RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.39■■□□□ 1.97
SKI-201ENST00000378536 PANK3Q9H999 370 aa27.38■■□□□ 1.97
SKI-201ENST00000378536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.36■■□□□ 1.971e-6■□□□□ 9.8
SKI-201ENST00000378536 CSB-PGBD3P0DP91 1061 aa27.36■■□□□ 1.97
SKI-201ENST00000378536 CALD1Q05682 793 aaKnown RBP27.35■■□□□ 1.97
SKI-201ENST00000378536 SCAPERQ9BY12 1400 aa27.34■■□□□ 1.97
SKI-201ENST00000378536 PLB1Q6P1J6 1458 aa27.33■■□□□ 1.97
SKI-201ENST00000378536 DAPK1P53355 1430 aa27.33■■□□□ 1.97
SKI-201ENST00000378536 MINK1Q8N4C8 1332 aaPredicted RBP27.32■■□□□ 1.96
SKI-201ENST00000378536 HFM1A2PYH4 1435 aa27.29■■□□□ 1.96
SKI-201ENST00000378536 MYBBP1AQ9BQG0 1328 aaKnown RBP27.29■■□□□ 1.96
SKI-201ENST00000378536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.27■■□□□ 1.963e-7■■■□□ 17.1
SKI-201ENST00000378536 CGNL1Q0VF96 1302 aa27.26■■□□□ 1.95
SKI-201ENST00000378536 CASC1Q6TDU7 716 aa27.26■■□□□ 1.95
SKI-201ENST00000378536 AMPHP49418 695 aa27.25■■□□□ 1.95
SKI-201ENST00000378536 ARHGEF11O15085 1522 aa27.25■■□□□ 1.95
SKI-201ENST00000378536 CENPJQ9HC77 1338 aaPredicted RBP27.23■■□□□ 1.95
SKI-201ENST00000378536 RAPGEF3O95398 923 aa27.22■■□□□ 1.95
SKI-201ENST00000378536 EIF5BO60841 1220 aaKnown RBP27.21■■□□□ 1.95
SKI-201ENST00000378536 KIAA1107Q9UPP5 1409 aa27.21■■□□□ 1.95
SKI-201ENST00000378536 NPHP1O15259 732 aa27.2■■□□□ 1.94
SKI-201ENST00000378536 IPO8O15397 1037 aaKnown RBP27.2■■□□□ 1.94
SKI-201ENST00000378536 RGS3P49796 1198 aa27.2■■□□□ 1.94
SKI-201ENST00000378536 CCDC146Q8IYE0 955 aa27.2■■□□□ 1.94
SKI-201ENST00000378536 BECN1Q14457 450 aa27.2■■□□□ 1.94
SKI-201ENST00000378536 DDRGK1Q96HY6 314 aa27.2■■□□□ 1.94
SKI-201ENST00000378536 COG3Q96JB2 828 aa27.2■■□□□ 1.94
SKI-201ENST00000378536 OS9Q13438 667 aaPredicted RBP27.2■■□□□ 1.94
SKI-201ENST00000378536 RCAN3Q9UKA8 241 aa27.19■■□□□ 1.94
SKI-201ENST00000378536 MAP3K1Q13233 1512 aa27.19■■□□□ 1.94
SKI-201ENST00000378536 KIF14Q15058 1648 aa27.19■■□□□ 1.94
SKI-201ENST00000378536 PRKRIP1Q9H875 184 aaPredicted RBP27.18■■□□□ 1.94
SKI-201ENST00000378536 B4GALNT3Q6L9W6 998 aa27.17■■□□□ 1.94
SKI-201ENST00000378536 GOLGA2Q08379 1002 aa27.16■■□□□ 1.94
SKI-201ENST00000378536 ROCK1Q13464 1354 aa27.15■■□□□ 1.94
SKI-201ENST00000378536 CCDC141Q6ZP82 1450 aa27.14■■□□□ 1.94
SKI-201ENST00000378536 ANP32BQ92688 251 aaKnown RBP27.14■■□□□ 1.94
SKI-201ENST00000378536 CD109Q6YHK3 1445 aa27.13■■□□□ 1.93
SKI-201ENST00000378536 CAMSAP2Q08AD1 1489 aa27.13■■□□□ 1.93
SKI-201ENST00000378536 LMOD3Q0VAK6 560 aa27.13■■□□□ 1.93
SKI-201ENST00000378536 LTV1Q96GA3 475 aaPredicted RBP27.13■■□□□ 1.93
SKI-201ENST00000378536 PDE3BQ13370 1112 aa27.11■■□□□ 1.93
SKI-201ENST00000378536 CCDC7Q96M83 1385 aa27.1■■□□□ 1.93
SKI-201ENST00000378536 TMEM132EQ6IEE7 984 aa27.1■■□□□ 1.93
SKI-201ENST00000378536 CHMP4AQ9BY43 222 aa27.1■■□□□ 1.93
SKI-201ENST00000378536 PTPN23Q9H3S7 1636 aa27.09■■□□□ 1.93
SKI-201ENST00000378536 KIF7Q2M1P5 1343 aa27.09■■□□□ 1.93
SKI-201ENST00000378536 CFAP70Q5T0N1 1121 aa27.07■■□□□ 1.92
SKI-201ENST00000378536 CCDC9Q9Y3X0 531 aaKnown RBP27.06■■□□□ 1.92
SKI-201ENST00000378536 NAIPQ13075 1403 aa27.06■■□□□ 1.92
SKI-201ENST00000378536 SLC52A1Q9NWF4 448 aa27.05■■□□□ 1.92
SKI-201ENST00000378536 STK31Q9BXU1 1019 aa27.04■■□□□ 1.92
SKI-201ENST00000378536 ADGRL1O94910 1474 aa27.02■■□□□ 1.92
SKI-201ENST00000378536 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
SKI-201ENST00000378536 ABCC5O15440 1437 aa27.01■■□□□ 1.91
SKI-201ENST00000378536 TXNDC2Q86VQ3 553 aa27.01■■□□□ 1.91
SKI-201ENST00000378536 ITPRIPQ8IWB1 547 aa27.01■■□□□ 1.91
SKI-201ENST00000378536 SMC4Q9NTJ3 1288 aa27.01■■□□□ 1.91
SKI-201ENST00000378536 ERICH6BQ5W0A0 696 aa27.01■■□□□ 1.91
SKI-201ENST00000378536 NBR1Q14596 966 aa27■■□□□ 1.91
SKI-201ENST00000378536 PSME1Q06323 249 aa26.99■■□□□ 1.91
SKI-201ENST00000378536 POGZQ7Z3K3 1410 aa26.99■■□□□ 1.91
SKI-201ENST00000378536 RRP7AQ9Y3A4 280 aaKnown RBP26.99■■□□□ 1.91
SKI-201ENST00000378536 CABP2Q9NPB3 220 aa26.98■■□□□ 1.91
SKI-201ENST00000378536 CNTLNQ9NXG0 1405 aa26.96■■□□□ 1.91
SKI-201ENST00000378536 THEMISQ8N1K5 641 aaPredicted RBP26.95■■□□□ 1.9
SKI-201ENST00000378536 ZNF330Q9Y3S2 320 aaPredicted RBP26.95■■□□□ 1.9
SKI-201ENST00000378536 ADAMTS12P58397 1594 aa26.95■■□□□ 1.9
SKI-201ENST00000378536 NBPF1Q3BBV0 1214 aa26.94■■□□□ 1.9
SKI-201ENST00000378536 DIAPH1O60610 1272 aaKnown RBP26.94■■□□□ 1.9
SKI-201ENST00000378536 RAPGEF6Q8TEU7 1601 aa26.93■■□□□ 1.9
SKI-201ENST00000378536 AKNAQ7Z591 1439 aa26.93■■□□□ 1.9
SKI-201ENST00000378536 ERBINQ96RT1 1412 aa26.92■■□□□ 1.9
SKI-201ENST00000378536 ATF3P18847 181 aa26.92■■□□□ 1.9
SKI-201ENST00000378536 RWDD1Q9H446 243 aaPredicted RBP26.92■■□□□ 1.9
SKI-201ENST00000378536 RPGRIP1LQ68CZ1 1315 aa26.91■■□□□ 1.9
SKI-201ENST00000378536 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
SKI-201ENST00000378536 WASHC2AQ641Q2 1341 aa26.91■■□□□ 1.9
SKI-201ENST00000378536 NBPF8Q3BBV2 869 aa26.9■■□□□ 1.9
SKI-201ENST00000378536 CTTNBP2Q8WZ74 1663 aa26.9■■□□□ 1.9
SKI-201ENST00000378536 PRAM1Q96QH2 718 aa26.88■■□□□ 1.89
SKI-201ENST00000378536 FANCAO15360 1455 aa26.87■■□□□ 1.89
SKI-201ENST00000378536 WDR62O43379 1518 aa26.87■■□□□ 1.89
SKI-201ENST00000378536 C1orf141Q5JVX7 400 aa26.87■■□□□ 1.89
SKI-201ENST00000378536 ANKRD30BQ9BXX2 1392 aa26.86■■□□□ 1.89
SKI-201ENST00000378536 E9PSI1 815 aa26.86■■□□□ 1.89
SKI-201ENST00000378536 EVA1CP58658 441 aa26.86■■□□□ 1.89
SKI-201ENST00000378536 APBB1O00213 710 aa26.85■■□□□ 1.89
SKI-201ENST00000378536 KCNJ4P48050 445 aa26.85■■□□□ 1.89
SKI-201ENST00000378536 ZBED9Q6R2W3 1325 aa26.85■■□□□ 1.89
SKI-201ENST00000378536 NCLP19338 710 aaKnown RBP26.85■■□□□ 1.89
SKI-201ENST00000378536 GOLGA6L22H0YM25 854 aa26.85■■□□□ 1.89
SKI-201ENST00000378536 GGNBP2Q9H3C7 697 aa26.84■■□□□ 1.89
SKI-201ENST00000378536 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
SKI-201ENST00000378536 APAF1O14727 1248 aa26.84■■□□□ 1.89
SKI-201ENST00000378536 CLUAP1Q96AJ1 413 aa26.84■■□□□ 1.89
SKI-201ENST00000378536 PMFBP1Q8TBY8 1022 aa26.84■■□□□ 1.89
SKI-201ENST00000378536 NCOA1Q15788 1441 aa26.83■■□□□ 1.89
SKI-201ENST00000378536 CFAP44Q96MT7 982 aa26.82■■□□□ 1.88
SKI-201ENST00000378536 ATP10BO94823 1461 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms