RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 PRDM4Q9UKN5 801 aa24.25■■□□□ 1.47
SMARCD1-201ENST00000381513 BICRAQ9NZM4 1560 aa24.24■■□□□ 1.47
SMARCD1-201ENST00000381513 SLC24A1O60721 1099 aa24.23■■□□□ 1.47
SMARCD1-201ENST00000381513 HECW1Q76N89 1606 aa24.23■■□□□ 1.47
SMARCD1-201ENST00000381513 KDM6BO15054 1643 aa24.22■■□□□ 1.47
SMARCD1-201ENST00000381513 ARID3CA6NKF2 412 aa24.22■■□□□ 1.47
SMARCD1-201ENST00000381513 CENPJQ9HC77 1338 aaPredicted RBP24.22■■□□□ 1.47
SMARCD1-201ENST00000381513 BCORL1Q5H9F3 1711 aa24.2■■□□□ 1.47
SMARCD1-201ENST00000381513 IGHDP01880 384 aa24.19■■□□□ 1.46
SMARCD1-201ENST00000381513 FGD1P98174 961 aa24.18■■□□□ 1.46
SMARCD1-201ENST00000381513 CHMP5Q9NZZ3 219 aa24.16■■□□□ 1.46
SMARCD1-201ENST00000381513 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
SMARCD1-201ENST00000381513 ZHX1Q9UKY1 873 aaPredicted RBP24.14■■□□□ 1.46
SMARCD1-201ENST00000381513 MSNP26038 577 aaKnown RBP24.14■■□□□ 1.45
SMARCD1-201ENST00000381513 CANXP27824 592 aaKnown RBP24.14■■□□□ 1.45
SMARCD1-201ENST00000381513 DUSP27Q5VZP5 1158 aa24.14■■□□□ 1.45
SMARCD1-201ENST00000381513 MAPK8IP3Q9UPT6 1336 aa24.13■■□□□ 1.45
SMARCD1-201ENST00000381513 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
SMARCD1-201ENST00000381513 GOLGA2Q08379 1002 aa24.12■■□□□ 1.45
SMARCD1-201ENST00000381513 PRDM10Q9NQV6 1147 aa24.12■■□□□ 1.45
SMARCD1-201ENST00000381513 R3HCC1Q9Y3T6 440 aaKnown RBP24.12■■□□□ 1.45
SMARCD1-201ENST00000381513 ANP32BQ92688 251 aaKnown RBP24.12■■□□□ 1.45
SMARCD1-201ENST00000381513 DDX11L8A8MPP1 907 aa24.1■■□□□ 1.45
SMARCD1-201ENST00000381513 WDR43Q15061 677 aaKnown RBP eCLIP24.1■■□□□ 1.45
SMARCD1-201ENST00000381513 BCAR3O75815 825 aa24.09■■□□□ 1.45
SMARCD1-201ENST00000381513 TBC1D32Q96NH3 1257 aa24.09■■□□□ 1.45
SMARCD1-201ENST00000381513 RIPK4P57078 832 aa24.07■■□□□ 1.44
SMARCD1-201ENST00000381513 GAS2L3Q86XJ1 694 aa24.07■■□□□ 1.44
SMARCD1-201ENST00000381513 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.07■■□□□ 1.44
SMARCD1-201ENST00000381513 PARD3Q8TEW0 1356 aa24.07■■□□□ 1.44
SMARCD1-201ENST00000381513 PDE4CQ08493 712 aa24.06■■□□□ 1.44
SMARCD1-201ENST00000381513 PKD2Q13563 968 aa24.06■■□□□ 1.44
SMARCD1-201ENST00000381513 MAP7D2Q96T17 732 aa24.06■■□□□ 1.44
SMARCD1-201ENST00000381513 ISY1Q9ULR0 285 aaKnown RBP24.06■■□□□ 1.44
SMARCD1-201ENST00000381513 ZSCAN30Q86W11 494 aa24.05■■□□□ 1.44
SMARCD1-201ENST00000381513 COG6Q9Y2V7 657 aa24.05■■□□□ 1.44
SMARCD1-201ENST00000381513 EFCAB5A4FU69 1503 aa24.04■■□□□ 1.44
SMARCD1-201ENST00000381513 OFD1O75665 1012 aa24.03■■□□□ 1.44
SMARCD1-201ENST00000381513 MFAP1P55081 439 aaKnown RBP24.03■■□□□ 1.44
SMARCD1-201ENST00000381513 SUPT6HQ7KZ85 1726 aaKnown RBP24.02■■□□□ 1.44
SMARCD1-201ENST00000381513 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
SMARCD1-201ENST00000381513 GCC2Q8IWJ2 1684 aa24.01■■□□□ 1.43
SMARCD1-201ENST00000381513 HSCBQ8IWL3 235 aa24.01■■□□□ 1.43
SMARCD1-201ENST00000381513 PLEKHH1Q9ULM0 1364 aa24■■□□□ 1.43
SMARCD1-201ENST00000381513 CLUAP1Q96AJ1 413 aa24■■□□□ 1.43
SMARCD1-201ENST00000381513 PANK1Q8TE04 598 aa23.99■■□□□ 1.43
SMARCD1-201ENST00000381513 NASPP49321 788 aaPredicted RBP23.99■■□□□ 1.43
SMARCD1-201ENST00000381513 CCDC173Q0VFZ6 552 aa23.99■■□□□ 1.43
SMARCD1-201ENST00000381513 UQCRHLA0A096LP55 91 aa23.98■■□□□ 1.43
SMARCD1-201ENST00000381513 UQCRHP07919 91 aa23.98■■□□□ 1.43
SMARCD1-201ENST00000381513 BLMP54132 1417 aaPredicted RBP23.98■■□□□ 1.43
SMARCD1-201ENST00000381513 PANK3Q9H999 370 aa23.98■■□□□ 1.43
SMARCD1-201ENST00000381513 CCDC146Q8IYE0 955 aa23.97■■□□□ 1.43
SMARCD1-201ENST00000381513 EIF3AQ14152 1382 aaKnown RBP23.97■■□□□ 1.43
SMARCD1-201ENST00000381513 C22orf23Q9BZE7 217 aa23.97■■□□□ 1.43
SMARCD1-201ENST00000381513 KDM5CP41229 1560 aa23.96■■□□□ 1.43
SMARCD1-201ENST00000381513 PER1O15534 1290 aaPredicted RBP23.96■■□□□ 1.43
SMARCD1-201ENST00000381513 SMAP1Q8IYB5 467 aaPredicted RBP23.96■■□□□ 1.43
SMARCD1-201ENST00000381513 EHBP1L1Q8N3D4 1523 aa23.96■■□□□ 1.43
SMARCD1-201ENST00000381513 CGNL1Q0VF96 1302 aa23.95■■□□□ 1.42
SMARCD1-201ENST00000381513 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
SMARCD1-201ENST00000381513 ZNF644Q9H582 1327 aaPredicted RBP23.94■■□□□ 1.42
SMARCD1-201ENST00000381513 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
SMARCD1-201ENST00000381513 GBP4Q96PP9 640 aa23.94■■□□□ 1.42
SMARCD1-201ENST00000381513 SLFN5Q08AF3 891 aa23.93■■□□□ 1.42
SMARCD1-201ENST00000381513 ZMYM4Q5VZL5 1548 aa23.93■■□□□ 1.42
SMARCD1-201ENST00000381513 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
SMARCD1-201ENST00000381513 XPCQ01831 940 aaPredicted RBP23.92■■□□□ 1.42
SMARCD1-201ENST00000381513 BBXQ8WY36 941 aaPredicted RBP23.92■■□□□ 1.42
SMARCD1-201ENST00000381513 NLRP1Q9C000 1473 aa23.92■■□□□ 1.42
SMARCD1-201ENST00000381513 PDZRN3Q9UPQ7 1066 aa23.91■■□□□ 1.42
SMARCD1-201ENST00000381513 FOXD4L1Q9NU39 408 aa23.91■■□□□ 1.42
SMARCD1-201ENST00000381513 TCOF1Q13428 1488 aaKnown RBP23.91■■□□□ 1.42
SMARCD1-201ENST00000381513 TNPO1Q92973 898 aaKnown RBP23.91■■□□□ 1.42
SMARCD1-201ENST00000381513 SPINK5Q9NQ38 1064 aaPredicted RBP23.9■■□□□ 1.42
SMARCD1-201ENST00000381513 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.42
SMARCD1-201ENST00000381513 TNNT2P45379 298 aaPredicted RBP23.88■■□□□ 1.41
SMARCD1-201ENST00000381513 MBD5Q9P267 1494 aa23.88■■□□□ 1.41
SMARCD1-201ENST00000381513 HSP90AB1P08238 724 aaKnown RBP23.88■■□□□ 1.41
SMARCD1-201ENST00000381513 SKOR2Q2VWA4 1001 aaPredicted RBP23.87■■□□□ 1.41
SMARCD1-201ENST00000381513 APAF1O14727 1248 aa23.86■■□□□ 1.41
SMARCD1-201ENST00000381513 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
SMARCD1-201ENST00000381513 NCLP19338 710 aaKnown RBP23.86■■□□□ 1.41
SMARCD1-201ENST00000381513 TERF1P54274 439 aa23.86■■□□□ 1.41
SMARCD1-201ENST00000381513 KIAA1107Q9UPP5 1409 aa23.85■■□□□ 1.41
SMARCD1-201ENST00000381513 MTERF4Q7Z6M4 381 aaKnown RBP23.85■■□□□ 1.41
SMARCD1-201ENST00000381513 RALGAPBQ86X10 1494 aa23.85■■□□□ 1.41
SMARCD1-201ENST00000381513 PPP1R9BQ96SB3 815 aa23.84■■□□□ 1.41
SMARCD1-201ENST00000381513 KIF14Q15058 1648 aa23.83■■□□□ 1.41
SMARCD1-201ENST00000381513 DAPK1P53355 1430 aa23.83■■□□□ 1.41
SMARCD1-201ENST00000381513 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
SMARCD1-201ENST00000381513 PDE3AQ14432 1141 aa23.83■■□□□ 1.4
SMARCD1-201ENST00000381513 DDX49Q9Y6V7 483 aaKnown RBP23.83■■□□□ 1.4
SMARCD1-201ENST00000381513 MAGI3Q5TCQ9 1506 aa23.83■■□□□ 1.4
SMARCD1-201ENST00000381513 BCL11BQ9C0K0 894 aaPredicted RBP23.82■■□□□ 1.4
SMARCD1-201ENST00000381513 ZNF777Q9ULD5 760 aaPredicted RBP23.82■■□□□ 1.4
SMARCD1-201ENST00000381513 GOLGA6L22H0YM25 854 aa23.81■■□□□ 1.4
SMARCD1-201ENST00000381513 ROCK1Q13464 1354 aa23.81■■□□□ 1.4
SMARCD1-201ENST00000381513 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
SMARCD1-201ENST00000381513 PCDHB15Q9Y5E8 787 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms