF-202ENST00000382998 ZNF622Q969S3 477 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTIF-202ENST00000382998 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
CTIF-202ENST00000382998 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
CTIF-202ENST00000382998 NFKBIBQ15653 356 aa17.24■□□□□ 0.35
CTIF-202ENST00000382998 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
CTIF-202ENST00000382998 DNAJC2Q99543 621 aaKnown RBP17.23■□□□□ 0.35
CTIF-202ENST00000382998 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
CTIF-202ENST00000382998 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
CTIF-202ENST00000382998 KIAA1211Q6ZU35 1233 aa17.23■□□□□ 0.35
CTIF-202ENST00000382998 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
CTIF-202ENST00000382998 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
CTIF-202ENST00000382998 TNNT1P13805 278 aa17.21■□□□□ 0.35
CTIF-202ENST00000382998 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
CTIF-202ENST00000382998 NUTM2FA1L443 756 aa17.2■□□□□ 0.34
CTIF-202ENST00000382998 PHLDB1Q86UU1 1377 aa17.19■□□□□ 0.34
CTIF-202ENST00000382998 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
CTIF-202ENST00000382998 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
CTIF-202ENST00000382998 HSPA5P11021 654 aaKnown RBP17.18■□□□□ 0.34
CTIF-202ENST00000382998 PPP4R3BQ5MIZ7 849 aa17.18■□□□□ 0.34
CTIF-202ENST00000382998 KCNJ4P48050 445 aa17.18■□□□□ 0.34
CTIF-202ENST00000382998 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
CTIF-202ENST00000382998 GPATCH11Q8N954 259 aa17.17■□□□□ 0.34
CTIF-202ENST00000382998 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
CTIF-202ENST00000382998 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
CTIF-202ENST00000382998 TSPYL1Q9H0U9 437 aa17.17■□□□□ 0.34
CTIF-202ENST00000382998 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
CTIF-202ENST00000382998 SMAP1Q8IYB5 467 aaPredicted RBP17.16■□□□□ 0.34
CTIF-202ENST00000382998 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
CTIF-202ENST00000382998 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTIF-202ENST00000382998 KIAA0586Q9BVV6 1533 aa17.14■□□□□ 0.34
CTIF-202ENST00000382998 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.34
CTIF-202ENST00000382998 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
CTIF-202ENST00000382998 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
CTIF-202ENST00000382998 BANK1Q8NDB2 785 aa17.13■□□□□ 0.33
CTIF-202ENST00000382998 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
CTIF-202ENST00000382998 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
CTIF-202ENST00000382998 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
CTIF-202ENST00000382998 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
CTIF-202ENST00000382998 LETM1O95202 739 aaPredicted RBP17.1■□□□□ 0.33
CTIF-202ENST00000382998 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
CTIF-202ENST00000382998 ESPNB1AK53 854 aa17.1■□□□□ 0.33
CTIF-202ENST00000382998 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
CTIF-202ENST00000382998 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
CTIF-202ENST00000382998 UACAQ9BZF9 1416 aa17.09■□□□□ 0.33
CTIF-202ENST00000382998 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
CTIF-202ENST00000382998 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
CTIF-202ENST00000382998 ARID4AP29374 1257 aaPredicted RBP17.08■□□□□ 0.32
CTIF-202ENST00000382998 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.32
CTIF-202ENST00000382998 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
CTIF-202ENST00000382998 TICAM2Q86XR7 235 aa17.07■□□□□ 0.32
CTIF-202ENST00000382998 GTF2E1P29083 439 aaPredicted RBP17.07■□□□□ 0.32
CTIF-202ENST00000382998 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms