RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
EXT1-201ENST00000378204 CHMP3Q9Y3E7 222 aa18.53■□□□□ 0.56
EXT1-201ENST00000378204 PHF14O94880 888 aa18.52■□□□□ 0.56
EXT1-201ENST00000378204 SMARCA2P51531 1590 aa18.52■□□□□ 0.55
EXT1-201ENST00000378204 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
EXT1-201ENST00000378204 KANK4Q5T7N3 995 aaPredicted RBP18.51■□□□□ 0.55
EXT1-201ENST00000378204 IPO9Q96P70 1041 aaKnown RBP18.5■□□□□ 0.55
EXT1-201ENST00000378204 HSP90B1P14625 803 aaKnown RBP18.5■□□□□ 0.55
EXT1-201ENST00000378204 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
EXT1-201ENST00000378204 ST18O60284 1047 aa18.49■□□□□ 0.55
EXT1-201ENST00000378204 KIF3AQ9Y496 699 aa18.49■□□□□ 0.55
EXT1-201ENST00000378204 SLC4A10Q6U841 1118 aa18.48■□□□□ 0.55
EXT1-201ENST00000378204 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
EXT1-201ENST00000378204 TEX35Q5T0J7 233 aa18.47■□□□□ 0.55
EXT1-201ENST00000378204 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
EXT1-201ENST00000378204 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.55
EXT1-201ENST00000378204 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
EXT1-201ENST00000378204 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
EXT1-201ENST00000378204 KIF3BO15066 747 aa18.44■□□□□ 0.54
EXT1-201ENST00000378204 GSE1Q14687 1217 aa18.44■□□□□ 0.54
EXT1-201ENST00000378204 CLUAP1Q96AJ1 413 aa18.44■□□□□ 0.54
EXT1-201ENST00000378204 EID1Q9Y6B2 187 aa18.44■□□□□ 0.54
EXT1-201ENST00000378204 GPS2Q13227 327 aa18.44■□□□□ 0.54
EXT1-201ENST00000378204 CCDC66A2RUB6 948 aa18.44■□□□□ 0.54
EXT1-201ENST00000378204 RASSF8Q8NHQ8 419 aa18.43■□□□□ 0.54
EXT1-201ENST00000378204 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
EXT1-201ENST00000378204 AMPHP49418 695 aa18.43■□□□□ 0.54
EXT1-201ENST00000378204 NGDNQ8NEJ9 315 aaKnown RBP18.43■□□□□ 0.54
EXT1-201ENST00000378204 L3MBTL2Q969R5 705 aa18.43■□□□□ 0.54
EXT1-201ENST00000378204 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
EXT1-201ENST00000378204 ANO8Q9HCE9 1232 aaPredicted RBP18.42■□□□□ 0.54
EXT1-201ENST00000378204 PDE4CQ08493 712 aa18.4■□□□□ 0.54
EXT1-201ENST00000378204 DDX11L8A8MPP1 907 aa18.39■□□□□ 0.53
EXT1-201ENST00000378204 SF3A1Q15459 793 aaKnown RBP18.39■□□□□ 0.53
EXT1-201ENST00000378204 WASHC2CQ9Y4E1 1318 aa18.39■□□□□ 0.53
EXT1-201ENST00000378204 CHMP4CQ96CF2 233 aa18.38■□□□□ 0.53
EXT1-201ENST00000378204 FAM13BQ9NYF5 915 aa18.38■□□□□ 0.53
EXT1-201ENST00000378204 G3V3G9 751 aa18.37■□□□□ 0.53
EXT1-201ENST00000378204 DCAF8Q5TAQ9 597 aa18.37■□□□□ 0.53
EXT1-201ENST00000378204 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.37■□□□□ 0.53
EXT1-201ENST00000378204 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.538e-7■■■□□ 18
EXT1-201ENST00000378204 TPM3P06753 285 aa18.36■□□□□ 0.53
EXT1-201ENST00000378204 CENPQQ7L2Z9 268 aaPredicted RBP18.36■□□□□ 0.53
EXT1-201ENST00000378204 MYBBP1AQ9BQG0 1328 aaKnown RBP18.36■□□□□ 0.53
EXT1-201ENST00000378204 NOL8Q76FK4 1167 aaKnown RBP18.36■□□□□ 0.53
EXT1-201ENST00000378204 CREBRFQ8IUR6 639 aa18.36■□□□□ 0.53
EXT1-201ENST00000378204 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
EXT1-201ENST00000378204 FRAT2O75474 233 aaPredicted RBP18.35■□□□□ 0.53
EXT1-201ENST00000378204 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
EXT1-201ENST00000378204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.531e-6■■■□□ 16.6
EXT1-201ENST00000378204 CEP89Q96ST8 783 aa18.35■□□□□ 0.53
EXT1-201ENST00000378204 WIZO95785 1651 aa18.35■□□□□ 0.53
EXT1-201ENST00000378204 UACAQ9BZF9 1416 aa18.34■□□□□ 0.53
EXT1-201ENST00000378204 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
EXT1-201ENST00000378204 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
EXT1-201ENST00000378204 H3BQV1 296 aa18.33■□□□□ 0.53
EXT1-201ENST00000378204 IFFO2Q5TF58 517 aa18.33■□□□□ 0.53
EXT1-201ENST00000378204 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
EXT1-201ENST00000378204 CWC15Q9P013 229 aaKnown RBP18.33■□□□□ 0.52
EXT1-201ENST00000378204 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.52
EXT1-201ENST00000378204 GTF2E1P29083 439 aaPredicted RBP18.33■□□□□ 0.52
EXT1-201ENST00000378204 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
EXT1-201ENST00000378204 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
EXT1-201ENST00000378204 TAF3Q5VWG9 929 aa18.32■□□□□ 0.52
EXT1-201ENST00000378204 TSR1Q2NL82 804 aaKnown RBP18.32■□□□□ 0.52
EXT1-201ENST00000378204 LTV1Q96GA3 475 aaPredicted RBP18.31■□□□□ 0.52
EXT1-201ENST00000378204 GOLGA6L19H0YKK7 550 aa18.31■□□□□ 0.52
EXT1-201ENST00000378204 RAPGEF2Q9Y4G8 1499 aa18.31■□□□□ 0.52
EXT1-201ENST00000378204 LRRFIP1Q32MZ4 808 aaKnown RBP18.31■□□□□ 0.52
EXT1-201ENST00000378204 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
EXT1-201ENST00000378204 FAM161AQ3B820 660 aa18.3■□□□□ 0.52
EXT1-201ENST00000378204 FAM184AQ8NB25 1140 aa18.3■□□□□ 0.52
EXT1-201ENST00000378204 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
EXT1-201ENST00000378204 TPM2P07951 284 aa18.3■□□□□ 0.52
EXT1-201ENST00000378204 MARCH6O60337 910 aa18.3■□□□□ 0.52
EXT1-201ENST00000378204 ANKRD45Q5TZF3 282 aa18.3■□□□□ 0.52
EXT1-201ENST00000378204 RILPL2Q969X0 211 aa18.3■□□□□ 0.52
EXT1-201ENST00000378204 E9PSI1 815 aa18.3■□□□□ 0.52
EXT1-201ENST00000378204 SKOR2Q2VWA4 1001 aaPredicted RBP18.29■□□□□ 0.52
EXT1-201ENST00000378204 TPD52L1Q16890 204 aaPredicted RBP18.29■□□□□ 0.52
EXT1-201ENST00000378204 ST20-MTHFSA0A0A6YYL1 179 aa18.29■□□□□ 0.52
EXT1-201ENST00000378204 UBE2Q2Q8WVN8 375 aa18.28■□□□□ 0.52
EXT1-201ENST00000378204 PANK3Q9H999 370 aa18.28■□□□□ 0.52
EXT1-201ENST00000378204 RRP9O43818 475 aaKnown RBP18.27■□□□□ 0.52
EXT1-201ENST00000378204 ZKSCAN2Q63HK3 967 aa18.27■□□□□ 0.52
EXT1-201ENST00000378204 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.52
EXT1-201ENST00000378204 PES1O00541 588 aaKnown RBP18.27■□□□□ 0.52
EXT1-201ENST00000378204 AKAP17AQ02040 695 aaKnown RBP18.27■□□□□ 0.52
EXT1-201ENST00000378204 RRP7AQ9Y3A4 280 aaKnown RBP18.27■□□□□ 0.52
EXT1-201ENST00000378204 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.51
EXT1-201ENST00000378204 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.51
EXT1-201ENST00000378204 FAM43AQ8N2R8 423 aa18.27■□□□□ 0.51
EXT1-201ENST00000378204 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.51
EXT1-201ENST00000378204 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
EXT1-201ENST00000378204 FOXD4L5Q5VV16 416 aaPredicted RBP18.26■□□□□ 0.51
EXT1-201ENST00000378204 FOXD4L4Q8WXT5 416 aaPredicted RBP18.26■□□□□ 0.51
EXT1-201ENST00000378204 PRM3Q9NNZ6 103 aa18.26■□□□□ 0.51
EXT1-201ENST00000378204 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
EXT1-201ENST00000378204 C1orf141Q5JVX7 400 aa18.25■□□□□ 0.51
EXT1-201ENST00000378204 BECN2A8MW95 431 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms