RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
LYSMD4-203ENST00000378904 EIF2AK4Q9P2K8 1649 aaKnown RBP25.3■■□□□ 1.64
LYSMD4-203ENST00000378904 DHX29Q7Z478 1369 aaKnown RBP25.29■■□□□ 1.64
LYSMD4-203ENST00000378904 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
LYSMD4-203ENST00000378904 PPP1R15AO75807 674 aaPredicted RBP25.28■■□□□ 1.64
LYSMD4-203ENST00000378904 RAPGEF3O95398 923 aa25.28■■□□□ 1.64
LYSMD4-203ENST00000378904 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
LYSMD4-203ENST00000378904 ZNF316A6NFI3 1004 aaPredicted RBP25.28■■□□□ 1.64
LYSMD4-203ENST00000378904 ABCA6Q8N139 1617 aa25.25■■□□□ 1.63
LYSMD4-203ENST00000378904 A2MP01023 1474 aa25.24■■□□□ 1.63
LYSMD4-203ENST00000378904 FRMPD1Q5SYB0 1578 aa25.23■■□□□ 1.63
LYSMD4-203ENST00000378904 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
LYSMD4-203ENST00000378904 KIF3BO15066 747 aa25.21■■□□□ 1.63
LYSMD4-203ENST00000378904 MROH1Q8NDA8 1641 aa25.18■■□□□ 1.62
LYSMD4-203ENST00000378904 DIP2CQ9Y2E4 1556 aa25.18■■□□□ 1.62
LYSMD4-203ENST00000378904 PRDM15P57071 1507 aaPredicted RBP25.18■■□□□ 1.62
LYSMD4-203ENST00000378904 VWDEQ8N2E2 1590 aa25.17■■□□□ 1.62
LYSMD4-203ENST00000378904 L3MBTL2Q969R5 705 aa25.16■■□□□ 1.62
LYSMD4-203ENST00000378904 ZMYM4Q5VZL5 1548 aa25.16■■□□□ 1.62
LYSMD4-203ENST00000378904 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
LYSMD4-203ENST00000378904 BCORL1Q5H9F3 1711 aa25.15■■□□□ 1.62
LYSMD4-203ENST00000378904 KANK1Q14678 1352 aa25.14■■□□□ 1.62
LYSMD4-203ENST00000378904 E9PCH4 1651 aa25.14■■□□□ 1.61
LYSMD4-203ENST00000378904 TET3O43151 1660 aa25.14■■□□□ 1.61
LYSMD4-203ENST00000378904 YEATS2Q9ULM3 1422 aa25.11■■□□□ 1.61
LYSMD4-203ENST00000378904 PLA2R1Q13018 1463 aa25.11■■□□□ 1.61
LYSMD4-203ENST00000378904 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
LYSMD4-203ENST00000378904 ATP10AO60312 1499 aa25.08■■□□□ 1.61
LYSMD4-203ENST00000378904 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.6
LYSMD4-203ENST00000378904 CEP152O94986 1710 aa25.06■■□□□ 1.6
LYSMD4-203ENST00000378904 SPHKAPQ2M3C7 1700 aa25.04■■□□□ 1.6
LYSMD4-203ENST00000378904 COL17A1Q9UMD9 1497 aaPredicted RBP25.03■■□□□ 1.6
LYSMD4-203ENST00000378904 LMTK2Q8IWU2 1503 aa25.03■■□□□ 1.6
LYSMD4-203ENST00000378904 DIEXFQ68CQ4 756 aaKnown RBP25.02■■□□□ 1.6
LYSMD4-203ENST00000378904 EFCAB6Q5THR3 1501 aa25.01■■□□□ 1.59
LYSMD4-203ENST00000378904 GGT6Q6P531 493 aa25.01■■□□□ 1.59
LYSMD4-203ENST00000378904 DNAJC5Q9H3Z4 198 aa25■■□□□ 1.59
LYSMD4-203ENST00000378904 TRPM2O94759 1503 aa24.99■■□□□ 1.59
LYSMD4-203ENST00000378904 PTPRTO14522 1441 aa24.98■■□□□ 1.59
LYSMD4-203ENST00000378904 NBPF8Q3BBV2 869 aa24.98■■□□□ 1.59
LYSMD4-203ENST00000378904 REREQ9P2R6 1566 aa24.97■■□□□ 1.59
LYSMD4-203ENST00000378904 ABCC3O15438 1527 aa24.95■■□□□ 1.58
LYSMD4-203ENST00000378904 CLTCL1P53675 1640 aa24.92■■□□□ 1.58
LYSMD4-203ENST00000378904 ARHGEF40Q8TER5 1519 aa24.92■■□□□ 1.58
LYSMD4-203ENST00000378904 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
LYSMD4-203ENST00000378904 CAMSAP1Q5T5Y3 1602 aa24.92■■□□□ 1.58
LYSMD4-203ENST00000378904 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
LYSMD4-203ENST00000378904 UHRF1BP1Q6BDS2 1440 aa24.9■■□□□ 1.58
LYSMD4-203ENST00000378904 DCAF11Q8TEB1 546 aa24.89■■□□□ 1.58
LYSMD4-203ENST00000378904 AGLP35573 1532 aa24.89■■□□□ 1.58
LYSMD4-203ENST00000378904 TRHP20396 242 aaPredicted RBP24.89■■□□□ 1.57
LYSMD4-203ENST00000378904 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 CFAP65Q6ZU64 1925 aaKnown RBP24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 SIGLEC1Q9BZZ2 1709 aa24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 NPATQ14207 1427 aa24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 ZNF326Q5BKZ1 582 aaKnown RBP24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 HIRIP3Q9BW71 556 aaPredicted RBP24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 KDM2AQ9Y2K7 1162 aa24.86■■□□□ 1.57
LYSMD4-203ENST00000378904 SPATA31E1Q6ZUB1 1445 aa24.86■■□□□ 1.57
LYSMD4-203ENST00000378904 UGGT1Q9NYU2 1555 aa24.83■■□□□ 1.57
LYSMD4-203ENST00000378904 KIF1BO60333 1816 aa24.82■■□□□ 1.56
LYSMD4-203ENST00000378904 EIF4G2P78344 907 aaKnown RBP eCLIP24.82■■□□□ 1.56
LYSMD4-203ENST00000378904 RALGAPBQ86X10 1494 aa24.81■■□□□ 1.56
LYSMD4-203ENST00000378904 HSPA5P11021 654 aaKnown RBP24.8■■□□□ 1.56
LYSMD4-203ENST00000378904 ARHGAP31Q2M1Z3 1444 aa24.8■■□□□ 1.56
LYSMD4-203ENST00000378904 NEURL4Q96JN8 1562 aa24.8■■□□□ 1.56
LYSMD4-203ENST00000378904 PRAG1Q86YV5 1406 aa24.79■■□□□ 1.56
LYSMD4-203ENST00000378904 CNTLNQ9NXG0 1405 aa24.79■■□□□ 1.56
LYSMD4-203ENST00000378904 TRPM1Q7Z4N2 1603 aa24.77■■□□□ 1.56
LYSMD4-203ENST00000378904 NOS1P29475 1434 aa24.75■■□□□ 1.55
LYSMD4-203ENST00000378904 MROH2AA6NES4 1674 aa24.74■■□□□ 1.55
LYSMD4-203ENST00000378904 PPP6R1Q9UPN7 881 aa24.74■■□□□ 1.55
LYSMD4-203ENST00000378904 CLTCQ00610 1675 aaKnown RBP24.73■■□□□ 1.55
LYSMD4-203ENST00000378904 SYNMO15061 1565 aa24.72■■□□□ 1.55
LYSMD4-203ENST00000378904 PREX1Q8TCU6 1659 aa24.72■■□□□ 1.55
LYSMD4-203ENST00000378904 PIK3C2BO00750 1634 aa24.71■■□□□ 1.55
LYSMD4-203ENST00000378904 MLECQ14165 292 aa24.7■■□□□ 1.54
LYSMD4-203ENST00000378904 ADGRB3O60242 1522 aa24.7■■□□□ 1.54
LYSMD4-203ENST00000378904 MADDQ8WXG6 1647 aa24.69■■□□□ 1.54
LYSMD4-203ENST00000378904 IFT172Q9UG01 1749 aa24.68■■□□□ 1.54
LYSMD4-203ENST00000378904 ROCK2O75116 1388 aaKnown RBP24.68■■□□□ 1.54
LYSMD4-203ENST00000378904 USP47Q96K76 1375 aa24.68■■□□□ 1.54
LYSMD4-203ENST00000378904 CARD11Q9BXL7 1154 aa24.68■■□□□ 1.54
LYSMD4-203ENST00000378904 STAC3Q96MF2 364 aa24.67■■□□□ 1.54
LYSMD4-203ENST00000378904 DDX10Q13206 875 aaKnown RBP24.65■■□□□ 1.54
LYSMD4-203ENST00000378904 LAMC1P11047 1609 aa24.64■■□□□ 1.53
LYSMD4-203ENST00000378904 ARID4BQ4LE39 1312 aaPredicted RBP24.63■■□□□ 1.53
LYSMD4-203ENST00000378904 CHGAP10645 457 aaKnown RBP24.63■■□□□ 1.53
LYSMD4-203ENST00000378904 MIER1Q8N108 512 aa24.63■■□□□ 1.53
LYSMD4-203ENST00000378904 POLR1AO95602 1720 aaPredicted RBP24.63■■□□□ 1.53
LYSMD4-203ENST00000378904 MYOM2P54296 1465 aa24.62■■□□□ 1.53
LYSMD4-203ENST00000378904 GPRASP1Q5JY77 1395 aa24.62■■□□□ 1.53
LYSMD4-203ENST00000378904 NBPF1Q3BBV0 1214 aa24.62■■□□□ 1.53
LYSMD4-203ENST00000378904 ERVK-7P63135 1459 aa24.61■■□□□ 1.53
LYSMD4-203ENST00000378904 PPLO60437 1756 aa24.61■■□□□ 1.53
LYSMD4-203ENST00000378904 WASHC2AQ641Q2 1341 aa24.6■■□□□ 1.53
LYSMD4-203ENST00000378904 FBXO31Q5XUX0 539 aaPredicted RBP24.59■■□□□ 1.53
LYSMD4-203ENST00000378904 SLC52A1Q9NWF4 448 aa24.59■■□□□ 1.53
LYSMD4-203ENST00000378904 IDI1Q13907 227 aa24.58■■□□□ 1.52
LYSMD4-203ENST00000378904 C11orf95C9JLR9 678 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms